RNA–Protein interactions for RNA: ENST00000529472.1

CHD7-209, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 3

Gene CHD7, Length 788 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-209ENST00000529472 MIXL1Q9H2W2 232 aa9.33□□□□□ -0.92
CHD7-209ENST00000529472 UNKLQ9H9P5 680 aaKnown RBP9.33□□□□□ -0.92
CHD7-209ENST00000529472 TAF9BQ9HBM6 251 aa9.33□□□□□ -0.92
CHD7-209ENST00000529472 MBNL3Q9NUK0 354 aaKnown RBP9.33□□□□□ -0.92
CHD7-209ENST00000529472 IDI2-AS1Q9NZ38 188 aa9.33□□□□□ -0.92
CHD7-209ENST00000529472 KCNIP1Q9NZI2 227 aa9.33□□□□□ -0.92
CHD7-209ENST00000529472 NUP50Q9UKX7 468 aa9.33□□□□□ -0.92
CHD7-209ENST00000529472 SETD2Q9BYW2 2564 aaPredicted RBP9.32□□□□□ -0.92
CHD7-209ENST00000529472 A6NHS1 94 aa9.32□□□□□ -0.92
CHD7-209ENST00000529472 NPIPB11E5RHQ5 1161 aa9.32□□□□□ -0.92
CHD7-209ENST00000529472 C15orf65H3BRN8 121 aa9.32□□□□□ -0.92
CHD7-209ENST00000529472 SDCBPO00560 298 aaPredicted RBP9.32□□□□□ -0.92
CHD7-209ENST00000529472 SPINT2O43291 252 aa9.32□□□□□ -0.92
CHD7-209ENST00000529472 ORC5O43913 435 aa9.32□□□□□ -0.92
CHD7-209ENST00000529472 IGHV3-7P01780 117 aa9.32□□□□□ -0.92
CHD7-209ENST00000529472 HBZP02008 142 aa9.32□□□□□ -0.92
CHD7-209ENST00000529472 MNDAP41218 407 aa9.32□□□□□ -0.92
CHD7-209ENST00000529472 HCP5Q6MZN7 132 aa9.32□□□□□ -0.92
CHD7-209ENST00000529472 ZNF880Q6PDB4 577 aa9.32□□□□□ -0.92
CHD7-209ENST00000529472 OR13D1Q8NGV5 346 aa9.32□□□□□ -0.92
CHD7-209ENST00000529472 C22orf15Q8WYQ4 148 aa9.32□□□□□ -0.92
CHD7-209ENST00000529472 GCDHQ92947 438 aaPredicted RBP9.32□□□□□ -0.92
CHD7-209ENST00000529472 LEAP2Q969E1 77 aa9.32□□□□□ -0.92
CHD7-209ENST00000529472 TMEM133Q9H2Q1 129 aa9.32□□□□□ -0.92
CHD7-209ENST00000529472 AUNIPQ9H7T9 357 aa9.32□□□□□ -0.92
CHD7-209ENST00000529472 HEXA-AS1Q9H8Q6 139 aa9.32□□□□□ -0.92
CHD7-209ENST00000529472 LINC00574Q9H8X3 128 aa9.32□□□□□ -0.92
CHD7-209ENST00000529472 Q9N2K0 584 aa9.32□□□□□ -0.92
CHD7-209ENST00000529472 RAB9BQ9NP90 201 aa9.32□□□□□ -0.92
CHD7-209ENST00000529472 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.32□□□□□ -0.92
CHD7-209ENST00000529472 EXTL2Q9UBQ6 330 aa9.32□□□□□ -0.92
CHD7-209ENST00000529472 ZNF69Q9UC07 566 aa9.32□□□□□ -0.92
CHD7-209ENST00000529472 ZNF230Q9UIE0 474 aaPredicted RBP9.32□□□□□ -0.92
CHD7-209ENST00000529472 ADAM30Q9UKF2 790 aa9.32□□□□□ -0.92
CHD7-209ENST00000529472 MRPS7Q9Y2R9 242 aaKnown RBP9.32□□□□□ -0.92
CHD7-209ENST00000529472 NAV3Q8IVL0 2385 aa9.32□□□□□ -0.92
CHD7-209ENST00000529472 TRBV6-6A0A0A6YYG2 114 aa9.31□□□□□ -0.92
CHD7-209ENST00000529472 IGHV2-26A0A0B4J1V2 119 aa9.31□□□□□ -0.92
CHD7-209ENST00000529472 IGHV3-43A0A0B4J1X8 118 aa9.31□□□□□ -0.92
CHD7-209ENST00000529472 SSX5O60225 188 aa9.31□□□□□ -0.92
CHD7-209ENST00000529472 CRLF1O75462 422 aa9.31□□□□□ -0.92
CHD7-209ENST00000529472 ARG1P05089 322 aa9.31□□□□□ -0.92
CHD7-209ENST00000529472 IGHV3-43DP0DP04 118 aa9.31□□□□□ -0.92
CHD7-209ENST00000529472 EPHA1P21709 976 aa9.31□□□□□ -0.92
CHD7-209ENST00000529472 FPR2P25090 351 aa9.31□□□□□ -0.92
CHD7-209ENST00000529472 UBE2E1P51965 193 aa9.31□□□□□ -0.92
CHD7-209ENST00000529472 HLA-DRB3P79483 266 aa9.31□□□□□ -0.92
CHD7-209ENST00000529472 GUCA2AQ02747 115 aa9.31□□□□□ -0.92
CHD7-209ENST00000529472 HMGN3Q15651 99 aa9.31□□□□□ -0.92
CHD7-209ENST00000529472 PNLIPRP3Q17RR3 467 aa9.31□□□□□ -0.92
CHD7-209ENST00000529472 UTF1Q5T230 341 aa9.31□□□□□ -0.92
CHD7-209ENST00000529472 OR52W1Q6IF63 320 aa9.31□□□□□ -0.92
CHD7-209ENST00000529472 FAM53AQ6NSI3 398 aaPredicted RBP9.31□□□□□ -0.92
CHD7-209ENST00000529472 CNIH2Q6PI25 160 aa9.31□□□□□ -0.92
CHD7-209ENST00000529472 SNX29P2Q8IUI4 249 aa9.31□□□□□ -0.92
CHD7-209ENST00000529472 OR10V1Q8NGI7 309 aa9.31□□□□□ -0.92
CHD7-209ENST00000529472 IL1F10Q8WWZ1 152 aa9.31□□□□□ -0.92
CHD7-209ENST00000529472 MS4A7Q9GZW8 240 aaPredicted RBP9.31□□□□□ -0.92
CHD7-209ENST00000529472 NXF2Q9GZY0 626 aaKnown RBP9.31□□□□□ -0.92
CHD7-209ENST00000529472 ZNF286AQ9HBT8 521 aa9.31□□□□□ -0.92
CHD7-209ENST00000529472 SOX21Q9Y651 276 aaPredicted RBP9.31□□□□□ -0.92
CHD7-209ENST00000529472 MEIOCA2RUB1 952 aa9.3□□□□□ -0.92
CHD7-209ENST00000529472 MEIS3P1A6NDR6 274 aa9.3□□□□□ -0.92
CHD7-209ENST00000529472 F2RL2O00254 374 aa9.3□□□□□ -0.92
CHD7-209ENST00000529472 NPFFO15130 113 aa9.3□□□□□ -0.92
CHD7-209ENST00000529472 FCER2P06734 321 aa9.3□□□□□ -0.92
CHD7-209ENST00000529472 MELTFP08582 738 aa9.3□□□□□ -0.92
CHD7-209ENST00000529472 DTYMKP23919 212 aa9.3□□□□□ -0.92
CHD7-209ENST00000529472 SAA4P35542 130 aa9.3□□□□□ -0.92
CHD7-209ENST00000529472 GNG10P50151 68 aa9.3□□□□□ -0.92
CHD7-209ENST00000529472 PITPNAQ00169 270 aa9.3□□□□□ -0.92
CHD7-209ENST00000529472 GNMTQ14749 295 aa9.3□□□□□ -0.92
CHD7-209ENST00000529472 ZNF554Q86TJ5 538 aa9.3□□□□□ -0.92
CHD7-209ENST00000529472 BCL6BQ8N143 479 aaPredicted RBP9.3□□□□□ -0.92
CHD7-209ENST00000529472 ABHD12Q8N2K0 398 aa9.3□□□□□ -0.92
CHD7-209ENST00000529472 OR10A7Q8NGE5 316 aa9.3□□□□□ -0.92
CHD7-209ENST00000529472 ST6GALNAC5Q9BVH7 336 aa9.3□□□□□ -0.92
CHD7-209ENST00000529472 CLEC7AQ9BXN2 247 aa9.3□□□□□ -0.92
CHD7-209ENST00000529472 MMP27Q9H306 513 aa9.3□□□□□ -0.92
CHD7-209ENST00000529472 GFOD1Q9NXC2 390 aa9.3□□□□□ -0.92
CHD7-209ENST00000529472 ZNRD1Q9P1U0 126 aa9.3□□□□□ -0.92
CHD7-209ENST00000529472 GNG12Q9UBI6 72 aa9.3□□□□□ -0.92
CHD7-209ENST00000529472 MGAT4AQ9UM21 535 aa9.3□□□□□ -0.92
CHD7-209ENST00000529472 ODF3BA8MYP8 253 aa9.29□□□□□ -0.92
CHD7-209ENST00000529472 TRDCB7Z8K6 153 aa9.29□□□□□ -0.92
CHD7-209ENST00000529472 TOR1AO14656 332 aa9.29□□□□□ -0.92
CHD7-209ENST00000529472 HLA-DQB1P01920 261 aa9.29□□□□□ -0.92
CHD7-209ENST00000529472 SCTP09683 121 aa9.29□□□□□ -0.92
CHD7-209ENST00000529472 FAM157CP0CG43 387 aa9.29□□□□□ -0.92
CHD7-209ENST00000529472 PPP1CCP36873 323 aaKnown RBP9.29□□□□□ -0.92
CHD7-209ENST00000529472 LGALS4P56470 323 aa9.29□□□□□ -0.92
CHD7-209ENST00000529472 LOXL3P58215 753 aa9.29□□□□□ -0.92
CHD7-209ENST00000529472 SCGB2A2Q13296 93 aa9.29□□□□□ -0.92
CHD7-209ENST00000529472 RNASE12Q5GAN4 147 aaKnown RBP9.29□□□□□ -0.92
CHD7-209ENST00000529472 GVQW1Q8N7I0 195 aa9.29□□□□□ -0.92
CHD7-209ENST00000529472 OR11H6Q8NGC7 330 aa9.29□□□□□ -0.92
CHD7-209ENST00000529472 OR52L2PQ8NGH6 319 aa9.29□□□□□ -0.92
CHD7-209ENST00000529472 GALMQ96C23 342 aa9.29□□□□□ -0.92
CHD7-209ENST00000529472 DIRAS2Q96HU8 199 aa9.29□□□□□ -0.92
CHD7-209ENST00000529472 SLC6A7Q99884 636 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms