RNA–Protein interactions for RNA: ENST00000533774.5

SVIP-205, Transcript of small VCP interacting protein, humanhuman

TSL 3

Gene SVIP, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-205ENST00000533774 CRIP2P52943 208 aaPredicted RBP9.31□□□□□ -0.92
SVIP-205ENST00000533774 ACTBP60709 375 aa9.31□□□□□ -0.92
SVIP-205ENST00000533774 TAGLNQ01995 201 aaKnown RBP9.31□□□□□ -0.92
SVIP-205ENST00000533774 RAB40BQ12829 278 aa9.31□□□□□ -0.92
SVIP-205ENST00000533774 LRRC36Q1X8D7 754 aa9.31□□□□□ -0.92
SVIP-205ENST00000533774 SLC25A48Q6ZT89 311 aaKnown RBP9.31□□□□□ -0.92
SVIP-205ENST00000533774 CCDC54Q8NEL0 328 aa9.31□□□□□ -0.92
SVIP-205ENST00000533774 SPSB1Q96BD6 273 aa9.31□□□□□ -0.92
SVIP-205ENST00000533774 MS4A10Q96PG2 267 aa9.31□□□□□ -0.92
SVIP-205ENST00000533774 KRTAP4-5Q9BYR2 181 aa9.31□□□□□ -0.92
SVIP-205ENST00000533774 BARHL1Q9BZE3 327 aa9.31□□□□□ -0.92
SVIP-205ENST00000533774 WFDC10AQ9H1F0 79 aa9.31□□□□□ -0.92
SVIP-205ENST00000533774 NEK6Q9HC98 313 aa9.31□□□□□ -0.92
SVIP-205ENST00000533774 FOXA2Q9Y261 457 aaPredicted RBP9.31□□□□□ -0.92
SVIP-205ENST00000533774 NUBP2Q9Y5Y2 271 aa9.31□□□□□ -0.92
SVIP-205ENST00000533774 DNAH2Q9P225 4427 aa9.31□□□□□ -0.92
SVIP-205ENST00000533774 A0A1W2PQL4 384 aaPredicted RBP9.3□□□□□ -0.92
SVIP-205ENST00000533774 SHISA3A0PJX4 238 aa9.3□□□□□ -0.92
SVIP-205ENST00000533774 METTL15A6NJ78 407 aa9.3□□□□□ -0.92
SVIP-205ENST00000533774 APOL3O95236 402 aa9.3□□□□□ -0.92
SVIP-205ENST00000533774 KRT8P05787 483 aa9.3□□□□□ -0.92
SVIP-205ENST00000533774 C5orf64Q2M2E5 130 aa9.3□□□□□ -0.92
SVIP-205ENST00000533774 PIGYQ3MUY2 71 aa9.3□□□□□ -0.92
SVIP-205ENST00000533774 CT45A1Q5HYN5 189 aa9.3□□□□□ -0.92
SVIP-205ENST00000533774 AADACL4Q5VUY2 407 aa9.3□□□□□ -0.92
SVIP-205ENST00000533774 OR51A4Q8NGJ6 313 aa9.3□□□□□ -0.92
SVIP-205ENST00000533774 OR52M1Q8NGK5 317 aa9.3□□□□□ -0.92
SVIP-205ENST00000533774 OR13C9Q8NGT0 318 aa9.3□□□□□ -0.92
SVIP-205ENST00000533774 CT45A3Q8NHU0 189 aa9.3□□□□□ -0.92
SVIP-205ENST00000533774 ARL11Q969Q4 196 aa9.3□□□□□ -0.92
SVIP-205ENST00000533774 UTP4Q969X6 686 aaKnown RBP9.3□□□□□ -0.92
SVIP-205ENST00000533774 TMEM106AQ96A25 262 aa9.3□□□□□ -0.92
SVIP-205ENST00000533774 RHOFQ9HBH0 211 aa9.3□□□□□ -0.92
SVIP-205ENST00000533774 A3GALT2U3KPV4 340 aa9.3□□□□□ -0.92
SVIP-205ENST00000533774 CXorf65A6NEN9 183 aa9.29□□□□□ -0.92
SVIP-205ENST00000533774 H0Y980 276 aa9.29□□□□□ -0.92
SVIP-205ENST00000533774 MT-ND2P03891 347 aa9.29□□□□□ -0.92
SVIP-205ENST00000533774 CSN3P07498 182 aa9.29□□□□□ -0.92
SVIP-205ENST00000533774 TMEM225BP0DP42 221 aa9.29□□□□□ -0.92
SVIP-205ENST00000533774 VAMP1P23763 118 aa9.29□□□□□ -0.92
SVIP-205ENST00000533774 IL3RAP26951 378 aa9.29□□□□□ -0.92
SVIP-205ENST00000533774 EFNB1P98172 346 aa9.29□□□□□ -0.92
SVIP-205ENST00000533774 MS4A2Q01362 244 aa9.29□□□□□ -0.92
SVIP-205ENST00000533774 KLF5Q13887 457 aaPredicted RBP9.29□□□□□ -0.92
SVIP-205ENST00000533774 ZSCAN26Q16670 478 aa9.29□□□□□ -0.92
SVIP-205ENST00000533774 ELP2Q6IA86 826 aa9.29□□□□□ -0.92
SVIP-205ENST00000533774 GTSCR1Q86UQ5 136 aa9.29□□□□□ -0.92
SVIP-205ENST00000533774 DEFB107AQ8IZN7 70 aa9.29□□□□□ -0.92
SVIP-205ENST00000533774 DEFB125Q8N687 156 aa9.29□□□□□ -0.92
SVIP-205ENST00000533774 SUMF2Q8NBJ7 301 aa9.29□□□□□ -0.92
SVIP-205ENST00000533774 CCDC107Q8WV48 283 aa9.29□□□□□ -0.92
SVIP-205ENST00000533774 FAM118AQ9NWS6 357 aa9.29□□□□□ -0.92
SVIP-205ENST00000533774 GAB2Q9UQC2 676 aa9.29□□□□□ -0.92
SVIP-205ENST00000533774 FCN1O00602 326 aa9.28□□□□□ -0.92
SVIP-205ENST00000533774 NBR2O15453 112 aa9.28□□□□□ -0.92
SVIP-205ENST00000533774 TXNL1O43396 289 aa9.28□□□□□ -0.92
SVIP-205ENST00000533774 CST1P01037 141 aa9.28□□□□□ -0.92
SVIP-205ENST00000533774 CD7P09564 240 aa9.28□□□□□ -0.92
SVIP-205ENST00000533774 UBCP0CG48 685 aaKnown RBP9.28□□□□□ -0.92
SVIP-205ENST00000533774 ZNF20P17024 532 aa9.28□□□□□ -0.92
SVIP-205ENST00000533774 MECP2P51608 486 aaKnown RBP9.28□□□□□ -0.92
SVIP-205ENST00000533774 CRISP1P54107 249 aa9.28□□□□□ -0.92
SVIP-205ENST00000533774 TP53I3Q53FA7 332 aa9.28□□□□□ -0.92
SVIP-205ENST00000533774 LIN54Q6MZP7 749 aa9.28□□□□□ -0.92
SVIP-205ENST00000533774 CEMP1Q6PRD7 247 aaPredicted RBP9.28□□□□□ -0.92
SVIP-205ENST00000533774 OR9G4Q8NGQ1 327 aa9.28□□□□□ -0.92
SVIP-205ENST00000533774 OR10K1Q8NGX5 313 aa9.28□□□□□ -0.92
SVIP-205ENST00000533774 LRGUKQ96M69 825 aa9.28□□□□□ -0.92
SVIP-205ENST00000533774 DPCDQ9BVM2 203 aaPredicted RBP9.28□□□□□ -0.92
SVIP-205ENST00000533774 DNAH11Q96DT5 4516 aa9.27□□□□□ -0.93
SVIP-205ENST00000533774 TMEM238LA0A1B0GVL6 79 aa9.27□□□□□ -0.93
SVIP-205ENST00000533774 LANCL1O43813 399 aa9.27□□□□□ -0.93
SVIP-205ENST00000533774 NDUFA3O95167 84 aa9.27□□□□□ -0.93
SVIP-205ENST00000533774 GZMHP20718 246 aa9.27□□□□□ -0.93
SVIP-205ENST00000533774 SYNJ2BPP57105 145 aa9.27□□□□□ -0.93
SVIP-205ENST00000533774 TPPP2P59282 170 aa9.27□□□□□ -0.93
SVIP-205ENST00000533774 CD81P60033 236 aa9.27□□□□□ -0.93
SVIP-205ENST00000533774 NANOS3P60323 173 aaKnown RBP9.27□□□□□ -0.93
SVIP-205ENST00000533774 CX3CL1P78423 397 aa9.27□□□□□ -0.93
SVIP-205ENST00000533774 GK3PQ14409 553 aa9.27□□□□□ -0.93
SVIP-205ENST00000533774 IL13RA2Q14627 380 aa9.27□□□□□ -0.93
SVIP-205ENST00000533774 KISS1Q15726 138 aa9.27□□□□□ -0.93
SVIP-205ENST00000533774 FAM98BQ52LJ0 330 aaKnown RBP9.27□□□□□ -0.93
SVIP-205ENST00000533774 C5orf24Q7Z6I8 188 aa9.27□□□□□ -0.93
SVIP-205ENST00000533774 ODF3L1Q8IXM7 274 aa9.27□□□□□ -0.93
SVIP-205ENST00000533774 TCEANCQ8N8B7 351 aa9.27□□□□□ -0.93
SVIP-205ENST00000533774 NPBQ8NG41 125 aa9.27□□□□□ -0.93
SVIP-205ENST00000533774 OR10V1Q8NGI7 309 aa9.27□□□□□ -0.93
SVIP-205ENST00000533774 OR2G2Q8NGZ5 317 aa9.27□□□□□ -0.93
SVIP-205ENST00000533774 ZNF251Q9BRH9 671 aa9.27□□□□□ -0.93
SVIP-205ENST00000533774 OVOL2Q9BRP0 275 aa9.27□□□□□ -0.93
SVIP-205ENST00000533774 FAM103A1Q9BTL3 118 aaKnown RBP9.27□□□□□ -0.93
SVIP-205ENST00000533774 MRPL20Q9BYC9 149 aaKnown RBP9.27□□□□□ -0.93
SVIP-205ENST00000533774 ARL8BQ9NVJ2 186 aa9.27□□□□□ -0.93
SVIP-205ENST00000533774 CNOT2Q9NZN8 540 aaKnown RBP9.27□□□□□ -0.93
SVIP-205ENST00000533774 ANKRD34BA5PLL1 514 aa9.26□□□□□ -0.93
SVIP-205ENST00000533774 NUPR2A6NF83 97 aa9.26□□□□□ -0.93
SVIP-205ENST00000533774 ZNF785A8K8V0 405 aa9.26□□□□□ -0.93
SVIP-205ENST00000533774 ARPC1BO15143 372 aaKnown RBP9.26□□□□□ -0.93
SVIP-205ENST00000533774 SULT1C4O75897 302 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms