RNA–Protein interactions for RNA: ENST00000528216.5

PGAP2-231, Transcript of post-GPI attachment to proteins 2, humanhuman

TSL 1 (best)

Gene PGAP2, Length 1,815 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP2-231ENST00000528216 VAMP2P63027 116 aa8.66□□□□□ -1.02
PGAP2-231ENST00000528216 ID3Q02535 119 aa8.66□□□□□ -1.02
PGAP2-231ENST00000528216 ZNF154Q13106 437 aa8.66□□□□□ -1.02
PGAP2-231ENST00000528216 PXDC1Q5TGL8 231 aa8.66□□□□□ -1.02
PGAP2-231ENST00000528216 LFNGQ8NES3 379 aa8.66□□□□□ -1.02
PGAP2-231ENST00000528216 DMBX1Q8NFW5 382 aa8.66□□□□□ -1.02
PGAP2-231ENST00000528216 NARS2Q96I59 477 aaKnown RBP8.66□□□□□ -1.02
PGAP2-231ENST00000528216 USB1Q9BQ65 265 aaKnown RBP8.66□□□□□ -1.02
PGAP2-231ENST00000528216 SMDT1Q9H4I9 107 aa8.66□□□□□ -1.02
PGAP2-231ENST00000528216 ZNF71Q9NQZ8 489 aaPredicted RBP8.66□□□□□ -1.02
PGAP2-231ENST00000528216 IL36RNQ9UBH0 155 aa8.66□□□□□ -1.02
PGAP2-231ENST00000528216 TRAPPC2LQ9UL33 140 aa8.66□□□□□ -1.02
PGAP2-231ENST00000528216 RCL1Q9Y2P8 373 aaKnown RBP8.66□□□□□ -1.02
PGAP2-231ENST00000528216 CACNA1GO43497 2377 aa8.65□□□□□ -1.02
PGAP2-231ENST00000528216 ZFHX4Q86UP3 3567 aa8.65□□□□□ -1.02
PGAP2-231ENST00000528216 CACNA1BQ00975 2339 aa8.65□□□□□ -1.02
PGAP2-231ENST00000528216 LAMA5O15230 3695 aa8.65□□□□□ -1.02
PGAP2-231ENST00000528216 NKX2-6A6NCS4 301 aa8.65□□□□□ -1.02
PGAP2-231ENST00000528216 K7ENP7 123 aa8.65□□□□□ -1.02
PGAP2-231ENST00000528216 KCNAB3O43448 404 aa8.65□□□□□ -1.02
PGAP2-231ENST00000528216 RHBDL1O75783 438 aa8.65□□□□□ -1.02
PGAP2-231ENST00000528216 SERPINE2P07093 398 aa8.65□□□□□ -1.02
PGAP2-231ENST00000528216 CELA3BP08861 270 aa8.65□□□□□ -1.02
PGAP2-231ENST00000528216 SPP1P10451 314 aa8.65□□□□□ -1.02
PGAP2-231ENST00000528216 MST1LQ2TV78 715 aa8.65□□□□□ -1.02
PGAP2-231ENST00000528216 SMIM21Q3B7S5 101 aa8.65□□□□□ -1.02
PGAP2-231ENST00000528216 SPATA46Q5T0L3 261 aa8.65□□□□□ -1.02
PGAP2-231ENST00000528216 BTNL8Q6UX41 500 aa8.65□□□□□ -1.02
PGAP2-231ENST00000528216 Q6ZS92 163 aa8.65□□□□□ -1.02
PGAP2-231ENST00000528216 BHLHA15Q7RTS1 189 aaPredicted RBP8.65□□□□□ -1.02
PGAP2-231ENST00000528216 SSX8Q7RTT4 187 aa8.65□□□□□ -1.02
PGAP2-231ENST00000528216 WDR86Q86TI4 376 aa8.65□□□□□ -1.02
PGAP2-231ENST00000528216 GCNT2Q8N0V5 402 aa8.65□□□□□ -1.02
PGAP2-231ENST00000528216 OR52M1Q8NGK5 317 aa8.65□□□□□ -1.02
PGAP2-231ENST00000528216 OR10Z1Q8NGY1 313 aa8.65□□□□□ -1.02
PGAP2-231ENST00000528216 LRRC46Q96FV0 321 aa8.65□□□□□ -1.02
PGAP2-231ENST00000528216 RAB40CQ96S21 281 aa8.65□□□□□ -1.02
PGAP2-231ENST00000528216 TSNAXQ99598 290 aaKnown RBP8.65□□□□□ -1.02
PGAP2-231ENST00000528216 CCL28Q9NRJ3 127 aa8.65□□□□□ -1.02
PGAP2-231ENST00000528216 LYRM2Q9NU23 88 aaPredicted RBP8.65□□□□□ -1.02
PGAP2-231ENST00000528216 IGKV1D-13A0A0B4J2D9 117 aa8.64□□□□□ -1.03
PGAP2-231ENST00000528216 WRBO00258 174 aa8.64□□□□□ -1.03
PGAP2-231ENST00000528216 SCO1O75880 301 aa8.64□□□□□ -1.03
PGAP2-231ENST00000528216 TNFSF13O75888 250 aa8.64□□□□□ -1.03
PGAP2-231ENST00000528216 SNAPINO95295 136 aa8.64□□□□□ -1.03
PGAP2-231ENST00000528216 HAND1O96004 215 aa8.64□□□□□ -1.03
PGAP2-231ENST00000528216 CGAP01215 116 aa8.64□□□□□ -1.03
PGAP2-231ENST00000528216 HEXAP06865 529 aa8.64□□□□□ -1.03
PGAP2-231ENST00000528216 DANCRP0C864 163 aa8.64□□□□□ -1.03
PGAP2-231ENST00000528216 IGKV1-13P0DP09 117 aa8.64□□□□□ -1.03
PGAP2-231ENST00000528216 EWSR1Q01844 656 aaKnown RBP eCLIP8.64□□□□□ -1.03
PGAP2-231ENST00000528216 KRTCAP3Q53RY4 240 aa8.64□□□□□ -1.03
PGAP2-231ENST00000528216 GNPNAT1Q96EK6 184 aaPredicted RBP8.64□□□□□ -1.03
PGAP2-231ENST00000528216 ZNF488Q96MN9 340 aa8.64□□□□□ -1.03
PGAP2-231ENST00000528216 NKX6-2Q9C056 277 aaPredicted RBP8.64□□□□□ -1.03
PGAP2-231ENST00000528216 OR51B6Q9H340 312 aa8.64□□□□□ -1.03
PGAP2-231ENST00000528216 BTBD17A6NE02 478 aa8.64□□□□□ -1.03
PGAP2-231ENST00000528216 OOEPA6NGQ2 149 aa8.64□□□□□ -1.03
PGAP2-231ENST00000528216 FAM90A26D6RGX4 464 aa8.64□□□□□ -1.03
PGAP2-231ENST00000528216 HSPB6O14558 160 aa8.64□□□□□ -1.03
PGAP2-231ENST00000528216 HSD17B6O14756 317 aa8.64□□□□□ -1.03
PGAP2-231ENST00000528216 ADAM20O43506 726 aa8.64□□□□□ -1.03
PGAP2-231ENST00000528216 TIMM8AO60220 97 aaPredicted RBP8.64□□□□□ -1.03
PGAP2-231ENST00000528216 FBXO24O75426 580 aa8.64□□□□□ -1.03
PGAP2-231ENST00000528216 DFFBO76075 338 aa8.64□□□□□ -1.03
PGAP2-231ENST00000528216 ZNF205O95201 554 aa8.64□□□□□ -1.03
PGAP2-231ENST00000528216 PTBP3O95758 552 aaKnown RBP8.64□□□□□ -1.03
PGAP2-231ENST00000528216 CECR9P0C854 216 aa8.64□□□□□ -1.03
PGAP2-231ENST00000528216 RCC1P18754 421 aaPredicted RBP8.64□□□□□ -1.03
PGAP2-231ENST00000528216 TIMP3P35625 211 aa8.64□□□□□ -1.03
PGAP2-231ENST00000528216 CFHR2P36980 270 aa8.64□□□□□ -1.03
PGAP2-231ENST00000528216 DVL1P1P54792 670 aaPredicted RBP8.64□□□□□ -1.03
PGAP2-231ENST00000528216 DEFA5Q01523 94 aa8.64□□□□□ -1.03
PGAP2-231ENST00000528216 BTN1A1Q13410 526 aa8.64□□□□□ -1.03
PGAP2-231ENST00000528216 ZNF273Q14593 569 aa8.64□□□□□ -1.03
PGAP2-231ENST00000528216 TIMM23BQ5SRD1 257 aa8.64□□□□□ -1.03
PGAP2-231ENST00000528216 VWA1Q6PCB0 445 aa8.64□□□□□ -1.03
PGAP2-231ENST00000528216 C20orf204Q6ZNR8 217 aa8.64□□□□□ -1.03
PGAP2-231ENST00000528216 MYPOPQ86VE0 399 aaPredicted RBP8.64□□□□□ -1.03
PGAP2-231ENST00000528216 BATF2Q8N1L9 274 aa8.64□□□□□ -1.03
PGAP2-231ENST00000528216 STARD4Q96DR4 205 aa8.64□□□□□ -1.03
PGAP2-231ENST00000528216 UQCC1Q9NVA1 299 aa8.64□□□□□ -1.03
PGAP2-231ENST00000528216 COA4Q9NYJ1 87 aa8.64□□□□□ -1.03
PGAP2-231ENST00000528216 ERRFI1Q9UJM3 462 aaPredicted RBP8.64□□□□□ -1.03
PGAP2-231ENST00000528216 SHANK1Q9Y566 2161 aa8.63□□□□□ -1.03
PGAP2-231ENST00000528216 DOCK7Q96N67 2140 aa8.63□□□□□ -1.03
PGAP2-231ENST00000528216 IGHV2OR16-5A0A0B4J2B6 119 aa8.63□□□□□ -1.03
PGAP2-231ENST00000528216 A0A1B0GW64 132 aa8.63□□□□□ -1.03
PGAP2-231ENST00000528216 SIRPB1O00241 398 aa8.63□□□□□ -1.03
PGAP2-231ENST00000528216 CDIPTO14735 213 aa8.63□□□□□ -1.03
PGAP2-231ENST00000528216 SCAF4O95104 1147 aaKnown RBP8.63□□□□□ -1.03
PGAP2-231ENST00000528216 CD5P06127 495 aa8.63□□□□□ -1.03
PGAP2-231ENST00000528216 TAS2R30P59541 319 aa8.63□□□□□ -1.03
PGAP2-231ENST00000528216 RPS23P62266 143 aaKnown RBP8.63□□□□□ -1.03
PGAP2-231ENST00000528216 RPL23AP62750 156 aaKnown RBP8.63□□□□□ -1.03
PGAP2-231ENST00000528216 PEA15Q15121 130 aa8.63□□□□□ -1.03
PGAP2-231ENST00000528216 IGFBP7Q16270 282 aa8.63□□□□□ -1.03
PGAP2-231ENST00000528216 DPPA3Q6W0C5 159 aa8.63□□□□□ -1.03
PGAP2-231ENST00000528216 CXorf67Q86X51 503 aaPredicted RBP8.63□□□□□ -1.03
PGAP2-231ENST00000528216 FAM219AQ8IW50 185 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms