RNA–Protein interactions for RNA: ENST00000532259.1

SRPRA-206, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2 BASIC

Gene SRPRA, Length 2,453 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-206ENST00000532259 SMCO1Q147U7 214 aa12.78□□□□□ -0.36
SRPRA-206ENST00000532259 CMTM1Q8IZ96 169 aa12.78□□□□□ -0.36
SRPRA-206ENST00000532259 H1FOOQ8IZA3 346 aaPredicted RBP12.78□□□□□ -0.36
SRPRA-206ENST00000532259 FAM169BQ8N8A8 192 aa12.78□□□□□ -0.36
SRPRA-206ENST00000532259 RFESDQ8TAC1 157 aa12.78□□□□□ -0.36
SRPRA-206ENST00000532259 BSCL2Q96G97 398 aaPredicted RBP12.78□□□□□ -0.36
SRPRA-206ENST00000532259 MAGT1Q9H0U3 335 aa12.78□□□□□ -0.36
SRPRA-206ENST00000532259 CYTL1Q9NRR1 136 aa12.78□□□□□ -0.36
SRPRA-206ENST00000532259 SDHAF2Q9NX18 166 aa12.78□□□□□ -0.36
SRPRA-206ENST00000532259 ITPR1Q14643 2758 aa12.77□□□□□ -0.36
SRPRA-206ENST00000532259 TRBV6-6A0A0A6YYG2 114 aa12.77□□□□□ -0.37
SRPRA-206ENST00000532259 K7EPK0 472 aa12.77□□□□□ -0.37
SRPRA-206ENST00000532259 DEDDO75618 318 aa12.77□□□□□ -0.37
SRPRA-206ENST00000532259 HKR1P10072 659 aa12.77□□□□□ -0.37
SRPRA-206ENST00000532259 ASCL1P50553 236 aa12.77□□□□□ -0.37
SRPRA-206ENST00000532259 TESK1Q15569 626 aa12.77□□□□□ -0.37
SRPRA-206ENST00000532259 EIF2S3LQ2VIR3 472 aaKnown RBP12.77□□□□□ -0.37
SRPRA-206ENST00000532259 FAM71E2Q8N5Q1 922 aa12.77□□□□□ -0.37
SRPRA-206ENST00000532259 SPERTQ8NA61 448 aa12.77□□□□□ -0.37
SRPRA-206ENST00000532259 LILRB1Q8NHL6 650 aaPredicted RBP12.77□□□□□ -0.37
SRPRA-206ENST00000532259 MRPL37Q9BZE1 423 aaKnown RBP12.77□□□□□ -0.37
SRPRA-206ENST00000532259 TUBD1Q9UJT1 453 aa12.77□□□□□ -0.37
SRPRA-206ENST00000532259 AUP1Q9Y679 476 aa12.77□□□□□ -0.37
SRPRA-206ENST00000532259 IGHV3-43A0A0B4J1X8 118 aa12.77□□□□□ -0.37
SRPRA-206ENST00000532259 H7C1Q1 480 aa12.77□□□□□ -0.37
SRPRA-206ENST00000532259 SCO1O75880 301 aa12.77□□□□□ -0.37
SRPRA-206ENST00000532259 IGHV3-43DP0DP04 118 aa12.77□□□□□ -0.37
SRPRA-206ENST00000532259 EPHA1P21709 976 aa12.77□□□□□ -0.37
SRPRA-206ENST00000532259 RPL12P30050 165 aaKnown RBP12.77□□□□□ -0.37
SRPRA-206ENST00000532259 MDH2P40926 338 aaKnown RBP12.77□□□□□ -0.37
SRPRA-206ENST00000532259 RPL7L1Q6DKI1 246 aaKnown RBP12.77□□□□□ -0.37
SRPRA-206ENST00000532259 CD177Q8N6Q3 437 aa12.77□□□□□ -0.37
SRPRA-206ENST00000532259 OR10V1Q8NGI7 309 aa12.77□□□□□ -0.37
SRPRA-206ENST00000532259 COQ2Q96H96 371 aa12.77□□□□□ -0.37
SRPRA-206ENST00000532259 TLNRD1Q9H1K6 362 aa12.77□□□□□ -0.37
SRPRA-206ENST00000532259 C1QTNF9BB2RNN3 333 aa12.76□□□□□ -0.37
SRPRA-206ENST00000532259 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.76□□□□□ -0.37
SRPRA-206ENST00000532259 ADAM20O43506 726 aa12.76□□□□□ -0.37
SRPRA-206ENST00000532259 GLAP06280 429 aa12.76□□□□□ -0.37
SRPRA-206ENST00000532259 SSTR5P35346 364 aa12.76□□□□□ -0.37
SRPRA-206ENST00000532259 GNMTQ14749 295 aa12.76□□□□□ -0.37
SRPRA-206ENST00000532259 SELENOHQ8IZQ5 122 aaKnown RBP12.76□□□□□ -0.37
SRPRA-206ENST00000532259 ZCCHC24Q8N2G6 241 aaKnown RBP12.76□□□□□ -0.37
SRPRA-206ENST00000532259 OR52L2PQ8NGH6 319 aa12.76□□□□□ -0.37
SRPRA-206ENST00000532259 ITLN1Q8WWA0 313 aa12.76□□□□□ -0.37
SRPRA-206ENST00000532259 DNTTIP1Q9H147 329 aa12.76□□□□□ -0.37
SRPRA-206ENST00000532259 RHOFQ9HBH0 211 aa12.76□□□□□ -0.37
SRPRA-206ENST00000532259 DNAJB11Q9UBS4 358 aa12.76□□□□□ -0.37
SRPRA-206ENST00000532259 GLS2Q9UI32 602 aa12.76□□□□□ -0.37
SRPRA-206ENST00000532259 SPEF1Q9Y4P9 236 aa12.76□□□□□ -0.37
SRPRA-206ENST00000532259 DEFB108AA8MXU0 73 aa12.76□□□□□ -0.37
SRPRA-206ENST00000532259 C12orf77C9JDV5 145 aa12.76□□□□□ -0.37
SRPRA-206ENST00000532259 PSG2P11465 335 aa12.76□□□□□ -0.37
SRPRA-206ENST00000532259 LYL1P12980 280 aa12.76□□□□□ -0.37
SRPRA-206ENST00000532259 CD40P25942 277 aa12.76□□□□□ -0.37
SRPRA-206ENST00000532259 GLRXP35754 106 aa12.76□□□□□ -0.37
SRPRA-206ENST00000532259 P2RX3P56373 397 aa12.76□□□□□ -0.37
SRPRA-206ENST00000532259 SMIM21Q3B7S5 101 aa12.76□□□□□ -0.37
SRPRA-206ENST00000532259 TGIF2LYQ8IUE0 185 aa12.76□□□□□ -0.37
SRPRA-206ENST00000532259 LRTM2Q8N967 370 aa12.76□□□□□ -0.37
SRPRA-206ENST00000532259 RBPMSQ93062 196 aaKnown RBP12.76□□□□□ -0.37
SRPRA-206ENST00000532259 ERGIC1Q969X5 290 aa12.76□□□□□ -0.37
SRPRA-206ENST00000532259 AQP10Q96PS8 301 aa12.76□□□□□ -0.37
SRPRA-206ENST00000532259 CABLES2Q9BTV7 478 aa12.76□□□□□ -0.37
SRPRA-206ENST00000532259 TMEM30CPA0ZSE6 113 aa12.75□□□□□ -0.37
SRPRA-206ENST00000532259 IGHV3-13P01766 116 aa12.75□□□□□ -0.37
SRPRA-206ENST00000532259 IGHV3-7P01780 117 aa12.75□□□□□ -0.37
SRPRA-206ENST00000532259 TMPRSS3P57727 454 aa12.75□□□□□ -0.37
SRPRA-206ENST00000532259 KRBOX4Q5JUW0 171 aa12.75□□□□□ -0.37
SRPRA-206ENST00000532259 REG4Q9BYZ8 158 aa12.75□□□□□ -0.37
SRPRA-206ENST00000532259 PFDN2Q9UHV9 154 aa12.75□□□□□ -0.37
SRPRA-206ENST00000532259 ZNF835Q9Y2P0 537 aa12.75□□□□□ -0.37
SRPRA-206ENST00000532259 RCL1Q9Y2P8 373 aaKnown RBP12.75□□□□□ -0.37
SRPRA-206ENST00000532259 C16orf97H3BN30 126 aa12.74□□□□□ -0.37
SRPRA-206ENST00000532259 ABCD4O14678 606 aa12.74□□□□□ -0.37
SRPRA-206ENST00000532259 SIGLEC5O15389 551 aa12.74□□□□□ -0.37
SRPRA-206ENST00000532259 IGLV2-14P01704 120 aa12.74□□□□□ -0.37
SRPRA-206ENST00000532259 TPT1P13693 172 aaKnown RBP12.74□□□□□ -0.37
SRPRA-206ENST00000532259 IL2RGP31785 369 aa12.74□□□□□ -0.37
SRPRA-206ENST00000532259 POLR2GP62487 172 aaKnown RBP eCLIP12.74□□□□□ -0.37
SRPRA-206ENST00000532259 OR2B11Q5JQS5 317 aa12.74□□□□□ -0.37
SRPRA-206ENST00000532259 CXorf66Q5JRM2 361 aaPredicted RBP12.74□□□□□ -0.37
SRPRA-206ENST00000532259 BAP18Q8IXM2 172 aa12.74□□□□□ -0.37
SRPRA-206ENST00000532259 FAM185AQ8N0U4 392 aa12.74□□□□□ -0.37
SRPRA-206ENST00000532259 ZNF808Q8N4W9 903 aaPredicted RBP12.74□□□□□ -0.37
SRPRA-206ENST00000532259 ZNRF1Q8ND25 227 aa12.74□□□□□ -0.37
SRPRA-206ENST00000532259 KCNIP1Q9NZI2 227 aa12.74□□□□□ -0.37
SRPRA-206ENST00000532259 FBXL17Q9UF56 701 aa12.74□□□□□ -0.37
SRPRA-206ENST00000532259 FBXO24O75426 580 aa12.74□□□□□ -0.37
SRPRA-206ENST00000532259 THBDP07204 575 aa12.74□□□□□ -0.37
SRPRA-206ENST00000532259 HOXD4P09016 255 aaPredicted RBP12.74□□□□□ -0.37
SRPRA-206ENST00000532259 SELLP14151 372 aa12.74□□□□□ -0.37
SRPRA-206ENST00000532259 PRDX2P32119 198 aa12.74□□□□□ -0.37
SRPRA-206ENST00000532259 PPP1CCP36873 323 aaKnown RBP12.74□□□□□ -0.37
SRPRA-206ENST00000532259 TMEM33P57088 247 aa12.74□□□□□ -0.37
SRPRA-206ENST00000532259 MRGPRGQ86SM5 289 aa12.74□□□□□ -0.37
SRPRA-206ENST00000532259 GCSAMQ8N6F7 178 aa12.74□□□□□ -0.37
SRPRA-206ENST00000532259 DEFB108BQ8NET1 73 aa12.74□□□□□ -0.37
SRPRA-206ENST00000532259 OR13A1Q8NGR1 328 aa12.74□□□□□ -0.37
SRPRA-206ENST00000532259 SHARPINQ9H0F6 387 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 146.7 ms