RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 EBPQ15125 230 aaKnown RBP2.52□□□□□ -2.01
PTPRK-220ENST00000531466 SSX1Q16384 188 aa2.52□□□□□ -2.01
PTPRK-220ENST00000531466 ATP6AP1LQ52LC2 224 aa2.52□□□□□ -2.01
PTPRK-220ENST00000531466 CLLU1Q5K131 121 aa2.52□□□□□ -2.01
PTPRK-220ENST00000531466 FAM162BQ5T6X4 162 aa2.52□□□□□ -2.01
PTPRK-220ENST00000531466 UGT2A3Q6UWM9 527 aa2.52□□□□□ -2.01
PTPRK-220ENST00000531466 ADAMTSL5Q6ZMM2 481 aa2.52□□□□□ -2.01
PTPRK-220ENST00000531466 FAM231DQ6ZW35 169 aa2.52□□□□□ -2.01
PTPRK-220ENST00000531466 STRADAQ7RTN6 431 aa2.52□□□□□ -2.01
PTPRK-220ENST00000531466 FAM19A1Q7Z5A9 133 aa2.52□□□□□ -2.01
PTPRK-220ENST00000531466 IFNEQ86WN2 208 aa2.52□□□□□ -2.01
PTPRK-220ENST00000531466 FAM24BQ8N5W8 94 aa2.52□□□□□ -2.01
PTPRK-220ENST00000531466 OR4C13Q8NGP0 309 aa2.52□□□□□ -2.01
PTPRK-220ENST00000531466 ZFAND1Q8TCF1 268 aa2.52□□□□□ -2.01
PTPRK-220ENST00000531466 GPR119Q8TDV5 335 aa2.52□□□□□ -2.01
PTPRK-220ENST00000531466 LCN9Q8WX39 176 aa2.52□□□□□ -2.01
PTPRK-220ENST00000531466 CRYGNQ8WXF5 182 aa2.52□□□□□ -2.01
PTPRK-220ENST00000531466 S100ZQ8WXG8 99 aa2.52□□□□□ -2.01
PTPRK-220ENST00000531466 SLC7A6Q92536 515 aa2.52□□□□□ -2.01
PTPRK-220ENST00000531466 DCUN1D4Q92564 292 aa2.52□□□□□ -2.01
PTPRK-220ENST00000531466 NDRG1Q92597 394 aaKnown RBP2.52□□□□□ -2.01
PTPRK-220ENST00000531466 DLX4Q92988 240 aaPredicted RBP2.52□□□□□ -2.01
PTPRK-220ENST00000531466 RBPMSQ93062 196 aaKnown RBP2.52□□□□□ -2.01
PTPRK-220ENST00000531466 FGGYQ96C11 551 aa2.52□□□□□ -2.01
PTPRK-220ENST00000531466 STARD4Q96DR4 205 aa2.52□□□□□ -2.01
PTPRK-220ENST00000531466 COL21A1Q96P44 957 aa2.52□□□□□ -2.01
PTPRK-220ENST00000531466 GPR82Q96P67 336 aa2.52□□□□□ -2.01
PTPRK-220ENST00000531466 RNF157Q96PX1 679 aa2.52□□□□□ -2.01
PTPRK-220ENST00000531466 RASL11BQ9BPW5 248 aa2.52□□□□□ -2.01
PTPRK-220ENST00000531466 PDCD1LG2Q9BQ51 273 aa2.52□□□□□ -2.01
PTPRK-220ENST00000531466 ZNF649Q9BS31 505 aa2.52□□□□□ -2.01
PTPRK-220ENST00000531466 AGMATQ9BSE5 352 aa2.52□□□□□ -2.01
PTPRK-220ENST00000531466 C1orf50Q9BV19 199 aa2.52□□□□□ -2.01
PTPRK-220ENST00000531466 PBDC1Q9BVG4 233 aa2.52□□□□□ -2.01
PTPRK-220ENST00000531466 SLC17A9Q9BYT1 436 aa2.52□□□□□ -2.01
PTPRK-220ENST00000531466 LINC00470Q9BZP3 86 aa2.52□□□□□ -2.01
PTPRK-220ENST00000531466 MS4A6AQ9H2W1 248 aa2.52□□□□□ -2.01
PTPRK-220ENST00000531466 PTGES2Q9H7Z7 377 aa2.52□□□□□ -2.01
PTPRK-220ENST00000531466 ELL3Q9HB65 397 aaPredicted RBP2.52□□□□□ -2.01
PTPRK-220ENST00000531466 MRPL16Q9NX20 251 aaKnown RBP2.52□□□□□ -2.01
PTPRK-220ENST00000531466 IDI2-AS1Q9NZ38 188 aa2.52□□□□□ -2.01
PTPRK-220ENST00000531466 ZNF230Q9UIE0 474 aaPredicted RBP2.52□□□□□ -2.01
PTPRK-220ENST00000531466 CES1P1Q9UKY3 287 aa2.52□□□□□ -2.01
PTPRK-220ENST00000531466 RAB22AQ9UL26 194 aa2.52□□□□□ -2.01
PTPRK-220ENST00000531466 SNX12Q9UMY4 172 aa2.52□□□□□ -2.01
PTPRK-220ENST00000531466 SCML2Q9UQR0 700 aa2.52□□□□□ -2.01
PTPRK-220ENST00000531466 POLR1DQ9Y2S0 133 aa2.52□□□□□ -2.01
PTPRK-220ENST00000531466 ZCCHC11Q5TAX3 1644 aaKnown RBP2.52□□□□□ -2.01
PTPRK-220ENST00000531466 COL22A1Q8NFW1 1626 aaPredicted RBP2.52□□□□□ -2.01
PTPRK-220ENST00000531466 HIVEP2P31629 2446 aa2.52□□□□□ -2.01
PTPRK-220ENST00000531466 INO80Q9ULG1 1556 aaPredicted RBP2.52□□□□□ -2.01
PTPRK-220ENST00000531466 FANCAO15360 1455 aa2.52□□□□□ -2.01
PTPRK-220ENST00000531466 CEP164Q9UPV0 1460 aa2.52□□□□□ -2.01
PTPRK-220ENST00000531466 NALCNQ8IZF0 1738 aa2.51□□□□□ -2.01
PTPRK-220ENST00000531466 METP08581 1390 aa2.51□□□□□ -2.01
PTPRK-220ENST00000531466 TRAV36DV7A0A075B6V5 113 aa2.51□□□□□ -2.01
PTPRK-220ENST00000531466 TRAV30A0A087WSZ9 112 aa2.51□□□□□ -2.01
PTPRK-220ENST00000531466 A0A087WUJ7 227 aa2.51□□□□□ -2.01
PTPRK-220ENST00000531466 A0A0J9YY10 115 aa2.51□□□□□ -2.01
PTPRK-220ENST00000531466 A0A1B0GX78 115 aa2.51□□□□□ -2.01
PTPRK-220ENST00000531466 A0A1W2PRE2 83 aa2.51□□□□□ -2.01
PTPRK-220ENST00000531466 OR4C46A6NHA9 309 aa2.51□□□□□ -2.01
PTPRK-220ENST00000531466 OR5B21A6NL26 309 aa2.51□□□□□ -2.01
PTPRK-220ENST00000531466 A8MWP6 167 aa2.51□□□□□ -2.01
PTPRK-220ENST00000531466 D6RAR5 112 aa2.51□□□□□ -2.01
PTPRK-220ENST00000531466 INMT-MINDY4F8WBC2 141 aa2.51□□□□□ -2.01
PTPRK-220ENST00000531466 J3QR89 54 aa2.51□□□□□ -2.01
PTPRK-220ENST00000531466 MFNGO00587 321 aa2.51□□□□□ -2.01
PTPRK-220ENST00000531466 GABRPO00591 440 aa2.51□□□□□ -2.01
PTPRK-220ENST00000531466 OR7C2O60412 319 aa2.51□□□□□ -2.01
PTPRK-220ENST00000531466 ZNF780AO75290 641 aaPredicted RBP2.51□□□□□ -2.01
PTPRK-220ENST00000531466 FKBP6O75344 327 aa2.51□□□□□ -2.01
PTPRK-220ENST00000531466 CA11O75493 328 aa2.51□□□□□ -2.01
PTPRK-220ENST00000531466 EEDO75530 441 aaKnown RBP2.51□□□□□ -2.01
PTPRK-220ENST00000531466 CDRT1O95170 752 aa2.51□□□□□ -2.01
PTPRK-220ENST00000531466 HBZP02008 142 aa2.51□□□□□ -2.01
PTPRK-220ENST00000531466 CTSLP07711 333 aa2.51□□□□□ -2.01
PTPRK-220ENST00000531466 UCHL1P09936 223 aa2.51□□□□□ -2.01
PTPRK-220ENST00000531466 OR9G9P0C7N8 305 aa2.51□□□□□ -2.01
PTPRK-220ENST00000531466 OR5H8P0DN80 308 aa2.51□□□□□ -2.01
PTPRK-220ENST00000531466 SDC1P18827 310 aa2.51□□□□□ -2.01
PTPRK-220ENST00000531466 ATF1P18846 271 aa2.51□□□□□ -2.01
PTPRK-220ENST00000531466 ETV6P41212 452 aa2.51□□□□□ -2.01
PTPRK-220ENST00000531466 RPS28P62857 69 aaKnown RBP2.51□□□□□ -2.01
PTPRK-220ENST00000531466 CDK5Q00535 292 aa2.51□□□□□ -2.01
PTPRK-220ENST00000531466 RUNX1Q01196 453 aa2.51□□□□□ -2.01
PTPRK-220ENST00000531466 RAB40BQ12829 278 aa2.51□□□□□ -2.01
PTPRK-220ENST00000531466 OR5I1Q13606 314 aa2.51□□□□□ -2.01
PTPRK-220ENST00000531466 HTR4Q13639 388 aa2.51□□□□□ -2.01
PTPRK-220ENST00000531466 OR8B8Q15620 311 aa2.51□□□□□ -2.01
PTPRK-220ENST00000531466 UBE2V2Q15819 145 aa2.51□□□□□ -2.01
PTPRK-220ENST00000531466 BATFQ16520 125 aa2.51□□□□□ -2.01
PTPRK-220ENST00000531466 MICAQ29983 383 aa2.51□□□□□ -2.01
PTPRK-220ENST00000531466 LRRC26Q2I0M4 334 aa2.51□□□□□ -2.01
PTPRK-220ENST00000531466 IAH1Q2TAA2 248 aaPredicted RBP2.51□□□□□ -2.01
PTPRK-220ENST00000531466 MORN2Q502X0 79 aa2.51□□□□□ -2.01
PTPRK-220ENST00000531466 NANOGP8Q6NSW7 305 aa2.51□□□□□ -2.01
PTPRK-220ENST00000531466 UNQ9370/PRO34162Q6UXP9 181 aa2.51□□□□□ -2.01
PTPRK-220ENST00000531466 C12orf54Q6X4T0 127 aa2.51□□□□□ -2.01
PTPRK-220ENST00000531466 FBXW12Q6X9E4 464 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms