RNA–Protein interactions for RNA: ENST00000533667.5

CTNND1-236, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-236ENST00000533667 SLC25A40Q8TBP6 338 aa6.14□□□□□ -1.43
CTNND1-236ENST00000533667 BLNKQ8WV28 456 aa6.14□□□□□ -1.43
CTNND1-236ENST00000533667 CCL17Q92583 94 aa6.14□□□□□ -1.43
CTNND1-236ENST00000533667 GPA33Q99795 319 aa6.14□□□□□ -1.43
CTNND1-236ENST00000533667 DUSP15Q9H1R2 295 aaPredicted RBP6.14□□□□□ -1.43
CTNND1-236ENST00000533667 FAM206AQ9NX38 181 aa6.14□□□□□ -1.43
CTNND1-236ENST00000533667 TRBV5-5A0A0J9YX44 114 aa6.13□□□□□ -1.43
CTNND1-236ENST00000533667 A0A1W2PPC1 479 aa6.13□□□□□ -1.43
CTNND1-236ENST00000533667 ZNF716A6NP11 495 aa6.13□□□□□ -1.43
CTNND1-236ENST00000533667 PPIHO43447 177 aaKnown RBP6.13□□□□□ -1.43
CTNND1-236ENST00000533667 SMPD2O60906 423 aa6.13□□□□□ -1.43
CTNND1-236ENST00000533667 PATE4P0C8F1 98 aa6.13□□□□□ -1.43
CTNND1-236ENST00000533667 CTSSP25774 331 aa6.13□□□□□ -1.43
CTNND1-236ENST00000533667 HOXA6P31267 233 aa6.13□□□□□ -1.43
CTNND1-236ENST00000533667 LSM11P83369 360 aaKnown RBP eCLIP6.13□□□□□ -1.43
CTNND1-236ENST00000533667 FAM27BQ5VT28 67 aa6.13□□□□□ -1.43
CTNND1-236ENST00000533667 LYPD8Q6UX82 237 aa6.13□□□□□ -1.43
CTNND1-236ENST00000533667 C16orf47Q6ZP98 133 aaPredicted RBP6.13□□□□□ -1.43
CTNND1-236ENST00000533667 ZNF721Q8TF20 911 aa6.13□□□□□ -1.43
CTNND1-236ENST00000533667 PLPPR2Q96GM1 343 aa6.13□□□□□ -1.43
CTNND1-236ENST00000533667 RSRP1Q9BUV0 290 aa6.13□□□□□ -1.43
CTNND1-236ENST00000533667 H3BQ15 152 aa6.13□□□□□ -1.43
CTNND1-236ENST00000533667 ITGB1BP1O14713 200 aa6.13□□□□□ -1.43
CTNND1-236ENST00000533667 SEMA7AO75326 666 aa6.13□□□□□ -1.43
CTNND1-236ENST00000533667 P01737 135 aa6.13□□□□□ -1.43
CTNND1-236ENST00000533667 TMEM50BP56557 158 aa6.13□□□□□ -1.43
CTNND1-236ENST00000533667 ERVS71-1P61550 626 aa6.13□□□□□ -1.43
CTNND1-236ENST00000533667 LYZP61626 148 aa6.13□□□□□ -1.43
CTNND1-236ENST00000533667 ROM1Q03395 351 aa6.13□□□□□ -1.43
CTNND1-236ENST00000533667 TNXAQ16473 311 aa6.13□□□□□ -1.43
CTNND1-236ENST00000533667 ZNF343Q6P1L6 599 aa6.13□□□□□ -1.43
CTNND1-236ENST00000533667 ZAR1Q86SH2 424 aa6.13□□□□□ -1.43
CTNND1-236ENST00000533667 TUSC5Q8IXB3 177 aa6.13□□□□□ -1.43
CTNND1-236ENST00000533667 GMPPAQ96IJ6 420 aaPredicted RBP6.13□□□□□ -1.43
CTNND1-236ENST00000533667 RSG1Q9BU20 258 aa6.13□□□□□ -1.43
CTNND1-236ENST00000533667 DNAJC4Q9NNZ3 241 aa6.13□□□□□ -1.43
CTNND1-236ENST00000533667 KCNK7Q9Y2U2 307 aa6.13□□□□□ -1.43
CTNND1-236ENST00000533667 KIAA0100Q14667 2235 aaKnown RBP6.13□□□□□ -1.43
CTNND1-236ENST00000533667 A0A1W2PR80 420 aa6.13□□□□□ -1.43
CTNND1-236ENST00000533667 NKX2-6A6NCS4 301 aa6.13□□□□□ -1.43
CTNND1-236ENST00000533667 ISLRO14498 428 aa6.13□□□□□ -1.43
CTNND1-236ENST00000533667 FOXS1O43638 330 aa6.13□□□□□ -1.43
CTNND1-236ENST00000533667 MPDU1O75352 247 aa6.13□□□□□ -1.43
CTNND1-236ENST00000533667 HIST1H1EP10412 219 aaKnown RBP6.13□□□□□ -1.43
CTNND1-236ENST00000533667 ORM2P19652 201 aa6.13□□□□□ -1.43
CTNND1-236ENST00000533667 LGALS7P47929 136 aa6.13□□□□□ -1.43
CTNND1-236ENST00000533667 RBM11P57052 281 aaKnown RBP6.13□□□□□ -1.43
CTNND1-236ENST00000533667 PSG5Q15238 335 aa6.13□□□□□ -1.43
CTNND1-236ENST00000533667 CD200R1LQ6Q8B3 271 aa6.13□□□□□ -1.43
CTNND1-236ENST00000533667 TEPPQ6URK8 271 aa6.13□□□□□ -1.43
CTNND1-236ENST00000533667 C9orf40Q8IXQ3 194 aa6.13□□□□□ -1.43
CTNND1-236ENST00000533667 OR8B3Q8NGG8 313 aa6.13□□□□□ -1.43
CTNND1-236ENST00000533667 GTF3AQ92664 365 aaKnown RBP6.13□□□□□ -1.43
CTNND1-236ENST00000533667 OR8B2Q96RD0 313 aa6.13□□□□□ -1.43
CTNND1-236ENST00000533667 PRSS27Q9BQR3 290 aa6.13□□□□□ -1.43
CTNND1-236ENST00000533667 DOK5Q9P104 306 aa6.13□□□□□ -1.43
CTNND1-236ENST00000533667 VSIG4Q9Y279 399 aa6.13□□□□□ -1.43
CTNND1-236ENST00000533667 CCL2P13500 99 aa6.13□□□□□ -1.43
CTNND1-236ENST00000533667 TRIP6Q15654 476 aaKnown RBP6.13□□□□□ -1.43
CTNND1-236ENST00000533667 TSPO2Q5TGU0 170 aa6.13□□□□□ -1.43
CTNND1-236ENST00000533667 CBLN2Q8IUK8 224 aa6.13□□□□□ -1.43
CTNND1-236ENST00000533667 OR5AU1Q8NGC0 362 aa6.13□□□□□ -1.43
CTNND1-236ENST00000533667 OR1B1Q8NGR6 318 aa6.13□□□□□ -1.43
CTNND1-236ENST00000533667 OR1L8Q8NGR8 309 aa6.13□□□□□ -1.43
CTNND1-236ENST00000533667 ADAMTS17Q8TE56 1095 aa6.13□□□□□ -1.43
CTNND1-236ENST00000533667 CFHR5Q9BXR6 569 aa6.13□□□□□ -1.43
CTNND1-236ENST00000533667 MAP1LC3CQ9BXW4 147 aa6.13□□□□□ -1.43
CTNND1-236ENST00000533667 RAB33BQ9H082 229 aa6.13□□□□□ -1.43
CTNND1-236ENST00000533667 VCX2Q9H322 139 aa6.13□□□□□ -1.43
CTNND1-236ENST00000533667 HEXA-AS1Q9H8Q6 139 aa6.13□□□□□ -1.43
CTNND1-236ENST00000533667 HELTA6NFD8 242 aa6.12□□□□□ -1.43
CTNND1-236ENST00000533667 C3orf80F5H4A9 247 aa6.12□□□□□ -1.43
CTNND1-236ENST00000533667 NPIPB9F8W1W9 429 aa6.12□□□□□ -1.43
CTNND1-236ENST00000533667 CDIPTO14735 213 aa6.12□□□□□ -1.43
CTNND1-236ENST00000533667 SYNGR1O43759 233 aa6.12□□□□□ -1.43
CTNND1-236ENST00000533667 ISG15P05161 165 aa6.12□□□□□ -1.43
CTNND1-236ENST00000533667 PEBP1P30086 187 aaKnown RBP6.12□□□□□ -1.43
CTNND1-236ENST00000533667 KIR3DL2P43630 455 aa6.12□□□□□ -1.43
CTNND1-236ENST00000533667 FAM3BP58499 235 aaPredicted RBP6.12□□□□□ -1.43
CTNND1-236ENST00000533667 HERVK_113P61574 105 aa6.12□□□□□ -1.43
CTNND1-236ENST00000533667 TNFRSF9Q07011 255 aa6.12□□□□□ -1.43
CTNND1-236ENST00000533667 FBXW9Q5XUX1 488 aa6.12□□□□□ -1.43
CTNND1-236ENST00000533667 SLC23A3Q6PIS1 610 aa6.12□□□□□ -1.43
CTNND1-236ENST00000533667 LYZL2Q7Z4W2 148 aa6.12□□□□□ -1.43
CTNND1-236ENST00000533667 OR4B1Q8NGF8 309 aa6.12□□□□□ -1.43
CTNND1-236ENST00000533667 OR4P4Q8NGL7 312 aa6.12□□□□□ -1.43
CTNND1-236ENST00000533667 SP7Q8TDD2 431 aaPredicted RBP6.12□□□□□ -1.43
CTNND1-236ENST00000533667 IL22RA2Q969J5 263 aa6.12□□□□□ -1.43
CTNND1-236ENST00000533667 ADAT3Q96EY9 351 aaPredicted RBP6.12□□□□□ -1.43
CTNND1-236ENST00000533667 PGLYRP3Q96LB9 341 aa6.12□□□□□ -1.43
CTNND1-236ENST00000533667 C2orf88Q9BSF0 95 aa6.12□□□□□ -1.43
CTNND1-236ENST00000533667 NDUFAF3Q9BU61 184 aa6.12□□□□□ -1.43
CTNND1-236ENST00000533667 HSPB8Q9UJY1 196 aa6.12□□□□□ -1.43
CTNND1-236ENST00000533667 FZR1Q9UM11 496 aa6.12□□□□□ -1.43
CTNND1-236ENST00000533667 FOCADQ5VW36 1801 aa6.12□□□□□ -1.43
CTNND1-236ENST00000533667 DSPPQ9NZW4 1301 aa6.12□□□□□ -1.43
CTNND1-236ENST00000533667 HYAL3O43820 417 aaPredicted RBP6.12□□□□□ -1.43
CTNND1-236ENST00000533667 ARG1P05089 322 aa6.12□□□□□ -1.43
CTNND1-236ENST00000533667 NPY1RP25929 384 aa6.12□□□□□ -1.43
CTNND1-236ENST00000533667 RPL30P62888 115 aaKnown RBP6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms