RNA–Protein interactions for RNA: ENST00000528965.1

CTSB-215, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-215ENST00000528965 OR8H1Q8NGG4 311 aa12.32□□□□□ -0.44
CTSB-215ENST00000528965 EAF1Q96JC9 268 aaPredicted RBP12.32□□□□□ -0.44
CTSB-215ENST00000528965 RASL11BQ9BPW5 248 aa12.32□□□□□ -0.44
CTSB-215ENST00000528965 ABCG5Q9H222 651 aa12.32□□□□□ -0.44
CTSB-215ENST00000528965 SPACA1Q9HBV2 294 aa12.32□□□□□ -0.44
CTSB-215ENST00000528965 GFOD1Q9NXC2 390 aa12.32□□□□□ -0.44
CTSB-215ENST00000528965 IGHV3-72A0A0B4J1Y9 119 aa12.31□□□□□ -0.44
CTSB-215ENST00000528965 TRAV39A0A0B4J263 110 aa12.31□□□□□ -0.44
CTSB-215ENST00000528965 AIPO00170 330 aa12.31□□□□□ -0.44
CTSB-215ENST00000528965 CCL24O00175 119 aa12.31□□□□□ -0.44
CTSB-215ENST00000528965 MYL12BO14950 172 aa12.31□□□□□ -0.44
CTSB-215ENST00000528965 MOSP00540 346 aa12.31□□□□□ -0.44
CTSB-215ENST00000528965 GTF2F2P13984 249 aa12.31□□□□□ -0.44
CTSB-215ENST00000528965 SERPINA2P20848 420 aa12.31□□□□□ -0.44
CTSB-215ENST00000528965 CD1BP29016 333 aa12.31□□□□□ -0.44
CTSB-215ENST00000528965 BDKRB2P30411 391 aa12.31□□□□□ -0.44
CTSB-215ENST00000528965 FOXE3Q13461 319 aa12.31□□□□□ -0.44
CTSB-215ENST00000528965 RIPK1Q13546 671 aa12.31□□□□□ -0.44
CTSB-215ENST00000528965 GPR176Q14439 515 aa12.31□□□□□ -0.44
CTSB-215ENST00000528965 OR5M8Q8NGP6 311 aa12.31□□□□□ -0.44
CTSB-215ENST00000528965 RGP1Q92546 391 aaPredicted RBP12.31□□□□□ -0.44
CTSB-215ENST00000528965 GGHQ92820 318 aa12.31□□□□□ -0.44
CTSB-215ENST00000528965 VCX3BQ9H321 246 aa12.31□□□□□ -0.44
CTSB-215ENST00000528965 CKLFQ9UBR5 152 aa12.31□□□□□ -0.44
CTSB-215ENST00000528965 SIRT4Q9Y6E7 314 aaPredicted RBP12.31□□□□□ -0.44
CTSB-215ENST00000528965 GEMIN2O14893 280 aaKnown RBP12.3□□□□□ -0.44
CTSB-215ENST00000528965 CASQ2O14958 399 aaPredicted RBP12.3□□□□□ -0.44
CTSB-215ENST00000528965 SPINT2O43291 252 aa12.3□□□□□ -0.44
CTSB-215ENST00000528965 ELANEP08246 267 aa12.3□□□□□ -0.44
CTSB-215ENST00000528965 VDAC1P21796 283 aa12.3□□□□□ -0.44
CTSB-215ENST00000528965 GPR50Q13585 617 aa12.3□□□□□ -0.44
CTSB-215ENST00000528965 C6orf183Q5T699 404 aa12.3□□□□□ -0.44
CTSB-215ENST00000528965 Q8N6K4 173 aa12.3□□□□□ -0.44
CTSB-215ENST00000528965 RTN4IP1Q8WWV3 396 aaPredicted RBP12.3□□□□□ -0.44
CTSB-215ENST00000528965 RAX2Q96IS3 184 aa12.3□□□□□ -0.44
CTSB-215ENST00000528965 SCN3BQ9NY72 215 aa12.3□□□□□ -0.44
CTSB-215ENST00000528965 ERGIC3Q9Y282 383 aa12.3□□□□□ -0.44
CTSB-215ENST00000528965 C15orf65H3BRN8 121 aa12.29□□□□□ -0.44
CTSB-215ENST00000528965 RPLP1P05386 114 aaKnown RBP12.29□□□□□ -0.44
CTSB-215ENST00000528965 NHLRC4P0CG21 123 aaPredicted RBP12.29□□□□□ -0.44
CTSB-215ENST00000528965 OR5H8P0DN80 308 aa12.29□□□□□ -0.44
CTSB-215ENST00000528965 TAS2R43P59537 309 aa12.29□□□□□ -0.44
CTSB-215ENST00000528965 SLC22A6Q4U2R8 563 aa12.29□□□□□ -0.44
CTSB-215ENST00000528965 C9orf66Q5T8R8 295 aa12.29□□□□□ -0.44
CTSB-215ENST00000528965 TRAT1Q6PIZ9 186 aa12.29□□□□□ -0.44
CTSB-215ENST00000528965 ZNF497Q6ZNH5 498 aa12.29□□□□□ -0.44
CTSB-215ENST00000528965 AHSA2Q719I0 299 aa12.29□□□□□ -0.44
CTSB-215ENST00000528965 Q8N9W7 124 aa12.29□□□□□ -0.44
CTSB-215ENST00000528965 CCDC107Q8WV48 283 aa12.29□□□□□ -0.44
CTSB-215ENST00000528965 SMIM19Q96E16 107 aa12.29□□□□□ -0.44
CTSB-215ENST00000528965 DUX3Q96PT4 197 aa12.29□□□□□ -0.44
CTSB-215ENST00000528965 CNOT2Q9NZN8 540 aaKnown RBP12.29□□□□□ -0.44
CTSB-215ENST00000528965 GNG12Q9UBI6 72 aa12.29□□□□□ -0.44
CTSB-215ENST00000528965 NBEAL2Q6ZNJ1 2754 aa12.29□□□□□ -0.44
CTSB-215ENST00000528965 IGHV3-43A0A0B4J1X8 118 aa12.28□□□□□ -0.44
CTSB-215ENST00000528965 MCRIP1C9JLW8 97 aa12.28□□□□□ -0.44
CTSB-215ENST00000528965 PTGES3LE9PB15 166 aa12.28□□□□□ -0.44
CTSB-215ENST00000528965 GNAO1P09471 354 aa12.28□□□□□ -0.44
CTSB-215ENST00000528965 IGHV3-43DP0DP04 118 aa12.28□□□□□ -0.44
CTSB-215ENST00000528965 SOX6P35712 828 aa12.28□□□□□ -0.44
CTSB-215ENST00000528965 CDX1P47902 265 aaPredicted RBP12.28□□□□□ -0.44
CTSB-215ENST00000528965 KIR2DS1Q14954 304 aa12.28□□□□□ -0.44
CTSB-215ENST00000528965 RNF152Q8N8N0 203 aa12.28□□□□□ -0.44
CTSB-215ENST00000528965 TFAP2CQ92754 450 aa12.28□□□□□ -0.44
CTSB-215ENST00000528965 S1PR3Q99500 378 aa12.28□□□□□ -0.44
CTSB-215ENST00000528965 ZNF184Q99676 751 aaPredicted RBP12.28□□□□□ -0.44
CTSB-215ENST00000528965 ZNF581Q9P0T4 197 aa12.28□□□□□ -0.44
CTSB-215ENST00000528965 CLEC2DQ9UHP7 191 aa12.28□□□□□ -0.44
CTSB-215ENST00000528965 ZNF580Q9UK33 172 aa12.28□□□□□ -0.44
CTSB-215ENST00000528965 TRAPPC2LQ9UL33 140 aa12.28□□□□□ -0.44
CTSB-215ENST00000528965 TENM3Q9P273 2699 aa12.27□□□□□ -0.44
CTSB-215ENST00000528965 PNMA8CA0A1B0GUJ8 204 aa12.27□□□□□ -0.45
CTSB-215ENST00000528965 OGG1O15527 345 aa12.27□□□□□ -0.45
CTSB-215ENST00000528965 MT-ND4P03905 459 aa12.27□□□□□ -0.45
CTSB-215ENST00000528965 ZNF137PP52743 207 aa12.27□□□□□ -0.45
CTSB-215ENST00000528965 XAF1Q6GPH4 301 aa12.27□□□□□ -0.45
CTSB-215ENST00000528965 LCNL1Q6ZST4 164 aa12.27□□□□□ -0.45
CTSB-215ENST00000528965 SLC25A48Q6ZT89 311 aaKnown RBP12.27□□□□□ -0.45
CTSB-215ENST00000528965 ZFP41Q8N8Y5 198 aa12.27□□□□□ -0.45
CTSB-215ENST00000528965 TMEM104Q8NE00 496 aa12.27□□□□□ -0.45
CTSB-215ENST00000528965 UBALD1Q8TB05 177 aa12.27□□□□□ -0.45
CTSB-215ENST00000528965 C4orf3Q8WVX3 66 aa12.27□□□□□ -0.45
CTSB-215ENST00000528965 GHSRQ92847 366 aa12.27□□□□□ -0.45
CTSB-215ENST00000528965 ST6GALNAC6Q969X2 333 aa12.27□□□□□ -0.45
CTSB-215ENST00000528965 MRPS24Q96EL2 167 aaKnown RBP12.27□□□□□ -0.45
CTSB-215ENST00000528965 ETAA1Q9NY74 926 aa12.27□□□□□ -0.45
CTSB-215ENST00000528965 RCC2Q9P258 522 aaKnown RBP12.27□□□□□ -0.45
CTSB-215ENST00000528965 NKX1-2Q9UD57 310 aaPredicted RBP12.27□□□□□ -0.45
CTSB-215ENST00000528965 LINC01548A6NM66 108 aa12.26□□□□□ -0.45
CTSB-215ENST00000528965 CA11O75493 328 aa12.26□□□□□ -0.45
CTSB-215ENST00000528965 IGHG4P01861 327 aa12.26□□□□□ -0.45
CTSB-215ENST00000528965 FSTP19883 344 aa12.26□□□□□ -0.45
CTSB-215ENST00000528965 LUMP51884 338 aaPredicted RBP12.26□□□□□ -0.45
CTSB-215ENST00000528965 DEFB136Q30KP8 78 aa12.26□□□□□ -0.45
CTSB-215ENST00000528965 Q499Y3 187 aa12.26□□□□□ -0.45
CTSB-215ENST00000528965 YIF1BQ5BJH7 314 aa12.26□□□□□ -0.45
CTSB-215ENST00000528965 FAM71E2Q8N5Q1 922 aa12.26□□□□□ -0.45
CTSB-215ENST00000528965 CHCHD6Q9BRQ6 235 aa12.26□□□□□ -0.45
CTSB-215ENST00000528965 PLCXD1Q9NUJ7 323 aa12.26□□□□□ -0.45
CTSB-215ENST00000528965 PSORS1C1Q9UIG5 152 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms