RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 HS3ST1O14792 307 aa16.58■□□□□ 0.24
CAPN1-226ENST00000533820 GDF1P27539 372 aa16.58■□□□□ 0.24
CAPN1-226ENST00000533820 CLDN15P56746 228 aa16.58■□□□□ 0.24
CAPN1-226ENST00000533820 C1QL4Q86Z23 238 aa16.58■□□□□ 0.24
CAPN1-226ENST00000533820 SELENOHQ8IZQ5 122 aaKnown RBP16.58■□□□□ 0.24
CAPN1-226ENST00000533820 CYB561D1Q8N8Q1 229 aa16.58■□□□□ 0.24
CAPN1-226ENST00000533820 RNASE8Q8TDE3 154 aaKnown RBP16.58■□□□□ 0.24
CAPN1-226ENST00000533820 RAB39BQ96DA2 213 aa16.58■□□□□ 0.24
CAPN1-226ENST00000533820 UCP2P55851 309 aa16.57■□□□□ 0.24
CAPN1-226ENST00000533820 MLF1P58340 268 aa16.57■□□□□ 0.24
CAPN1-226ENST00000533820 UBE2KP61086 200 aa16.57■□□□□ 0.24
CAPN1-226ENST00000533820 ASCL4Q6XD76 172 aa16.57■□□□□ 0.24
CAPN1-226ENST00000533820 TDHQ8IZJ6 230 aa16.57■□□□□ 0.24
CAPN1-226ENST00000533820 C17orf78Q8N4C9 275 aa16.57■□□□□ 0.24
CAPN1-226ENST00000533820 IL1F10Q8WWZ1 152 aa16.57■□□□□ 0.24
CAPN1-226ENST00000533820 RDH5Q92781 318 aa16.57■□□□□ 0.24
CAPN1-226ENST00000533820 NOL4LQ96MY1 436 aaPredicted RBP16.57■□□□□ 0.24
CAPN1-226ENST00000533820 C5orf49A4QMS7 147 aa16.57■□□□□ 0.24
CAPN1-226ENST00000533820 GJE1A6NN92 205 aa16.57■□□□□ 0.24
CAPN1-226ENST00000533820 CXCL1P09341 107 aa16.57■□□□□ 0.24
CAPN1-226ENST00000533820 CLN3Q13286 438 aa16.57■□□□□ 0.24
CAPN1-226ENST00000533820 ZNF266Q14584 549 aa16.57■□□□□ 0.24
CAPN1-226ENST00000533820 HERPUD1Q15011 391 aa16.57■□□□□ 0.24
CAPN1-226ENST00000533820 NCR3LG1Q68D85 454 aa16.57■□□□□ 0.24
CAPN1-226ENST00000533820 SLC25A24Q6NUK1 477 aa16.57■□□□□ 0.24
CAPN1-226ENST00000533820 SPSB3Q6PJ21 355 aa16.57■□□□□ 0.24
CAPN1-226ENST00000533820 PARD6GQ9BYG4 376 aaPredicted RBP16.57■□□□□ 0.24
CAPN1-226ENST00000533820 WDR54Q9H977 334 aa16.57■□□□□ 0.24
CAPN1-226ENST00000533820 ARHGAP21Q5T5U3 1957 aa16.57■□□□□ 0.24
CAPN1-226ENST00000533820 GZMBP10144 247 aa16.56■□□□□ 0.24
CAPN1-226ENST00000533820 HNF1AP20823 631 aa16.56■□□□□ 0.24
CAPN1-226ENST00000533820 RHEBQ15382 184 aa16.56■□□□□ 0.24
CAPN1-226ENST00000533820 TMEM211Q6ICI0 200 aa16.56■□□□□ 0.24
CAPN1-226ENST00000533820 BEND2Q8NDZ0 799 aa16.56■□□□□ 0.24
CAPN1-226ENST00000533820 SVIPQ8NHG7 77 aa16.56■□□□□ 0.24
CAPN1-226ENST00000533820 FGF23Q9GZV9 251 aaPredicted RBP16.56■□□□□ 0.24
CAPN1-226ENST00000533820 PLEKHF2Q9H8W4 249 aa16.56■□□□□ 0.24
CAPN1-226ENST00000533820 DEPPQ9NTK1 212 aa16.56■□□□□ 0.24
CAPN1-226ENST00000533820 KIAA1549Q9HCM3 1950 aa16.56■□□□□ 0.24
CAPN1-226ENST00000533820 IL18BPO95998 194 aa16.56■□□□□ 0.24
CAPN1-226ENST00000533820 TMEM267Q0VDI3 215 aaPredicted RBP16.56■□□□□ 0.24
CAPN1-226ENST00000533820 ZNF100Q8IYN0 542 aa16.56■□□□□ 0.24
CAPN1-226ENST00000533820 PINLYPA6NC86 204 aa16.56■□□□□ 0.24
CAPN1-226ENST00000533820 B4E171 279 aa16.56■□□□□ 0.24
CAPN1-226ENST00000533820 FGF5P12034 268 aa16.56■□□□□ 0.24
CAPN1-226ENST00000533820 PLA2G5P39877 138 aa16.56■□□□□ 0.24
CAPN1-226ENST00000533820 PRDX4Q13162 271 aa16.56■□□□□ 0.24
CAPN1-226ENST00000533820 VASH2Q86V25 355 aa16.56■□□□□ 0.24
CAPN1-226ENST00000533820 OR2Y1Q8NGV0 311 aa16.56■□□□□ 0.24
CAPN1-226ENST00000533820 DIRC2Q96SL1 478 aa16.56■□□□□ 0.24
CAPN1-226ENST00000533820 HIST1H2BLQ99880 126 aa16.56■□□□□ 0.24
CAPN1-226ENST00000533820 SF3B5Q9BWJ5 86 aaKnown RBP16.56■□□□□ 0.24
CAPN1-226ENST00000533820 DOCK10Q96BY6 2186 aa16.55■□□□□ 0.24
CAPN1-226ENST00000533820 SLC22A20A6NK97 555 aa16.55■□□□□ 0.24
CAPN1-226ENST00000533820 FOLR3P41439 243 aa16.55■□□□□ 0.24
CAPN1-226ENST00000533820 SYNGR1O43759 233 aa16.55■□□□□ 0.24
CAPN1-226ENST00000533820 PTBP3O95758 552 aaKnown RBP16.55■□□□□ 0.24
CAPN1-226ENST00000533820 NGFP01138 241 aa16.55■□□□□ 0.24
CAPN1-226ENST00000533820 UCP3P55916 312 aa16.55■□□□□ 0.24
CAPN1-226ENST00000533820 BATFQ16520 125 aa16.55■□□□□ 0.24
CAPN1-226ENST00000533820 VHLLQ6RSH7 139 aa16.55■□□□□ 0.24
CAPN1-226ENST00000533820 OR2V1Q8NHB1 315 aa16.55■□□□□ 0.24
CAPN1-226ENST00000533820 CALHM2Q9HA72 323 aa16.55■□□□□ 0.24
CAPN1-226ENST00000533820 ZNF732B4DXR9 585 aa16.54■□□□□ 0.24
CAPN1-226ENST00000533820 RPL36A-HNRNPH2H7BZ11 118 aa16.54■□□□□ 0.24
CAPN1-226ENST00000533820 CYB5BO43169 146 aa16.54■□□□□ 0.24
CAPN1-226ENST00000533820 CDS2O95674 445 aa16.54■□□□□ 0.24
CAPN1-226ENST00000533820 DLK1P80370 383 aa16.54■□□□□ 0.24
CAPN1-226ENST00000533820 ARF1P84077 181 aaKnown RBP16.54■□□□□ 0.24
CAPN1-226ENST00000533820 Q0VFX4 171 aa16.54■□□□□ 0.24
CAPN1-226ENST00000533820 OR8B8Q15620 311 aa16.54■□□□□ 0.24
CAPN1-226ENST00000533820 SPINK14Q6IE38 97 aa16.54■□□□□ 0.24
CAPN1-226ENST00000533820 ODF3L1Q8IXM7 274 aa16.54■□□□□ 0.24
CAPN1-226ENST00000533820 IL22RA1Q8N6P7 574 aa16.54■□□□□ 0.24
CAPN1-226ENST00000533820 SH2D2AQ9NP31 389 aa16.54■□□□□ 0.24
CAPN1-226ENST00000533820 TGIF2-C20orf24A0A0A6YYL0 155 aa16.54■□□□□ 0.24
CAPN1-226ENST00000533820 IGKV1-6A0A0C4DH72 117 aa16.54■□□□□ 0.24
CAPN1-226ENST00000533820 A0A0G2JRQ6 117 aa16.54■□□□□ 0.24
CAPN1-226ENST00000533820 LINC00614P0C842 121 aa16.54■□□□□ 0.24
CAPN1-226ENST00000533820 SRD5A2P31213 254 aa16.54■□□□□ 0.24
CAPN1-226ENST00000533820 RPL29P47914 159 aaKnown RBP16.54■□□□□ 0.24
CAPN1-226ENST00000533820 C20orf204Q6ZNR8 217 aa16.54■□□□□ 0.24
CAPN1-226ENST00000533820 ZNF429Q86V71 674 aa16.54■□□□□ 0.24
CAPN1-226ENST00000533820 OR5R1Q8NH85 324 aa16.54■□□□□ 0.24
CAPN1-226ENST00000533820 LYRM2Q9NU23 88 aaPredicted RBP16.54■□□□□ 0.24
CAPN1-226ENST00000533820 MTCH1Q9NZJ7 389 aa16.54■□□□□ 0.24
CAPN1-226ENST00000533820 TGOLN2O43493 480 aa16.54■□□□□ 0.24
CAPN1-226ENST00000533820 IL11RAQ14626 422 aa16.54■□□□□ 0.24
CAPN1-226ENST00000533820 RNF151Q2KHN1 245 aa16.54■□□□□ 0.24
CAPN1-226ENST00000533820 LFNGQ8NES3 379 aa16.54■□□□□ 0.24
CAPN1-226ENST00000533820 M1APQ8TC57 530 aa16.54■□□□□ 0.24
CAPN1-226ENST00000533820 SNX22Q96L94 193 aa16.54■□□□□ 0.24
CAPN1-226ENST00000533820 TRGC1P0CF51 173 aa16.53■□□□□ 0.24
CAPN1-226ENST00000533820 ZNF16P17020 682 aaPredicted RBP16.53■□□□□ 0.24
CAPN1-226ENST00000533820 RPL23AP62750 156 aaKnown RBP16.53■□□□□ 0.24
CAPN1-226ENST00000533820 RBX1P62877 108 aa16.53■□□□□ 0.24
CAPN1-226ENST00000533820 CMTM1Q8IZ96 169 aa16.53■□□□□ 0.24
CAPN1-226ENST00000533820 C22orf15Q8WYQ4 148 aa16.53■□□□□ 0.24
CAPN1-226ENST00000533820 PRRG4Q9BZD6 226 aa16.53■□□□□ 0.24
CAPN1-226ENST00000533820 Q9N2K0 584 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms