RNA–Protein interactions for RNA: ENST00000531032.5

VPS28-214, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 1 (best)

Gene VPS28, Length 573 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-214ENST00000531032 Q8N9W7 124 aa8.92□□□□□ -0.98
VPS28-214ENST00000531032 BPIFB6Q8NFQ5 453 aa8.92□□□□□ -0.98
VPS28-214ENST00000531032 OR2T10Q8NGZ9 312 aa8.92□□□□□ -0.98
VPS28-214ENST00000531032 RTN4IP1Q8WWV3 396 aaPredicted RBP8.92□□□□□ -0.98
VPS28-214ENST00000531032 ST6GALNAC6Q969X2 333 aa8.92□□□□□ -0.98
VPS28-214ENST00000531032 WWC2-AS2Q96NR7 200 aa8.92□□□□□ -0.98
VPS28-214ENST00000531032 PAK1IP1Q9NWT1 392 aaPredicted RBP8.92□□□□□ -0.98
VPS28-214ENST00000531032 GFOD1Q9NXC2 390 aa8.92□□□□□ -0.98
VPS28-214ENST00000531032 CNOT2Q9NZN8 540 aaKnown RBP8.92□□□□□ -0.98
VPS28-214ENST00000531032 ZMAT5Q9UDW3 170 aaKnown RBP8.92□□□□□ -0.98
VPS28-214ENST00000531032 CLEC2DQ9UHP7 191 aa8.92□□□□□ -0.98
VPS28-214ENST00000531032 NCBP2LA6PVI3 153 aaKnown RBP8.91□□□□□ -0.98
VPS28-214ENST00000531032 CCL24O00175 119 aa8.91□□□□□ -0.98
VPS28-214ENST00000531032 SDCBPO00560 298 aaPredicted RBP8.91□□□□□ -0.98
VPS28-214ENST00000531032 ZNF780AO75290 641 aaPredicted RBP8.91□□□□□ -0.98
VPS28-214ENST00000531032 MOSP00540 346 aa8.91□□□□□ -0.98
VPS28-214ENST00000531032 CSTBP04080 98 aaKnown RBP8.91□□□□□ -0.98
VPS28-214ENST00000531032 RPLP1P05386 114 aaKnown RBP8.91□□□□□ -0.98
VPS28-214ENST00000531032 GNAO1P09471 354 aa8.91□□□□□ -0.98
VPS28-214ENST00000531032 SERPINA2P20848 420 aa8.91□□□□□ -0.98
VPS28-214ENST00000531032 CD1BP29016 333 aa8.91□□□□□ -0.98
VPS28-214ENST00000531032 BDKRB2P30411 391 aa8.91□□□□□ -0.98
VPS28-214ENST00000531032 GP2P55259 537 aaKnown RBP8.91□□□□□ -0.98
VPS28-214ENST00000531032 FOXE3Q13461 319 aa8.91□□□□□ -0.98
VPS28-214ENST00000531032 RIPK1Q13546 671 aa8.91□□□□□ -0.98
VPS28-214ENST00000531032 PNLIPRP3Q17RR3 467 aa8.91□□□□□ -0.98
VPS28-214ENST00000531032 Q3ZCU0 254 aa8.91□□□□□ -0.98
VPS28-214ENST00000531032 FAM53AQ6NSI3 398 aaPredicted RBP8.91□□□□□ -0.98
VPS28-214ENST00000531032 ZNF497Q6ZNH5 498 aa8.91□□□□□ -0.98
VPS28-214ENST00000531032 OR13C5Q8NGS8 318 aa8.91□□□□□ -0.98
VPS28-214ENST00000531032 OR8U1Q8NH10 309 aa8.91□□□□□ -0.98
VPS28-214ENST00000531032 GGHQ92820 318 aa8.91□□□□□ -0.98
VPS28-214ENST00000531032 ARL11Q969Q4 196 aa8.91□□□□□ -0.98
VPS28-214ENST00000531032 DUX3Q96PT4 197 aa8.91□□□□□ -0.98
VPS28-214ENST00000531032 GON7Q9BXV9 100 aa8.91□□□□□ -0.98
VPS28-214ENST00000531032 DCLRE1BQ9H816 532 aa8.91□□□□□ -0.98
VPS28-214ENST00000531032 PLSCR3Q9NRY6 295 aa8.91□□□□□ -0.98
VPS28-214ENST00000531032 ING4Q9UNL4 249 aa8.91□□□□□ -0.98
VPS28-214ENST00000531032 OGG1O15527 345 aa8.9□□□□□ -0.98
VPS28-214ENST00000531032 TXNL1O43396 289 aa8.9□□□□□ -0.98
VPS28-214ENST00000531032 RAMP3O60896 148 aa8.9□□□□□ -0.98
VPS28-214ENST00000531032 MT-ND4P03905 459 aa8.9□□□□□ -0.98
VPS28-214ENST00000531032 ELANEP08246 267 aa8.9□□□□□ -0.98
VPS28-214ENST00000531032 VSIG8P0DPA2 414 aa8.9□□□□□ -0.98
VPS28-214ENST00000531032 GTF2F2P13984 249 aa8.9□□□□□ -0.98
VPS28-214ENST00000531032 IGFBP3P17936 291 aaPredicted RBP8.9□□□□□ -0.98
VPS28-214ENST00000531032 IL3RAP26951 378 aa8.9□□□□□ -0.98
VPS28-214ENST00000531032 CDX1P47902 265 aaPredicted RBP8.9□□□□□ -0.98
VPS28-214ENST00000531032 ZNF137PP52743 207 aa8.9□□□□□ -0.98
VPS28-214ENST00000531032 CFHR3Q02985 330 aa8.9□□□□□ -0.98
VPS28-214ENST00000531032 GPR50Q13585 617 aa8.9□□□□□ -0.98
VPS28-214ENST00000531032 KIR2DS1Q14954 304 aa8.9□□□□□ -0.98
VPS28-214ENST00000531032 Q499Y3 187 aa8.9□□□□□ -0.98
VPS28-214ENST00000531032 YIF1BQ5BJH7 314 aa8.9□□□□□ -0.98
VPS28-214ENST00000531032 CXorf66Q5JRM2 361 aaPredicted RBP8.9□□□□□ -0.98
VPS28-214ENST00000531032 ATAD3CQ5T2N8 411 aa8.9□□□□□ -0.98
VPS28-214ENST00000531032 SLC25A48Q6ZT89 311 aaKnown RBP8.9□□□□□ -0.98
VPS28-214ENST00000531032 FAM71E2Q8N5Q1 922 aa8.9□□□□□ -0.98
VPS28-214ENST00000531032 OR8H1Q8NGG4 311 aa8.9□□□□□ -0.98
VPS28-214ENST00000531032 UBALD1Q8TB05 177 aa8.9□□□□□ -0.98
VPS28-214ENST00000531032 CCDC107Q8WV48 283 aa8.9□□□□□ -0.98
VPS28-214ENST00000531032 GHSRQ92847 366 aa8.9□□□□□ -0.98
VPS28-214ENST00000531032 S1PR3Q99500 378 aa8.9□□□□□ -0.98
VPS28-214ENST00000531032 RCC2Q9P258 522 aaKnown RBP8.9□□□□□ -0.98
VPS28-214ENST00000531032 NKX1-2Q9UD57 310 aaPredicted RBP8.9□□□□□ -0.98
VPS28-214ENST00000531032 ZNF580Q9UK33 172 aa8.9□□□□□ -0.98
VPS28-214ENST00000531032 ERGIC3Q9Y282 383 aa8.9□□□□□ -0.98
VPS28-214ENST00000531032 SIRT4Q9Y6E7 314 aaPredicted RBP8.9□□□□□ -0.98
VPS28-214ENST00000531032 IGHV3-43A0A0B4J1X8 118 aa8.89□□□□□ -0.99
VPS28-214ENST00000531032 TRBV5-5A0A0J9YX44 114 aa8.89□□□□□ -0.99
VPS28-214ENST00000531032 A0A1W2PP11 408 aa8.89□□□□□ -0.99
VPS28-214ENST00000531032 MAGEA13PA6NCF6 341 aa8.89□□□□□ -0.99
VPS28-214ENST00000531032 ZNF736B4DX44 427 aaPredicted RBP8.89□□□□□ -0.99
VPS28-214ENST00000531032 C12orf77C9JDV5 145 aa8.89□□□□□ -0.99
VPS28-214ENST00000531032 AIPO00170 330 aa8.89□□□□□ -0.99
VPS28-214ENST00000531032 SLC31A2O15432 143 aa8.89□□□□□ -0.99
VPS28-214ENST00000531032 RRP9O43818 475 aaKnown RBP8.89□□□□□ -0.99
VPS28-214ENST00000531032 GPX5O75715 221 aa8.89□□□□□ -0.99
VPS28-214ENST00000531032 LALBAP00709 142 aa8.89□□□□□ -0.99
VPS28-214ENST00000531032 IGHG4P01861 327 aa8.89□□□□□ -0.99
VPS28-214ENST00000531032 NHLRC4P0CG21 123 aaPredicted RBP8.89□□□□□ -0.99
VPS28-214ENST00000531032 IGHV3-43DP0DP04 118 aa8.89□□□□□ -0.99
VPS28-214ENST00000531032 LUMP51884 338 aaPredicted RBP8.89□□□□□ -0.99
VPS28-214ENST00000531032 WNT4P56705 351 aa8.89□□□□□ -0.99
VPS28-214ENST00000531032 GPR176Q14439 515 aa8.89□□□□□ -0.99
VPS28-214ENST00000531032 DEFB136Q30KP8 78 aa8.89□□□□□ -0.99
VPS28-214ENST00000531032 TMEM30BQ3MIR4 351 aa8.89□□□□□ -0.99
VPS28-214ENST00000531032 SLC22A6Q4U2R8 563 aa8.89□□□□□ -0.99
VPS28-214ENST00000531032 DMKNQ6E0U4 476 aaPredicted RBP8.89□□□□□ -0.99
VPS28-214ENST00000531032 LCNL1Q6ZST4 164 aa8.89□□□□□ -0.99
VPS28-214ENST00000531032 JAGN1Q8N5M9 183 aa8.89□□□□□ -0.99
VPS28-214ENST00000531032 ZNF439Q8NDP4 499 aa8.89□□□□□ -0.99
VPS28-214ENST00000531032 OR5M8Q8NGP6 311 aa8.89□□□□□ -0.99
VPS28-214ENST00000531032 NEK7Q8TDX7 302 aa8.89□□□□□ -0.99
VPS28-214ENST00000531032 THRSPQ92748 146 aa8.89□□□□□ -0.99
VPS28-214ENST00000531032 TFAP2CQ92754 450 aa8.89□□□□□ -0.99
VPS28-214ENST00000531032 ORAI1Q96D31 301 aa8.89□□□□□ -0.99
VPS28-214ENST00000531032 ZNF184Q99676 751 aaPredicted RBP8.89□□□□□ -0.99
VPS28-214ENST00000531032 RASL11BQ9BPW5 248 aa8.89□□□□□ -0.99
VPS28-214ENST00000531032 HSPB9Q9BQS6 159 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms