RNA–Protein interactions for RNA: ENST00000533196.1

SMPD1-209, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 3

Gene SMPD1, Length 425 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-209ENST00000533196 SELENOIQ9C0D9 397 aa18.63■□□□□ 0.57
SMPD1-209ENST00000533196 CST11Q9H112 138 aa18.63■□□□□ 0.57
SMPD1-209ENST00000533196 SCN3BQ9NY72 215 aa18.63■□□□□ 0.57
SMPD1-209ENST00000533196 TRAPPC2LQ9UL33 140 aa18.63■□□□□ 0.57
SMPD1-209ENST00000533196 PEX16Q9Y5Y5 336 aa18.63■□□□□ 0.57
SMPD1-209ENST00000533196 IGHV1-3A0A0C4DH29 117 aa18.62■□□□□ 0.57
SMPD1-209ENST00000533196 A0A1W2PPE3 182 aa18.62■□□□□ 0.57
SMPD1-209ENST00000533196 SPINT2O43291 252 aa18.62■□□□□ 0.57
SMPD1-209ENST00000533196 CRTAPO75718 401 aaPredicted RBP18.62■□□□□ 0.57
SMPD1-209ENST00000533196 IGKV1D-33P01593 117 aa18.62■□□□□ 0.57
SMPD1-209ENST00000533196 IGKV1-33P01594 117 aa18.62■□□□□ 0.57
SMPD1-209ENST00000533196 UBBP0CG47 229 aa18.62■□□□□ 0.57
SMPD1-209ENST00000533196 FUT3P21217 361 aa18.62■□□□□ 0.57
SMPD1-209ENST00000533196 C6orf141Q5SZD1 244 aa18.62■□□□□ 0.57
SMPD1-209ENST00000533196 SYT6Q5T7P8 510 aaPredicted RBP18.62■□□□□ 0.57
SMPD1-209ENST00000533196 UNQ9370/PRO34162Q6UXP9 181 aa18.62■□□□□ 0.57
SMPD1-209ENST00000533196 ZNF554Q86TJ5 538 aa18.62■□□□□ 0.57
SMPD1-209ENST00000533196 IZUMO1Q8IYV9 350 aa18.62■□□□□ 0.57
SMPD1-209ENST00000533196 C5orf56Q8N8D9 126 aa18.62■□□□□ 0.57
SMPD1-209ENST00000533196 WFDC9Q8NEX5 89 aa18.62■□□□□ 0.57
SMPD1-209ENST00000533196 SH2D7A6NKC9 451 aaPredicted RBP18.61■□□□□ 0.57
SMPD1-209ENST00000533196 C12orf77C9JDV5 145 aa18.61■□□□□ 0.57
SMPD1-209ENST00000533196 GPR50Q13585 617 aa18.61■□□□□ 0.57
SMPD1-209ENST00000533196 ACSM3Q53FZ2 586 aa18.61■□□□□ 0.57
SMPD1-209ENST00000533196 TMEM104Q8NE00 496 aa18.61■□□□□ 0.57
SMPD1-209ENST00000533196 PHYHIPQ92561 330 aa18.61■□□□□ 0.57
SMPD1-209ENST00000533196 BANF2Q9H503 90 aa18.61■□□□□ 0.57
SMPD1-209ENST00000533196 TXNL1O43396 289 aa18.6■□□□□ 0.57
SMPD1-209ENST00000533196 PF4V1P10720 104 aa18.6■□□□□ 0.57
SMPD1-209ENST00000533196 GABPB1Q06547 395 aaPredicted RBP18.6■□□□□ 0.57
SMPD1-209ENST00000533196 SPHARQ15513 63 aa18.6■□□□□ 0.57
SMPD1-209ENST00000533196 STEAP3Q658P3 488 aa18.6■□□□□ 0.57
SMPD1-209ENST00000533196 GLT8D1Q68CQ7 371 aa18.6■□□□□ 0.57
SMPD1-209ENST00000533196 MOB3BQ86TA1 216 aa18.6■□□□□ 0.57
SMPD1-209ENST00000533196 CHPT1Q8WUD6 406 aa18.6■□□□□ 0.57
SMPD1-209ENST00000533196 ST6GALNAC6Q969X2 333 aa18.6■□□□□ 0.57
SMPD1-209ENST00000533196 A0A1W2PRX2 142 aa18.59■□□□□ 0.57
SMPD1-209ENST00000533196 PSMB11A5LHX3 300 aa18.59■□□□□ 0.57
SMPD1-209ENST00000533196 H0YHG0 523 aa18.59■□□□□ 0.57
SMPD1-209ENST00000533196 ZNF137PP52743 207 aa18.59■□□□□ 0.57
SMPD1-209ENST00000533196 HNF4GQ14541 408 aa18.59■□□□□ 0.57
SMPD1-209ENST00000533196 SLC25A48Q6ZT89 311 aaKnown RBP18.59■□□□□ 0.57
SMPD1-209ENST00000533196 ZNF439Q8NDP4 499 aa18.59■□□□□ 0.57
SMPD1-209ENST00000533196 OR2T10Q8NGZ9 312 aa18.59■□□□□ 0.57
SMPD1-209ENST00000533196 OR4K15Q8NH41 348 aa18.59■□□□□ 0.57
SMPD1-209ENST00000533196 GNG12Q9UBI6 72 aa18.59■□□□□ 0.57
SMPD1-209ENST00000533196 LSM2Q9Y333 95 aaKnown RBP18.59■□□□□ 0.57
SMPD1-209ENST00000533196 IGHV3-43A0A0B4J1X8 118 aa18.58■□□□□ 0.56
SMPD1-209ENST00000533196 PTGES3LE9PB15 166 aa18.58■□□□□ 0.56
SMPD1-209ENST00000533196 PDCD6O75340 191 aa18.58■□□□□ 0.56
SMPD1-209ENST00000533196 IGHG2P01859 326 aa18.58■□□□□ 0.56
SMPD1-209ENST00000533196 IGHV3-43DP0DP04 118 aa18.58■□□□□ 0.56
SMPD1-209ENST00000533196 CD33P20138 364 aa18.58■□□□□ 0.56
SMPD1-209ENST00000533196 CD1BP29016 333 aa18.58■□□□□ 0.56
SMPD1-209ENST00000533196 OXLD1Q5BKU9 147 aa18.58■□□□□ 0.56
SMPD1-209ENST00000533196 C1orf100Q5SVJ3 147 aa18.58■□□□□ 0.56
SMPD1-209ENST00000533196 SIGIRRQ6IA17 410 aa18.58■□□□□ 0.56
SMPD1-209ENST00000533196 UBALD1Q8TB05 177 aa18.58■□□□□ 0.56
SMPD1-209ENST00000533196 RTN4IP1Q8WWV3 396 aaPredicted RBP18.58■□□□□ 0.56
SMPD1-209ENST00000533196 EAF1Q96JC9 268 aaPredicted RBP18.58■□□□□ 0.56
SMPD1-209ENST00000533196 MBNL3Q9NUK0 354 aaKnown RBP18.58■□□□□ 0.56
SMPD1-209ENST00000533196 KCNIP1Q9NZI2 227 aa18.58■□□□□ 0.56
SMPD1-209ENST00000533196 ANKRD65E5RJM6 399 aa18.57■□□□□ 0.56
SMPD1-209ENST00000533196 HBZP02008 142 aa18.57■□□□□ 0.56
SMPD1-209ENST00000533196 PF4P02776 101 aa18.57■□□□□ 0.56
SMPD1-209ENST00000533196 TGIF2LXQ8IUE1 241 aa18.57■□□□□ 0.56
SMPD1-209ENST00000533196 FOXRED2Q8IWF2 684 aa18.57■□□□□ 0.56
SMPD1-209ENST00000533196 COMMD1Q8N668 190 aa18.57■□□□□ 0.56
SMPD1-209ENST00000533196 Q8N6K4 173 aa18.57■□□□□ 0.56
SMPD1-209ENST00000533196 NECAP2Q9NVZ3 263 aa18.57■□□□□ 0.56
SMPD1-209ENST00000533196 NKX1-2Q9UD57 310 aaPredicted RBP18.57■□□□□ 0.56
SMPD1-209ENST00000533196 TPRKBQ9Y3C4 175 aa18.57■□□□□ 0.56
SMPD1-209ENST00000533196 CD37P11049 281 aa18.56■□□□□ 0.56
SMPD1-209ENST00000533196 REG1BP48304 166 aa18.56■□□□□ 0.56
SMPD1-209ENST00000533196 GP2P55259 537 aaKnown RBP18.56■□□□□ 0.56
SMPD1-209ENST00000533196 SLC35A2P78381 396 aa18.56■□□□□ 0.56
SMPD1-209ENST00000533196 SLC35B1P78383 322 aa18.56■□□□□ 0.56
SMPD1-209ENST00000533196 IRF3Q14653 427 aa18.56■□□□□ 0.56
SMPD1-209ENST00000533196 MED22Q15528 200 aa18.56■□□□□ 0.56
SMPD1-209ENST00000533196 RBM48Q5RL73 367 aaKnown RBP18.56■□□□□ 0.56
SMPD1-209ENST00000533196 C10orf99Q6UWK7 81 aa18.56■□□□□ 0.56
SMPD1-209ENST00000533196 SLC35E3Q7Z769 313 aa18.56■□□□□ 0.56
SMPD1-209ENST00000533196 LRRTM1Q86UE6 522 aa18.56■□□□□ 0.56
SMPD1-209ENST00000533196 OR8H1Q8NGG4 311 aa18.56■□□□□ 0.56
SMPD1-209ENST00000533196 TMED9Q9BVK6 235 aa18.56■□□□□ 0.56
SMPD1-209ENST00000533196 TAF9BQ9HBM6 251 aa18.56■□□□□ 0.56
SMPD1-209ENST00000533196 LIN7CQ9NUP9 197 aaKnown RBP18.56■□□□□ 0.56
SMPD1-209ENST00000533196 LRRC42Q9Y546 428 aa18.56■□□□□ 0.56
SMPD1-209ENST00000533196 UBE2QL1A1L167 161 aa18.55■□□□□ 0.56
SMPD1-209ENST00000533196 SERPINE3A8MV23 424 aa18.55■□□□□ 0.56
SMPD1-209ENST00000533196 MPIG6BO95866 241 aa18.55■□□□□ 0.56
SMPD1-209ENST00000533196 RCC1P18754 421 aaPredicted RBP18.55■□□□□ 0.56
SMPD1-209ENST00000533196 SRMP19623 302 aa18.55■□□□□ 0.56
SMPD1-209ENST00000533196 SLC6A1P30531 599 aa18.55■□□□□ 0.56
SMPD1-209ENST00000533196 AQP4P55087 323 aa18.55■□□□□ 0.56
SMPD1-209ENST00000533196 HSD17B12Q53GQ0 312 aa18.55■□□□□ 0.56
SMPD1-209ENST00000533196 CT45A1Q5HYN5 189 aa18.55■□□□□ 0.56
SMPD1-209ENST00000533196 KHDC1LQ5JSQ8 128 aa18.55■□□□□ 0.56
SMPD1-209ENST00000533196 OR1L1Q8NH94 360 aa18.55■□□□□ 0.56
SMPD1-209ENST00000533196 CT45A3Q8NHU0 189 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms