RNA–Protein interactions for RNA: ENST00000533078.5

CMTM1-216, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-216ENST00000533078 GALEQ14376 348 aa8.98□□□□□ -0.97
CMTM1-216ENST00000533078 ATP6AP1Q15904 470 aa8.98□□□□□ -0.97
CMTM1-216ENST00000533078 SRSF7Q16629 238 aaKnown RBP eCLIP8.98□□□□□ -0.97
CMTM1-216ENST00000533078 SGPP2Q8IWX5 399 aa8.98□□□□□ -0.97
CMTM1-216ENST00000533078 ACBD7Q8N6N7 88 aa8.98□□□□□ -0.97
CMTM1-216ENST00000533078 TMEM104Q8NE00 496 aa8.98□□□□□ -0.97
CMTM1-216ENST00000533078 MYOZ3Q8TDC0 251 aa8.98□□□□□ -0.97
CMTM1-216ENST00000533078 TRUB1Q8WWH5 349 aaKnown RBP8.98□□□□□ -0.97
CMTM1-216ENST00000533078 ST6GALNAC6Q969X2 333 aa8.98□□□□□ -0.97
CMTM1-216ENST00000533078 C4orf36Q96KX1 117 aa8.98□□□□□ -0.97
CMTM1-216ENST00000533078 CIB1Q99828 191 aa8.98□□□□□ -0.97
CMTM1-216ENST00000533078 ZNF251Q9BRH9 671 aa8.98□□□□□ -0.97
CMTM1-216ENST00000533078 GABARAPL1Q9H0R8 117 aa8.98□□□□□ -0.97
CMTM1-216ENST00000533078 METTL9Q9H1A3 318 aa8.98□□□□□ -0.97
CMTM1-216ENST00000533078 GAR1Q9NY12 217 aaKnown RBP8.98□□□□□ -0.97
CMTM1-216ENST00000533078 KIAA1456Q9P272 454 aa8.98□□□□□ -0.97
CMTM1-216ENST00000533078 POMPQ9Y244 141 aa8.98□□□□□ -0.97
CMTM1-216ENST00000533078 WSB1Q9Y6I7 421 aa8.98□□□□□ -0.97
CMTM1-216ENST00000533078 PLECQ15149 4684 aaKnown RBP8.98□□□□□ -0.97
CMTM1-216ENST00000533078 IGHV3-43A0A0B4J1X8 118 aa8.97□□□□□ -0.97
CMTM1-216ENST00000533078 TRAV41A0A0B4J266 112 aa8.97□□□□□ -0.97
CMTM1-216ENST00000533078 OR4C45A6NMZ5 311 aa8.97□□□□□ -0.97
CMTM1-216ENST00000533078 AIPO00170 330 aa8.97□□□□□ -0.97
CMTM1-216ENST00000533078 CD2P06729 351 aa8.97□□□□□ -0.97
CMTM1-216ENST00000533078 T-ENOLP0DO92 83 aa8.97□□□□□ -0.97
CMTM1-216ENST00000533078 IGHV3-43DP0DP04 118 aa8.97□□□□□ -0.97
CMTM1-216ENST00000533078 FCGR1AP12314 374 aa8.97□□□□□ -0.97
CMTM1-216ENST00000533078 CD40LGP29965 261 aa8.97□□□□□ -0.97
CMTM1-216ENST00000533078 RAB9AP51151 201 aa8.97□□□□□ -0.97
CMTM1-216ENST00000533078 F2RL1P55085 397 aa8.97□□□□□ -0.97
CMTM1-216ENST00000533078 GNB1P62873 340 aa8.97□□□□□ -0.97
CMTM1-216ENST00000533078 ATAD3CQ5T2N8 411 aa8.97□□□□□ -0.97
CMTM1-216ENST00000533078 C6orf183Q5T699 404 aa8.97□□□□□ -0.97
CMTM1-216ENST00000533078 MEDAGQ5VYS4 303 aa8.97□□□□□ -0.97
CMTM1-216ENST00000533078 SLC25A48Q6ZT89 311 aaKnown RBP8.97□□□□□ -0.97
CMTM1-216ENST00000533078 LYPD6Q86Y78 171 aa8.97□□□□□ -0.97
CMTM1-216ENST00000533078 PARP16Q8N5Y8 322 aa8.97□□□□□ -0.97
CMTM1-216ENST00000533078 OR10K1Q8NGX5 313 aa8.97□□□□□ -0.97
CMTM1-216ENST00000533078 OR5AK2Q8NH90 309 aa8.97□□□□□ -0.97
CMTM1-216ENST00000533078 CCDC107Q8WV48 283 aa8.97□□□□□ -0.97
CMTM1-216ENST00000533078 TM2D3Q9BRN9 247 aa8.97□□□□□ -0.97
CMTM1-216ENST00000533078 ELOVL1Q9BW60 279 aa8.97□□□□□ -0.97
CMTM1-216ENST00000533078 CST11Q9H112 138 aa8.97□□□□□ -0.97
CMTM1-216ENST00000533078 KLK15Q9H2R5 256 aa8.97□□□□□ -0.97
CMTM1-216ENST00000533078 IFT22Q9H7X7 185 aa8.97□□□□□ -0.97
CMTM1-216ENST00000533078 SPACA1Q9HBV2 294 aa8.97□□□□□ -0.97
CMTM1-216ENST00000533078 NKX1-2Q9UD57 310 aaPredicted RBP8.97□□□□□ -0.97
CMTM1-216ENST00000533078 ING4Q9UNL4 249 aa8.97□□□□□ -0.97
CMTM1-216ENST00000533078 ORC6Q9Y5N6 252 aa8.97□□□□□ -0.97
CMTM1-216ENST00000533078 ZNF736B4DX44 427 aaPredicted RBP8.96□□□□□ -0.98
CMTM1-216ENST00000533078 GABRPO00591 440 aa8.96□□□□□ -0.98
CMTM1-216ENST00000533078 ARPC1BO15143 372 aaKnown RBP8.96□□□□□ -0.98
CMTM1-216ENST00000533078 ZNF780AO75290 641 aaPredicted RBP8.96□□□□□ -0.98
CMTM1-216ENST00000533078 HLA-DRB1P01911 266 aa8.96□□□□□ -0.98
CMTM1-216ENST00000533078 PPIFP30405 207 aaKnown RBP8.96□□□□□ -0.98
CMTM1-216ENST00000533078 ZNF137PP52743 207 aa8.96□□□□□ -0.98
CMTM1-216ENST00000533078 PPP3R1P63098 170 aa8.96□□□□□ -0.98
CMTM1-216ENST00000533078 MPV17LQ2QL34 196 aa8.96□□□□□ -0.98
CMTM1-216ENST00000533078 NHLRC3Q5JS37 347 aa8.96□□□□□ -0.98
CMTM1-216ENST00000533078 TRAT1Q6PIZ9 186 aa8.96□□□□□ -0.98
CMTM1-216ENST00000533078 ANKRD13BQ86YJ7 626 aa8.96□□□□□ -0.98
CMTM1-216ENST00000533078 PRR18Q8N4B5 295 aa8.96□□□□□ -0.98
CMTM1-216ENST00000533078 OR52N1Q8NH53 320 aa8.96□□□□□ -0.98
CMTM1-216ENST00000533078 UBALD1Q8TB05 177 aa8.96□□□□□ -0.98
CMTM1-216ENST00000533078 FLYWCH2Q96CP2 140 aaKnown RBP8.96□□□□□ -0.98
CMTM1-216ENST00000533078 PELI1Q96FA3 418 aa8.96□□□□□ -0.98
CMTM1-216ENST00000533078 SPATA25Q9BR10 227 aa8.96□□□□□ -0.98
CMTM1-216ENST00000533078 JAM3Q9BX67 310 aa8.96□□□□□ -0.98
CMTM1-216ENST00000533078 GABARAPL3Q9BY60 117 aa8.96□□□□□ -0.98
CMTM1-216ENST00000533078 TRAPPC2LQ9UL33 140 aa8.96□□□□□ -0.98
CMTM1-216ENST00000533078 TRIM64CA6NLI5 447 aa8.95□□□□□ -0.98
CMTM1-216ENST00000533078 G3V318 75 aa8.95□□□□□ -0.98
CMTM1-216ENST00000533078 C15orf65H3BRN8 121 aa8.95□□□□□ -0.98
CMTM1-216ENST00000533078 ATP6V0E1O15342 81 aa8.95□□□□□ -0.98
CMTM1-216ENST00000533078 LANCL1O43813 399 aa8.95□□□□□ -0.98
CMTM1-216ENST00000533078 IGLV1-40P01703 118 aa8.95□□□□□ -0.98
CMTM1-216ENST00000533078 SERPINA2P20848 420 aa8.95□□□□□ -0.98
CMTM1-216ENST00000533078 VEGFCP49767 419 aa8.95□□□□□ -0.98
CMTM1-216ENST00000533078 GBX2P52951 348 aaPredicted RBP8.95□□□□□ -0.98
CMTM1-216ENST00000533078 GYS2P54840 703 aa8.95□□□□□ -0.98
CMTM1-216ENST00000533078 SLURP1P55000 103 aa8.95□□□□□ -0.98
CMTM1-216ENST00000533078 RBM11P57052 281 aaKnown RBP8.95□□□□□ -0.98
CMTM1-216ENST00000533078 ACTBP60709 375 aa8.95□□□□□ -0.98
CMTM1-216ENST00000533078 TMEM267Q0VDI3 215 aaPredicted RBP8.95□□□□□ -0.98
CMTM1-216ENST00000533078 LSAMPQ13449 338 aa8.95□□□□□ -0.98
CMTM1-216ENST00000533078 ECSCRQ19T08 205 aa8.95□□□□□ -0.98
CMTM1-216ENST00000533078 ASPHD1Q5U4P2 390 aa8.95□□□□□ -0.98
CMTM1-216ENST00000533078 STEAP3Q658P3 488 aa8.95□□□□□ -0.98
CMTM1-216ENST00000533078 PYHIN1Q6K0P9 492 aa8.95□□□□□ -0.98
CMTM1-216ENST00000533078 ACSM6Q6P461 480 aa8.95□□□□□ -0.98
CMTM1-216ENST00000533078 ADAMTSL5Q6ZMM2 481 aa8.95□□□□□ -0.98
CMTM1-216ENST00000533078 TCTEX1D1Q8N7M0 179 aa8.95□□□□□ -0.98
CMTM1-216ENST00000533078 OR10V1Q8NGI7 309 aa8.95□□□□□ -0.98
CMTM1-216ENST00000533078 OR51A2Q8NGJ7 313 aa8.95□□□□□ -0.98
CMTM1-216ENST00000533078 IL17DQ8TAD2 202 aa8.95□□□□□ -0.98
CMTM1-216ENST00000533078 ABHD5Q8WTS1 349 aa8.95□□□□□ -0.98
CMTM1-216ENST00000533078 ARPC1AQ92747 370 aa8.95□□□□□ -0.98
CMTM1-216ENST00000533078 DLX4Q92988 240 aaPredicted RBP8.95□□□□□ -0.98
CMTM1-216ENST00000533078 RNF166Q96A37 237 aaPredicted RBP8.95□□□□□ -0.98
CMTM1-216ENST00000533078 ALG8Q9BVK2 526 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms