RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 PRAMEF5Q5TYX0 476 aa15.68■□□□□ 0.1
SMPD1-205ENST00000531303 FAM53AQ6NSI3 398 aaPredicted RBP15.68■□□□□ 0.1
SMPD1-205ENST00000531303 OR5AP2Q8NGF4 316 aa15.68■□□□□ 0.1
SMPD1-205ENST00000531303 C8orf46Q8TAG6 207 aa15.68■□□□□ 0.1
SMPD1-205ENST00000531303 TINAGL1Q9GZM7 467 aaPredicted RBP15.68■□□□□ 0.1
SMPD1-205ENST00000531303 VPS13CQ709C8 3753 aa15.67■□□□□ 0.1
SMPD1-205ENST00000531303 IGHV3-43A0A0B4J1X8 118 aa15.67■□□□□ 0.1
SMPD1-205ENST00000531303 IGKV1-6A0A0C4DH72 117 aa15.67■□□□□ 0.1
SMPD1-205ENST00000531303 SMAD7O15105 426 aaKnown RBP15.67■□□□□ 0.1
SMPD1-205ENST00000531303 RAB3DO95716 219 aa15.67■□□□□ 0.1
SMPD1-205ENST00000531303 LIPFP07098 398 aa15.67■□□□□ 0.1
SMPD1-205ENST00000531303 AKAIN1P0CW23 69 aa15.67■□□□□ 0.1
SMPD1-205ENST00000531303 IGHV3-43DP0DP04 118 aa15.67■□□□□ 0.1
SMPD1-205ENST00000531303 NFYBP25208 207 aa15.67■□□□□ 0.1
SMPD1-205ENST00000531303 TAS2R46P59540 309 aa15.67■□□□□ 0.1
SMPD1-205ENST00000531303 ARF6P62330 175 aa15.67■□□□□ 0.1
SMPD1-205ENST00000531303 HERPUD1Q15011 391 aa15.67■□□□□ 0.1
SMPD1-205ENST00000531303 RNASE10Q5GAN6 216 aaKnown RBP15.67■□□□□ 0.1
SMPD1-205ENST00000531303 LY6G5BQ8NDX9 201 aa15.67■□□□□ 0.1
SMPD1-205ENST00000531303 OR4A4PQ8NGN8 299 aa15.67■□□□□ 0.1
SMPD1-205ENST00000531303 GALMQ96C23 342 aa15.67■□□□□ 0.1
SMPD1-205ENST00000531303 COX4I2Q96KJ9 171 aa15.67■□□□□ 0.1
SMPD1-205ENST00000531303 GAL3ST2Q9H3Q3 398 aa15.67■□□□□ 0.1
SMPD1-205ENST00000531303 TAS2R3Q9NYW6 316 aa15.67■□□□□ 0.1
SMPD1-205ENST00000531303 EHFQ9NZC4 300 aa15.67■□□□□ 0.1
SMPD1-205ENST00000531303 HSPA12AO43301 675 aa15.66■□□□□ 0.1
SMPD1-205ENST00000531303 ENSAO43768 121 aaKnown RBP15.66■□□□□ 0.1
SMPD1-205ENST00000531303 MMP23AO75900 390 aa15.66■□□□□ 0.1
SMPD1-205ENST00000531303 PRB3Q04118 309 aaPredicted RBP15.66■□□□□ 0.1
SMPD1-205ENST00000531303 DCTN2Q13561 401 aaKnown RBP15.66■□□□□ 0.1
SMPD1-205ENST00000531303 CDK10Q15131 360 aa15.66■□□□□ 0.1
SMPD1-205ENST00000531303 CIARTQ8N365 385 aaPredicted RBP15.66■□□□□ 0.1
SMPD1-205ENST00000531303 OR52L2PQ8NGH6 319 aa15.66■□□□□ 0.1
SMPD1-205ENST00000531303 OR10V1Q8NGI7 309 aa15.66■□□□□ 0.1
SMPD1-205ENST00000531303 OR4C16Q8NGL9 310 aa15.66■□□□□ 0.1
SMPD1-205ENST00000531303 HRASLSQ9HDD0 168 aa15.66■□□□□ 0.1
SMPD1-205ENST00000531303 NECAP2Q9NVZ3 263 aa15.66■□□□□ 0.1
SMPD1-205ENST00000531303 MCUBQ9NWR8 336 aa15.66■□□□□ 0.1
SMPD1-205ENST00000531303 OR1A1Q9P1Q5 309 aa15.66■□□□□ 0.1
SMPD1-205ENST00000531303 SLC23A1Q9UHI7 598 aa15.66■□□□□ 0.1
SMPD1-205ENST00000531303 OPN4Q9UHM6 478 aa15.66■□□□□ 0.1
SMPD1-205ENST00000531303 CREBBPQ92793 2442 aa15.66■□□□□ 0.1
SMPD1-205ENST00000531303 IGHV2-70DA0A0C4DH43 119 aa15.65■□□□□ 0.1
SMPD1-205ENST00000531303 A0A1W2PPH5 198 aa15.65■□□□□ 0.1
SMPD1-205ENST00000531303 FAM172BPA6NC97 362 aa15.65■□□□□ 0.1
SMPD1-205ENST00000531303 IGHV3-7P01780 117 aa15.65■□□□□ 0.1
SMPD1-205ENST00000531303 DLX1P56177 255 aa15.65■□□□□ 0.1
SMPD1-205ENST00000531303 DLX6P56179 175 aa15.65■□□□□ 0.1
SMPD1-205ENST00000531303 ACTBL2Q562R1 376 aa15.65■□□□□ 0.1
SMPD1-205ENST00000531303 ZNF782Q6ZMW2 699 aaPredicted RBP15.65■□□□□ 0.1
SMPD1-205ENST00000531303 OR56B4Q8NH76 319 aa15.65■□□□□ 0.1
SMPD1-205ENST00000531303 GINS4Q9BRT9 223 aa15.65■□□□□ 0.1
SMPD1-205ENST00000531303 TMPRSS13Q9BYE2 586 aa15.65■□□□□ 0.1
SMPD1-205ENST00000531303 OR2S2Q9NQN1 319 aa15.65■□□□□ 0.1
SMPD1-205ENST00000531303 IDI2-AS1Q9NZ38 188 aa15.65■□□□□ 0.1
SMPD1-205ENST00000531303 ZNF107Q9UII5 783 aaPredicted RBP15.65■□□□□ 0.1
SMPD1-205ENST00000531303 B4DSR2 109 aa15.65■□□□□ 0.1
SMPD1-205ENST00000531303 PLA2G10O15496 165 aa15.65■□□□□ 0.1
SMPD1-205ENST00000531303 CD74P04233 296 aa15.65■□□□□ 0.1
SMPD1-205ENST00000531303 AMY2AP04746 511 aa15.65■□□□□ 0.1
SMPD1-205ENST00000531303 IFNA6P05013 189 aa15.65■□□□□ 0.1
SMPD1-205ENST00000531303 MSMBP08118 114 aa15.65■□□□□ 0.1
SMPD1-205ENST00000531303 OR5H8P0DN80 308 aa15.65■□□□□ 0.1
SMPD1-205ENST00000531303 NFYAP23511 347 aaPredicted RBP15.65■□□□□ 0.1
SMPD1-205ENST00000531303 TSPAN5P62079 268 aa15.65■□□□□ 0.1
SMPD1-205ENST00000531303 PAX2Q02962 417 aa15.65■□□□□ 0.1
SMPD1-205ENST00000531303 GNMTQ14749 295 aa15.65■□□□□ 0.1
SMPD1-205ENST00000531303 C11orf91Q3C1V1 193 aa15.65■□□□□ 0.1
SMPD1-205ENST00000531303 ZNF554Q86TJ5 538 aa15.65■□□□□ 0.1
SMPD1-205ENST00000531303 OR10J5Q8NHC4 309 aa15.65■□□□□ 0.1
SMPD1-205ENST00000531303 LEAP2Q969E1 77 aa15.65■□□□□ 0.1
SMPD1-205ENST00000531303 SLC6A7Q99884 636 aa15.65■□□□□ 0.1
SMPD1-205ENST00000531303 GNG12Q9UBI6 72 aa15.65■□□□□ 0.1
SMPD1-205ENST00000531303 TBC1D24Q9ULP9 559 aa15.65■□□□□ 0.1
SMPD1-205ENST00000531303 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.64■□□□□ 0.09
SMPD1-205ENST00000531303 NPIPB11E5RHQ5 1161 aa15.64■□□□□ 0.09
SMPD1-205ENST00000531303 FPR2P25090 351 aa15.64■□□□□ 0.09
SMPD1-205ENST00000531303 PPP1CCP36873 323 aaKnown RBP15.64■□□□□ 0.09
SMPD1-205ENST00000531303 CEACAM6P40199 344 aa15.64■□□□□ 0.09
SMPD1-205ENST00000531303 TMEM249Q2WGJ8 235 aa15.64■□□□□ 0.09
SMPD1-205ENST00000531303 UTF1Q5T230 341 aa15.64■□□□□ 0.09
SMPD1-205ENST00000531303 BTNL3Q6UXE8 466 aa15.64■□□□□ 0.09
SMPD1-205ENST00000531303 LINC01356Q8N9X3 169 aa15.64■□□□□ 0.09
SMPD1-205ENST00000531303 CABLES2Q9BTV7 478 aa15.64■□□□□ 0.09
SMPD1-205ENST00000531303 SUCNR1Q9BXA5 334 aa15.64■□□□□ 0.09
SMPD1-205ENST00000531303 C17orf98A8MV24 154 aa15.63■□□□□ 0.09
SMPD1-205ENST00000531303 F2RL2O00254 374 aa15.63■□□□□ 0.09
SMPD1-205ENST00000531303 LYRM1O43325 122 aa15.63■□□□□ 0.09
SMPD1-205ENST00000531303 CTXN2P0C2S0 81 aa15.63■□□□□ 0.09
SMPD1-205ENST00000531303 TBPP20226 339 aa15.63■□□□□ 0.09
SMPD1-205ENST00000531303 FAUP35544 74 aaKnown RBP15.63■□□□□ 0.09
SMPD1-205ENST00000531303 DVL1P1P54792 670 aaPredicted RBP15.63■□□□□ 0.09
SMPD1-205ENST00000531303 DYRK1AQ13627 763 aa15.63■□□□□ 0.09
SMPD1-205ENST00000531303 MEF2DQ14814 521 aa15.63■□□□□ 0.09
SMPD1-205ENST00000531303 SCGB2B2Q4G0G5 96 aa15.63■□□□□ 0.09
SMPD1-205ENST00000531303 HEPN1Q6WQI6 88 aa15.63■□□□□ 0.09
SMPD1-205ENST00000531303 OVCH2Q7RTZ1 564 aa15.63■□□□□ 0.09
SMPD1-205ENST00000531303 C11orf42Q8N5U0 333 aa15.63■□□□□ 0.09
SMPD1-205ENST00000531303 DACT3Q96B18 629 aaPredicted RBP15.63■□□□□ 0.09
SMPD1-205ENST00000531303 MSI2Q96DH6 328 aaKnown RBP15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms