RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 ZNF729A6NN14 1252 aaPredicted RBP13.46□□□□□ -0.25
PKP3-209ENST00000533069 FAM90A22PA8MWA6 464 aa13.46□□□□□ -0.25
PKP3-209ENST00000533069 FAM90A12PA8MX19 464 aa13.46□□□□□ -0.25
PKP3-209ENST00000533069 FAM90A5PA8MXJ8 464 aa13.46□□□□□ -0.25
PKP3-209ENST00000533069 FAM90A23PA8MXZ1 464 aa13.46□□□□□ -0.25
PKP3-209ENST00000533069 LDLRAD4O15165 306 aa13.46□□□□□ -0.25
PKP3-209ENST00000533069 FAM90A15PP0C7V4 464 aa13.46□□□□□ -0.25
PKP3-209ENST00000533069 FAM90A13PP0C7W8 464 aa13.46□□□□□ -0.25
PKP3-209ENST00000533069 FAM90A14PP0C7W9 464 aa13.46□□□□□ -0.25
PKP3-209ENST00000533069 FAM90A24PP0C7X0 464 aa13.46□□□□□ -0.25
PKP3-209ENST00000533069 VSIG8P0DPA2 414 aa13.46□□□□□ -0.25
PKP3-209ENST00000533069 CDK2P24941 298 aa13.46□□□□□ -0.25
PKP3-209ENST00000533069 PAX6P26367 422 aa13.46□□□□□ -0.25
PKP3-209ENST00000533069 ETV6P41212 452 aa13.46□□□□□ -0.25
PKP3-209ENST00000533069 QRFPP83859 136 aa13.46□□□□□ -0.25
PKP3-209ENST00000533069 P2RY14Q15391 338 aa13.46□□□□□ -0.25
PKP3-209ENST00000533069 SSX2Q16385 188 aa13.46□□□□□ -0.25
PKP3-209ENST00000533069 PIGYQ3MUY2 71 aa13.46□□□□□ -0.25
PKP3-209ENST00000533069 SPANXN2Q5MJ10 180 aa13.46□□□□□ -0.25
PKP3-209ENST00000533069 PRAMEF5Q5TYX0 476 aa13.46□□□□□ -0.25
PKP3-209ENST00000533069 C11orf88Q6PI97 169 aa13.46□□□□□ -0.25
PKP3-209ENST00000533069 DYNAPQ8N1N2 210 aa13.46□□□□□ -0.25
PKP3-209ENST00000533069 OSR2Q8N2R0 312 aa13.46□□□□□ -0.25
PKP3-209ENST00000533069 ZNF596Q8TC21 504 aa13.46□□□□□ -0.25
PKP3-209ENST00000533069 PIFOQ8TCI5 191 aa13.46□□□□□ -0.25
PKP3-209ENST00000533069 TSC22D3Q99576 134 aa13.46□□□□□ -0.25
PKP3-209ENST00000533069 TMEM59Q9BXS4 323 aa13.46□□□□□ -0.25
PKP3-209ENST00000533069 NPFFR1Q9GZQ6 430 aa13.46□□□□□ -0.25
PKP3-209ENST00000533069 DIABLOQ9NR28 239 aa13.46□□□□□ -0.25
PKP3-209ENST00000533069 RHBDL2Q9NX52 303 aa13.46□□□□□ -0.25
PKP3-209ENST00000533069 PITPNC1Q9UKF7 332 aa13.46□□□□□ -0.25
PKP3-209ENST00000533069 TCF19Q9Y242 345 aa13.46□□□□□ -0.25
PKP3-209ENST00000533069 ST3GAL6Q9Y274 331 aa13.46□□□□□ -0.25
PKP3-209ENST00000533069 HSPB6O14558 160 aa13.45□□□□□ -0.26
PKP3-209ENST00000533069 MMP23AO75900 390 aa13.45□□□□□ -0.26
PKP3-209ENST00000533069 HTR1DP28221 377 aa13.45□□□□□ -0.26
PKP3-209ENST00000533069 CLDN12P56749 244 aa13.45□□□□□ -0.26
PKP3-209ENST00000533069 RBM11P57052 281 aaKnown RBP13.45□□□□□ -0.26
PKP3-209ENST00000533069 ZNF45Q02386 682 aa13.45□□□□□ -0.26
PKP3-209ENST00000533069 LSAMPQ13449 338 aa13.45□□□□□ -0.26
PKP3-209ENST00000533069 SLC22A6Q4U2R8 563 aa13.45□□□□□ -0.26
PKP3-209ENST00000533069 LDLRAD2Q5SZI1 272 aa13.45□□□□□ -0.26
PKP3-209ENST00000533069 SLC35E4Q6ICL7 350 aa13.45□□□□□ -0.26
PKP3-209ENST00000533069 ABHD12Q8N2K0 398 aa13.45□□□□□ -0.26
PKP3-209ENST00000533069 ZNF565Q8N9K5 539 aa13.45□□□□□ -0.26
PKP3-209ENST00000533069 OR4P4Q8NGL7 312 aa13.45□□□□□ -0.26
PKP3-209ENST00000533069 MEIKINA0A087WXM9 373 aa13.44□□□□□ -0.26
PKP3-209ENST00000533069 TMEM272A0A1B0GTI8 110 aa13.44□□□□□ -0.26
PKP3-209ENST00000533069 KBTBD11-OT1A0A1B0GTJ5 212 aa13.44□□□□□ -0.26
PKP3-209ENST00000533069 FAM25AB3EWG3 89 aa13.44□□□□□ -0.26
PKP3-209ENST00000533069 FAM25CB3EWG5 89 aa13.44□□□□□ -0.26
PKP3-209ENST00000533069 FAM25GB3EWG6 89 aa13.44□□□□□ -0.26
PKP3-209ENST00000533069 CTDSP2O14595 271 aa13.44□□□□□ -0.26
PKP3-209ENST00000533069 TIMM23O14925 209 aa13.44□□□□□ -0.26
PKP3-209ENST00000533069 CRTAPO75718 401 aaPredicted RBP13.44□□□□□ -0.26
PKP3-209ENST00000533069 MGMTP16455 207 aa13.44□□□□□ -0.26
PKP3-209ENST00000533069 CD34P28906 385 aa13.44□□□□□ -0.26
PKP3-209ENST00000533069 KIR2DS4P43632 304 aa13.44□□□□□ -0.26
PKP3-209ENST00000533069 RPS27AP62979 156 aaKnown RBP13.44□□□□□ -0.26
PKP3-209ENST00000533069 MPV17LQ2QL34 196 aa13.44□□□□□ -0.26
PKP3-209ENST00000533069 PLA1AQ53H76 456 aa13.44□□□□□ -0.26
PKP3-209ENST00000533069 OR56B1Q8NGI3 324 aa13.44□□□□□ -0.26
PKP3-209ENST00000533069 FAM46BQ96A09 425 aa13.44□□□□□ -0.26
PKP3-209ENST00000533069 CREB3L1Q96BA8 519 aa13.44□□□□□ -0.26
PKP3-209ENST00000533069 NKX3-1Q99801 234 aaPredicted RBP13.44□□□□□ -0.26
PKP3-209ENST00000533069 DPCDQ9BVM2 203 aaPredicted RBP13.44□□□□□ -0.26
PKP3-209ENST00000533069 TM2D1Q9BX74 207 aa13.44□□□□□ -0.26
PKP3-209ENST00000533069 WDR12Q9GZL7 423 aaKnown RBP13.44□□□□□ -0.26
PKP3-209ENST00000533069 ING3Q9NXR8 418 aa13.44□□□□□ -0.26
PKP3-209ENST00000533069 KIF25Q9UIL4 384 aa13.44□□□□□ -0.26
PKP3-209ENST00000533069 MGAM2Q2M2H8 2515 aa13.43□□□□□ -0.26
PKP3-209ENST00000533069 A0A087X0M5 115 aa13.43□□□□□ -0.26
PKP3-209ENST00000533069 A0A1B0GX30 115 aa13.43□□□□□ -0.26
PKP3-209ENST00000533069 M0QZ24 198 aa13.43□□□□□ -0.26
PKP3-209ENST00000533069 F2RL2O00254 374 aa13.43□□□□□ -0.26
PKP3-209ENST00000533069 CHST1O43916 411 aa13.43□□□□□ -0.26
PKP3-209ENST00000533069 HPGDSO60760 199 aa13.43□□□□□ -0.26
PKP3-209ENST00000533069 OR7C1O76099 320 aaPredicted RBP13.43□□□□□ -0.26
PKP3-209ENST00000533069 SERPINA2P20848 420 aa13.43□□□□□ -0.26
PKP3-209ENST00000533069 MNDAP41218 407 aa13.43□□□□□ -0.26
PKP3-209ENST00000533069 GLP1RP43220 463 aa13.43□□□□□ -0.26
PKP3-209ENST00000533069 ARHGDIBP52566 201 aa13.43□□□□□ -0.26
PKP3-209ENST00000533069 PITPNAQ00169 270 aa13.43□□□□□ -0.26
PKP3-209ENST00000533069 SRSF4Q08170 494 aaKnown RBP13.43□□□□□ -0.26
PKP3-209ENST00000533069 C17orf58Q2M2W7 97 aa13.43□□□□□ -0.26
PKP3-209ENST00000533069 RSBN1Q5VWQ0 802 aaPredicted RBP13.43□□□□□ -0.26
PKP3-209ENST00000533069 CCDC190Q86UF4 302 aa13.43□□□□□ -0.26
PKP3-209ENST00000533069 LAX1Q8IWV1 398 aa13.43□□□□□ -0.26
PKP3-209ENST00000533069 OR2T6Q8NHC8 308 aa13.43□□□□□ -0.26
PKP3-209ENST00000533069 DIRAS2Q96HU8 199 aa13.43□□□□□ -0.26
PKP3-209ENST00000533069 LINC00574Q9H8X3 128 aa13.43□□□□□ -0.26
PKP3-209ENST00000533069 SPACA1Q9HBV2 294 aa13.43□□□□□ -0.26
PKP3-209ENST00000533069 DPM3Q9P2X0 92 aa13.43□□□□□ -0.26
PKP3-209ENST00000533069 HILPDAQ9Y5L2 63 aa13.43□□□□□ -0.26
PKP3-209ENST00000533069 A6NDX4 124 aa13.42□□□□□ -0.26
PKP3-209ENST00000533069 LEUTXA8MZ59 168 aa13.42□□□□□ -0.26
PKP3-209ENST00000533069 TOR1AO14656 332 aa13.42□□□□□ -0.26
PKP3-209ENST00000533069 GEMIN2O14893 280 aaKnown RBP13.42□□□□□ -0.26
PKP3-209ENST00000533069 XRCC3O43542 346 aa13.42□□□□□ -0.26
PKP3-209ENST00000533069 MPIG6BO95866 241 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms