RNA–Protein interactions for RNA: ENST00000528768.5

USF1-208, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 505 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-208ENST00000528768 SPIN3Q5JUX0 258 aa9.97□□□□□ -0.81
USF1-208ENST00000528768 SPATA46Q5T0L3 261 aa9.97□□□□□ -0.81
USF1-208ENST00000528768 Q71RC1 249 aaPredicted RBP9.97□□□□□ -0.81
USF1-208ENST00000528768 FAM71E2Q8N5Q1 922 aa9.97□□□□□ -0.81
USF1-208ENST00000528768 C9orf106Q8NAJ2 232 aa9.97□□□□□ -0.81
USF1-208ENST00000528768 SLC25A40Q8TBP6 338 aa9.97□□□□□ -0.81
USF1-208ENST00000528768 RNF141Q8WVD5 230 aa9.97□□□□□ -0.81
USF1-208ENST00000528768 OR10C1Q96KK4 312 aa9.97□□□□□ -0.81
USF1-208ENST00000528768 SLC5A7Q9GZV3 580 aa9.97□□□□□ -0.81
USF1-208ENST00000528768 FGF23Q9GZV9 251 aaPredicted RBP9.97□□□□□ -0.81
USF1-208ENST00000528768 NSG2Q9Y328 171 aa9.97□□□□□ -0.81
USF1-208ENST00000528768 SPEF1Q9Y4P9 236 aa9.97□□□□□ -0.81
USF1-208ENST00000528768 MXRA5Q9NR99 2828 aa9.97□□□□□ -0.81
USF1-208ENST00000528768 C3orf85A0A1B0GTC6 90 aa9.96□□□□□ -0.82
USF1-208ENST00000528768 MBD3L4A6NDZ8 208 aaPredicted RBP9.96□□□□□ -0.82
USF1-208ENST00000528768 MBD3L3A6NE82 208 aaPredicted RBP9.96□□□□□ -0.82
USF1-208ENST00000528768 MBD3L5A6NJ08 208 aaPredicted RBP9.96□□□□□ -0.82
USF1-208ENST00000528768 TEX46H3BTG2 121 aa9.96□□□□□ -0.82
USF1-208ENST00000528768 BET1O15155 118 aa9.96□□□□□ -0.82
USF1-208ENST00000528768 MPPED1O15442 326 aa9.96□□□□□ -0.82
USF1-208ENST00000528768 NXPH2O95156 264 aa9.96□□□□□ -0.82
USF1-208ENST00000528768 PVALBP20472 110 aaPredicted RBP9.96□□□□□ -0.82
USF1-208ENST00000528768 ZP3P21754 424 aa9.96□□□□□ -0.82
USF1-208ENST00000528768 HLA-DRB3P79483 266 aa9.96□□□□□ -0.82
USF1-208ENST00000528768 FAM76BQ5HYJ3 339 aa9.96□□□□□ -0.82
USF1-208ENST00000528768 GPR157Q5UAW9 335 aa9.96□□□□□ -0.82
USF1-208ENST00000528768 BHLHA15Q7RTS1 189 aaPredicted RBP9.96□□□□□ -0.82
USF1-208ENST00000528768 ZNF695Q8IW36 515 aa9.96□□□□□ -0.82
USF1-208ENST00000528768 WFDC11Q8NEX6 87 aa9.96□□□□□ -0.82
USF1-208ENST00000528768 OR1S1Q8NH92 325 aa9.96□□□□□ -0.82
USF1-208ENST00000528768 OR10J5Q8NHC4 309 aa9.96□□□□□ -0.82
USF1-208ENST00000528768 MBD3L2Q8NHZ7 208 aaPredicted RBP9.96□□□□□ -0.82
USF1-208ENST00000528768 PCNPQ8WW12 178 aaKnown RBP9.96□□□□□ -0.82
USF1-208ENST00000528768 MARS2Q96GW9 593 aaKnown RBP9.96□□□□□ -0.82
USF1-208ENST00000528768 ABHD14BQ96IU4 210 aa9.96□□□□□ -0.82
USF1-208ENST00000528768 SMR3AQ99954 134 aa9.96□□□□□ -0.82
USF1-208ENST00000528768 OR2J1Q9GZK6 312 aa9.96□□□□□ -0.82
USF1-208ENST00000528768 ZNF581Q9P0T4 197 aa9.96□□□□□ -0.82
USF1-208ENST00000528768 ZNF629Q9UEG4 869 aaPredicted RBP9.96□□□□□ -0.82
USF1-208ENST00000528768 HIVEP2P31629 2446 aa9.96□□□□□ -0.82
USF1-208ENST00000528768 BORCS7-ASMTA0A0B4J1R7 106 aa9.95□□□□□ -0.82
USF1-208ENST00000528768 HS3ST1O14792 307 aa9.95□□□□□ -0.82
USF1-208ENST00000528768 MSTNO14793 375 aa9.95□□□□□ -0.82
USF1-208ENST00000528768 ST8SIA3O43173 380 aa9.95□□□□□ -0.82
USF1-208ENST00000528768 DEDDO75618 318 aa9.95□□□□□ -0.82
USF1-208ENST00000528768 JTBO76095 146 aa9.95□□□□□ -0.82
USF1-208ENST00000528768 GOSR1O95249 250 aa9.95□□□□□ -0.82
USF1-208ENST00000528768 CDS2O95674 445 aa9.95□□□□□ -0.82
USF1-208ENST00000528768 IGKV3-15P01624 115 aa9.95□□□□□ -0.82
USF1-208ENST00000528768 RPL12P30050 165 aaKnown RBP9.95□□□□□ -0.82
USF1-208ENST00000528768 GNMTQ14749 295 aa9.95□□□□□ -0.82
USF1-208ENST00000528768 UQCC3Q6UW78 93 aa9.95□□□□□ -0.82
USF1-208ENST00000528768 BATF2Q8N1L9 274 aa9.95□□□□□ -0.82
USF1-208ENST00000528768 SCCPDHQ8NBX0 429 aa9.95□□□□□ -0.82
USF1-208ENST00000528768 OR8G5Q8NG78 346 aa9.95□□□□□ -0.82
USF1-208ENST00000528768 SECTM1Q8WVN6 248 aa9.95□□□□□ -0.82
USF1-208ENST00000528768 RDH5Q92781 318 aa9.95□□□□□ -0.82
USF1-208ENST00000528768 IL22RA2Q969J5 263 aa9.95□□□□□ -0.82
USF1-208ENST00000528768 MRPL24Q96A35 216 aaKnown RBP9.95□□□□□ -0.82
USF1-208ENST00000528768 LRRC46Q96FV0 321 aa9.95□□□□□ -0.82
USF1-208ENST00000528768 CXorf58Q96LI9 332 aa9.95□□□□□ -0.82
USF1-208ENST00000528768 PIGMQ9H3S5 423 aa9.95□□□□□ -0.82
USF1-208ENST00000528768 LIME1Q9H400 295 aa9.95□□□□□ -0.82
USF1-208ENST00000528768 TAS2R3Q9NYW6 316 aa9.95□□□□□ -0.82
USF1-208ENST00000528768 PRR13Q9NZ81 148 aa9.95□□□□□ -0.82
USF1-208ENST00000528768 KCNIP1Q9NZI2 227 aa9.95□□□□□ -0.82
USF1-208ENST00000528768 OR5AC2Q9NZP5 309 aa9.95□□□□□ -0.82
USF1-208ENST00000528768 CRIM1Q9NZV1 1036 aa9.95□□□□□ -0.82
USF1-208ENST00000528768 PURGQ9UJV8 347 aaKnown RBP9.95□□□□□ -0.82
USF1-208ENST00000528768 LSM5Q9Y4Y9 91 aaKnown RBP9.95□□□□□ -0.82
USF1-208ENST00000528768 ARHGAP21Q5T5U3 1957 aa9.95□□□□□ -0.82
USF1-208ENST00000528768 FBN1P35555 2871 aaKnown RBP9.94□□□□□ -0.82
USF1-208ENST00000528768 A6NNC1 897 aa9.94□□□□□ -0.82
USF1-208ENST00000528768 H0YIZ8 118 aa9.94□□□□□ -0.82
USF1-208ENST00000528768 TIMM8AO60220 97 aaPredicted RBP9.94□□□□□ -0.82
USF1-208ENST00000528768 GPR137BO60478 399 aa9.94□□□□□ -0.82
USF1-208ENST00000528768 TUSC2O75896 110 aa9.94□□□□□ -0.82
USF1-208ENST00000528768 CRYZL1O95825 349 aa9.94□□□□□ -0.82
USF1-208ENST00000528768 SCGB1D2O95969 90 aa9.94□□□□□ -0.82
USF1-208ENST00000528768 GAPDHP04406 335 aaKnown RBP9.94□□□□□ -0.82
USF1-208ENST00000528768 CELA3BP08861 270 aa9.94□□□□□ -0.82
USF1-208ENST00000528768 FGF2P09038 288 aa9.94□□□□□ -0.82
USF1-208ENST00000528768 PGA5P0DJD9 388 aa9.94□□□□□ -0.82
USF1-208ENST00000528768 M6PRP20645 277 aa9.94□□□□□ -0.82
USF1-208ENST00000528768 KITLGP21583 273 aa9.94□□□□□ -0.82
USF1-208ENST00000528768 KCNJ3P48549 501 aa9.94□□□□□ -0.82
USF1-208ENST00000528768 C3orf36Q3SXR2 165 aa9.94□□□□□ -0.82
USF1-208ENST00000528768 IGSF11Q5DX21 431 aa9.94□□□□□ -0.82
USF1-208ENST00000528768 C1orf185Q5T7R7 199 aa9.94□□□□□ -0.82
USF1-208ENST00000528768 VWA1Q6PCB0 445 aa9.94□□□□□ -0.82
USF1-208ENST00000528768 ZNF880Q6PDB4 577 aa9.94□□□□□ -0.82
USF1-208ENST00000528768 FOXRED2Q8IWF2 684 aa9.94□□□□□ -0.82
USF1-208ENST00000528768 WDR31Q8NA23 367 aa9.94□□□□□ -0.82
USF1-208ENST00000528768 BVESQ8NE79 360 aa9.94□□□□□ -0.82
USF1-208ENST00000528768 LILRB1Q8NHL6 650 aaPredicted RBP9.94□□□□□ -0.82
USF1-208ENST00000528768 MRPL30Q8TCC3 161 aaKnown RBP9.94□□□□□ -0.82
USF1-208ENST00000528768 KLF14Q8TD94 323 aaPredicted RBP9.94□□□□□ -0.82
USF1-208ENST00000528768 FAM222BQ8WU58 562 aa9.94□□□□□ -0.82
USF1-208ENST00000528768 AKR1E2Q96JD6 320 aa9.94□□□□□ -0.82
USF1-208ENST00000528768 NRIP2Q9BQI9 281 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms