RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 SLC25A53Q5H9E4 307 aa13.25□□□□□ -0.29
PCDHA3-202ENST00000532566 STPG1Q5TH74 334 aa13.25□□□□□ -0.29
PCDHA3-202ENST00000532566 DBX2Q6ZNG2 339 aa13.25□□□□□ -0.29
PCDHA3-202ENST00000532566 IL36GQ9NZH8 169 aa13.25□□□□□ -0.29
PCDHA3-202ENST00000532566 MDC1Q14676 2089 aaKnown RBP13.24□□□□□ -0.29
PCDHA3-202ENST00000532566 TRAV38-1A0A0B4J264 116 aa13.24□□□□□ -0.29
PCDHA3-202ENST00000532566 ZNF320A2RRD8 509 aa13.24□□□□□ -0.29
PCDHA3-202ENST00000532566 NQO2P16083 231 aa13.24□□□□□ -0.29
PCDHA3-202ENST00000532566 HLA-GP17693 338 aa13.24□□□□□ -0.29
PCDHA3-202ENST00000532566 FGF8P55075 233 aaPredicted RBP13.24□□□□□ -0.29
PCDHA3-202ENST00000532566 AESQ08117 197 aa13.24□□□□□ -0.29
PCDHA3-202ENST00000532566 FAM131CQ96AQ9 280 aa13.24□□□□□ -0.29
PCDHA3-202ENST00000532566 MOB3AQ96BX8 217 aa13.24□□□□□ -0.29
PCDHA3-202ENST00000532566 ZNF251Q9BRH9 671 aa13.24□□□□□ -0.29
PCDHA3-202ENST00000532566 PPP1R14DQ9NXH3 145 aa13.24□□□□□ -0.29
PCDHA3-202ENST00000532566 FKBP11Q9NYL4 201 aa13.24□□□□□ -0.29
PCDHA3-202ENST00000532566 V9GYS6 101 aa13.24□□□□□ -0.29
PCDHA3-202ENST00000532566 G3V3Q6 166 aa13.24□□□□□ -0.29
PCDHA3-202ENST00000532566 SCTP09683 121 aa13.24□□□□□ -0.29
PCDHA3-202ENST00000532566 RFPL3SP0C7P2 107 aa13.24□□□□□ -0.29
PCDHA3-202ENST00000532566 ATP6V0CP27449 155 aa13.24□□□□□ -0.29
PCDHA3-202ENST00000532566 UBAC2Q8NBM4 344 aa13.24□□□□□ -0.29
PCDHA3-202ENST00000532566 ZNF439Q8NDP4 499 aa13.24□□□□□ -0.29
PCDHA3-202ENST00000532566 HSD17B10Q99714 261 aaKnown RBP13.24□□□□□ -0.29
PCDHA3-202ENST00000532566 TPPP3Q9BW30 176 aa13.24□□□□□ -0.29
PCDHA3-202ENST00000532566 RCC2Q9P258 522 aaKnown RBP13.24□□□□□ -0.29
PCDHA3-202ENST00000532566 RNF7Q9UBF6 113 aa13.24□□□□□ -0.29
PCDHA3-202ENST00000532566 PRR32B1ATL7 298 aa13.24□□□□□ -0.29
PCDHA3-202ENST00000532566 CBLN2Q8IUK8 224 aa13.24□□□□□ -0.29
PCDHA3-202ENST00000532566 CRYM-AS1A6NIL9 109 aa13.23□□□□□ -0.29
PCDHA3-202ENST00000532566 SYNGR1O43759 233 aa13.23□□□□□ -0.29
PCDHA3-202ENST00000532566 KCNMB1Q16558 191 aa13.23□□□□□ -0.29
PCDHA3-202ENST00000532566 FADS6Q8N9I5 356 aa13.23□□□□□ -0.29
PCDHA3-202ENST00000532566 DEDDO75618 318 aa13.23□□□□□ -0.29
PCDHA3-202ENST00000532566 ACP1P24666 158 aa13.23□□□□□ -0.29
PCDHA3-202ENST00000532566 NHLH2Q02577 135 aa13.23□□□□□ -0.29
PCDHA3-202ENST00000532566 P2RY6Q15077 328 aa13.23□□□□□ -0.29
PCDHA3-202ENST00000532566 ZNF441Q8N8Z8 693 aa13.23□□□□□ -0.29
PCDHA3-202ENST00000532566 TMEM222Q9H0R3 208 aa13.23□□□□□ -0.29
PCDHA3-202ENST00000532566 SLC35D1Q9NTN3 355 aa13.23□□□□□ -0.29
PCDHA3-202ENST00000532566 C20orf202A1L168 122 aa13.23□□□□□ -0.29
PCDHA3-202ENST00000532566 TMPRSS2O15393 492 aa13.23□□□□□ -0.29
PCDHA3-202ENST00000532566 ZIC3O60481 467 aa13.23□□□□□ -0.29
PCDHA3-202ENST00000532566 ZP1P60852 638 aa13.23□□□□□ -0.29
PCDHA3-202ENST00000532566 CFHR1Q03591 330 aa13.23□□□□□ -0.29
PCDHA3-202ENST00000532566 C1orf174Q8IYL3 243 aa13.23□□□□□ -0.29
PCDHA3-202ENST00000532566 OR10C1Q96KK4 312 aa13.23□□□□□ -0.29
PCDHA3-202ENST00000532566 MELTFP08582 738 aa13.23□□□□□ -0.29
PCDHA3-202ENST00000532566 CT45A10P0DMU9 189 aa13.23□□□□□ -0.29
PCDHA3-202ENST00000532566 OR1K1Q8NGR3 316 aa13.23□□□□□ -0.29
PCDHA3-202ENST00000532566 GAR1Q9NY12 217 aaKnown RBP13.23□□□□□ -0.29
PCDHA3-202ENST00000532566 LNP1A1A4G5 178 aa13.22□□□□□ -0.29
PCDHA3-202ENST00000532566 PRR19A6NJB7 356 aa13.22□□□□□ -0.29
PCDHA3-202ENST00000532566 K7ESF4 209 aa13.22□□□□□ -0.29
PCDHA3-202ENST00000532566 GDF9O60383 454 aa13.22□□□□□ -0.29
PCDHA3-202ENST00000532566 ZNF883P0CG24 379 aa13.22□□□□□ -0.29
PCDHA3-202ENST00000532566 MST1P26927 711 aa13.22□□□□□ -0.29
PCDHA3-202ENST00000532566 CSN1S1P47710 185 aa13.22□□□□□ -0.29
PCDHA3-202ENST00000532566 SULT1A2P50226 295 aa13.22□□□□□ -0.29
PCDHA3-202ENST00000532566 FABP9Q0Z7S8 132 aa13.22□□□□□ -0.29
PCDHA3-202ENST00000532566 C17orf82Q86X59 251 aaPredicted RBP13.22□□□□□ -0.29
PCDHA3-202ENST00000532566 MRPL13Q9BYD1 178 aaKnown RBP13.22□□□□□ -0.29
PCDHA3-202ENST00000532566 PKIBQ9C010 78 aa13.22□□□□□ -0.29
PCDHA3-202ENST00000532566 HIF1ANQ9NWT6 349 aa13.22□□□□□ -0.29
PCDHA3-202ENST00000532566 PRR33A8MZF0 331 aa13.22□□□□□ -0.29
PCDHA3-202ENST00000532566 RHOBP62745 196 aa13.22□□□□□ -0.29
PCDHA3-202ENST00000532566 PNRC1Q12796 327 aaPredicted RBP13.22□□□□□ -0.29
PCDHA3-202ENST00000532566 SMIM15Q7Z3B0 74 aa13.22□□□□□ -0.29
PCDHA3-202ENST00000532566 FAM90A27PA6NNH2 459 aa13.22□□□□□ -0.29
PCDHA3-202ENST00000532566 RPS2P15880 293 aaKnown RBP13.22□□□□□ -0.29
PCDHA3-202ENST00000532566 SAXO1Q8IYX7 474 aa13.22□□□□□ -0.29
PCDHA3-202ENST00000532566 SHISA5Q8N114 240 aa13.22□□□□□ -0.29
PCDHA3-202ENST00000532566 TMEM252Q8N6L7 170 aa13.22□□□□□ -0.29
PCDHA3-202ENST00000532566 OR5B3Q8NH48 314 aa13.22□□□□□ -0.29
PCDHA3-202ENST00000532566 AQP10Q96PS8 301 aa13.22□□□□□ -0.29
PCDHA3-202ENST00000532566 A0A1B0GTI1 187 aa13.22□□□□□ -0.29
PCDHA3-202ENST00000532566 C7orf77A4D0Y5 90 aa13.22□□□□□ -0.29
PCDHA3-202ENST00000532566 H0Y980 276 aa13.22□□□□□ -0.29
PCDHA3-202ENST00000532566 CNN1P51911 297 aaKnown RBP13.22□□□□□ -0.29
PCDHA3-202ENST00000532566 IGFBP3P17936 291 aaPredicted RBP13.21□□□□□ -0.29
PCDHA3-202ENST00000532566 G6PCP35575 357 aa13.21□□□□□ -0.29
PCDHA3-202ENST00000532566 PPP1CCP36873 323 aaKnown RBP13.21□□□□□ -0.29
PCDHA3-202ENST00000532566 CTDSP1Q9GZU7 261 aa13.21□□□□□ -0.29
PCDHA3-202ENST00000532566 SLC45A2Q9UMX9 530 aa13.21□□□□□ -0.29
PCDHA3-202ENST00000532566 AHRRA9YTQ3 701 aa13.21□□□□□ -0.29
PCDHA3-202ENST00000532566 OPRK1P41145 380 aa13.21□□□□□ -0.29
PCDHA3-202ENST00000532566 NHLRC3Q5JS37 347 aa13.21□□□□□ -0.29
PCDHA3-202ENST00000532566 C1QL2Q7Z5L3 287 aa13.21□□□□□ -0.29
PCDHA3-202ENST00000532566 RPEQ96AT9 228 aa13.21□□□□□ -0.29
PCDHA3-202ENST00000532566 TMEM18Q96B42 140 aa13.21□□□□□ -0.29
PCDHA3-202ENST00000532566 LINC00470Q9BZP3 86 aa13.21□□□□□ -0.29
PCDHA3-202ENST00000532566 ZDHHC11Q9H8X9 412 aa13.21□□□□□ -0.29
PCDHA3-202ENST00000532566 SAP30LQ9HAJ7 183 aa13.21□□□□□ -0.29
PCDHA3-202ENST00000532566 A0A087WV48 116 aa13.21□□□□□ -0.3
PCDHA3-202ENST00000532566 OR2H2O95918 312 aa13.21□□□□□ -0.3
PCDHA3-202ENST00000532566 OPN1MWP04001 364 aa13.21□□□□□ -0.3
PCDHA3-202ENST00000532566 OPN1MW2P0DN77 364 aa13.21□□□□□ -0.3
PCDHA3-202ENST00000532566 OPN1MW3P0DN78 364 aa13.21□□□□□ -0.3
PCDHA3-202ENST00000532566 HOXB1P14653 301 aaPredicted RBP13.21□□□□□ -0.3
PCDHA3-202ENST00000532566 BTCP35070 178 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms