RNA–Protein interactions for RNA: ENST00000529828.5

PTPRC-213, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 2,336 nt, Biotype non stop decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-213ENST00000529828 ERP29P30040 261 aaKnown RBP2.73□□□□□ -1.97
PTPRC-213ENST00000529828 SSTR5P35346 364 aa2.73□□□□□ -1.97
PTPRC-213ENST00000529828 VEGFCP49767 419 aa2.73□□□□□ -1.97
PTPRC-213ENST00000529828 HMGA2P52926 109 aa2.73□□□□□ -1.97
PTPRC-213ENST00000529828 CXCR4P61073 352 aa2.73□□□□□ -1.97
PTPRC-213ENST00000529828 CFHR3Q02985 330 aa2.73□□□□□ -1.97
PTPRC-213ENST00000529828 ZNF616Q08AN1 781 aa2.73□□□□□ -1.97
PTPRC-213ENST00000529828 MADCAM1Q13477 382 aa2.73□□□□□ -1.97
PTPRC-213ENST00000529828 DYRK1AQ13627 763 aa2.73□□□□□ -1.97
PTPRC-213ENST00000529828 MICAQ29983 383 aa2.73□□□□□ -1.97
PTPRC-213ENST00000529828 FAM209BQ5JX69 171 aa2.73□□□□□ -1.97
PTPRC-213ENST00000529828 C6orf183Q5T699 404 aa2.73□□□□□ -1.97
PTPRC-213ENST00000529828 LCN1P1Q5VSP4 162 aa2.73□□□□□ -1.97
PTPRC-213ENST00000529828 UTS2BQ765I0 119 aa2.73□□□□□ -1.97
PTPRC-213ENST00000529828 KCTD20Q7Z5Y7 419 aa2.73□□□□□ -1.97
PTPRC-213ENST00000529828 ZNF429Q86V71 674 aa2.73□□□□□ -1.97
PTPRC-213ENST00000529828 Q8N9W7 124 aa2.73□□□□□ -1.97
PTPRC-213ENST00000529828 OR13A1Q8NGR1 328 aa2.73□□□□□ -1.97
PTPRC-213ENST00000529828 OR10X1Q8NGY0 326 aa2.73□□□□□ -1.97
PTPRC-213ENST00000529828 OR9G1Q8NH87 305 aa2.73□□□□□ -1.97
PTPRC-213ENST00000529828 CREB3L1Q96BA8 519 aa2.73□□□□□ -1.97
PTPRC-213ENST00000529828 EAF1Q96JC9 268 aaPredicted RBP2.73□□□□□ -1.97
PTPRC-213ENST00000529828 SPACA5Q96QH8 159 aa2.73□□□□□ -1.97
PTPRC-213ENST00000529828 FEVQ99581 238 aa2.73□□□□□ -1.97
PTPRC-213ENST00000529828 TBX5Q99593 518 aa2.73□□□□□ -1.97
PTPRC-213ENST00000529828 ABCG5Q9H222 651 aa2.73□□□□□ -1.97
PTPRC-213ENST00000529828 VCXQ9H320 206 aa2.73□□□□□ -1.97
PTPRC-213ENST00000529828 CALYQ9NYX4 217 aa2.73□□□□□ -1.97
PTPRC-213ENST00000529828 DNAJB9Q9UBS3 223 aa2.73□□□□□ -1.97
PTPRC-213ENST00000529828 GLS2Q9UI32 602 aa2.73□□□□□ -1.97
PTPRC-213ENST00000529828 SPATA2Q9UM82 520 aa2.73□□□□□ -1.97
PTPRC-213ENST00000529828 PSG11Q9UQ72 335 aa2.73□□□□□ -1.97
PTPRC-213ENST00000529828 ERGIC3Q9Y282 383 aa2.73□□□□□ -1.97
PTPRC-213ENST00000529828 MYRFQ9Y2G1 1151 aa2.73□□□□□ -1.97
PTPRC-213ENST00000529828 AMMECR1Q9Y4X0 333 aaPredicted RBP2.73□□□□□ -1.97
PTPRC-213ENST00000529828 SIRT4Q9Y6E7 314 aaPredicted RBP2.73□□□□□ -1.97
PTPRC-213ENST00000529828 R4GMQ9 66 aa2.73□□□□□ -1.97
PTPRC-213ENST00000529828 TNCP24821 2201 aa2.72□□□□□ -1.97
PTPRC-213ENST00000529828 IGHV1-3A0A0C4DH29 117 aa2.72□□□□□ -1.97
PTPRC-213ENST00000529828 IGKV1-12A0A0C4DH73 117 aa2.72□□□□□ -1.97
PTPRC-213ENST00000529828 TRBV2A0A0J9YWF9 115 aa2.72□□□□□ -1.97
PTPRC-213ENST00000529828 KBTBD11-OT1A0A1B0GTJ5 212 aa2.72□□□□□ -1.97
PTPRC-213ENST00000529828 EFCAB10A6NFE3 127 aa2.72□□□□□ -1.97
PTPRC-213ENST00000529828 G3V318 75 aa2.72□□□□□ -1.97
PTPRC-213ENST00000529828 I3L521 148 aa2.72□□□□□ -1.97
PTPRC-213ENST00000529828 SYT7O43581 403 aa2.72□□□□□ -1.97
PTPRC-213ENST00000529828 DCTN3O75935 186 aa2.72□□□□□ -1.97
PTPRC-213ENST00000529828 APOL3O95236 402 aa2.72□□□□□ -1.97
PTPRC-213ENST00000529828 LY6G6CO95867 125 aa2.72□□□□□ -1.97
PTPRC-213ENST00000529828 IGKV1D-12P01611 117 aa2.72□□□□□ -1.97
PTPRC-213ENST00000529828 STAG3L3P0CL85 134 aa2.72□□□□□ -1.97
PTPRC-213ENST00000529828 ARSBP15848 533 aa2.72□□□□□ -1.97
PTPRC-213ENST00000529828 RAB4AP20338 218 aa2.72□□□□□ -1.97
PTPRC-213ENST00000529828 PSMB8P28062 276 aa2.72□□□□□ -1.97
PTPRC-213ENST00000529828 PRDX6P30041 224 aa2.72□□□□□ -1.97
PTPRC-213ENST00000529828 RAB7AP51149 207 aa2.72□□□□□ -1.97
PTPRC-213ENST00000529828 INSL3P51460 131 aa2.72□□□□□ -1.97
PTPRC-213ENST00000529828 FUT6P51993 359 aa2.72□□□□□ -1.97
PTPRC-213ENST00000529828 ROM1Q03395 351 aa2.72□□□□□ -1.97
PTPRC-213ENST00000529828 ZNF146Q15072 292 aa2.72□□□□□ -1.97
PTPRC-213ENST00000529828 HAGHQ16775 308 aa2.72□□□□□ -1.97
PTPRC-213ENST00000529828 KCTD21Q4G0X4 260 aa2.72□□□□□ -1.97
PTPRC-213ENST00000529828 DNAL1Q4LDG9 190 aa2.72□□□□□ -1.97
PTPRC-213ENST00000529828 ZNF322Q6U7Q0 402 aaPredicted RBP2.72□□□□□ -1.97
PTPRC-213ENST00000529828 SSX6Q7RTT6 188 aa2.72□□□□□ -1.97
PTPRC-213ENST00000529828 TGIF2LXQ8IUE1 241 aa2.72□□□□□ -1.97
PTPRC-213ENST00000529828 ENTHD1Q8IYW4 607 aa2.72□□□□□ -1.97
PTPRC-213ENST00000529828 ELMOD2Q8IZ81 293 aa2.72□□□□□ -1.97
PTPRC-213ENST00000529828 HS3ST5Q8IZT8 346 aa2.72□□□□□ -1.97
PTPRC-213ENST00000529828 RDH10Q8IZV5 341 aa2.72□□□□□ -1.97
PTPRC-213ENST00000529828 ARHGAP24Q8N264 748 aa2.72□□□□□ -1.97
PTPRC-213ENST00000529828 RNF152Q8N8N0 203 aa2.72□□□□□ -1.97
PTPRC-213ENST00000529828 MINDY2Q8NBR6 621 aa2.72□□□□□ -1.97
PTPRC-213ENST00000529828 MRGPRDQ8TDS7 321 aa2.72□□□□□ -1.97
PTPRC-213ENST00000529828 CORO2AQ92828 525 aa2.72□□□□□ -1.97
PTPRC-213ENST00000529828 ST6GALNAC6Q969X2 333 aa2.72□□□□□ -1.97
PTPRC-213ENST00000529828 RASL11BQ9BPW5 248 aa2.72□□□□□ -1.97
PTPRC-213ENST00000529828 SPATA25Q9BR10 227 aa2.72□□□□□ -1.97
PTPRC-213ENST00000529828 RSRP1Q9BUV0 290 aa2.72□□□□□ -1.97
PTPRC-213ENST00000529828 MOB1AQ9H8S9 216 aa2.72□□□□□ -1.97
PTPRC-213ENST00000529828 REEP1Q9H902 201 aa2.72□□□□□ -1.97
PTPRC-213ENST00000529828 HMG20AQ9NP66 347 aa2.72□□□□□ -1.97
PTPRC-213ENST00000529828 DIABLOQ9NR28 239 aa2.72□□□□□ -1.97
PTPRC-213ENST00000529828 PCDHB16Q9NRJ7 776 aa2.72□□□□□ -1.97
PTPRC-213ENST00000529828 LIN7CQ9NUP9 197 aaKnown RBP2.72□□□□□ -1.97
PTPRC-213ENST00000529828 IDI2-AS1Q9NZ38 188 aa2.72□□□□□ -1.97
PTPRC-213ENST00000529828 MRM2Q9UI43 246 aaKnown RBP2.72□□□□□ -1.97
PTPRC-213ENST00000529828 KIF25Q9UIL4 384 aa2.72□□□□□ -1.97
PTPRC-213ENST00000529828 IGHV4OR15-8A0A075B7B6 117 aa2.71□□□□□ -1.97
PTPRC-213ENST00000529828 A0A087WW49 117 aa2.71□□□□□ -1.97
PTPRC-213ENST00000529828 MEIKINA0A087WXM9 373 aa2.71□□□□□ -1.97
PTPRC-213ENST00000529828 IGHV3-43A0A0B4J1X8 118 aa2.71□□□□□ -1.97
PTPRC-213ENST00000529828 IGKV1-9A0A0C4DH69 117 aa2.71□□□□□ -1.97
PTPRC-213ENST00000529828 LOC107986453A0A1B0GWG9 222 aa2.71□□□□□ -1.97
PTPRC-213ENST00000529828 FUOMA2VDF0 154 aa2.71□□□□□ -1.97
PTPRC-213ENST00000529828 MAGEA13PA6NCF6 341 aa2.71□□□□□ -1.97
PTPRC-213ENST00000529828 C5orf51A6NDU8 294 aa2.71□□□□□ -1.97
PTPRC-213ENST00000529828 ZNF729A6NN14 1252 aaPredicted RBP2.71□□□□□ -1.97
PTPRC-213ENST00000529828 H0Y8G0 127 aa2.71□□□□□ -1.97
PTPRC-213ENST00000529828 SLC33A1O00400 549 aaPredicted RBP2.71□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms