RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 SLC25A46Q96AG3 418 aa11.35□□□□□ -0.59
CAPN1-212ENST00000527887 S100A13Q99584 98 aa11.35□□□□□ -0.59
CAPN1-212ENST00000527887 CITED2Q99967 270 aaPredicted RBP11.35□□□□□ -0.59
CAPN1-212ENST00000527887 SLC25A33Q9BSK2 321 aa11.35□□□□□ -0.59
CAPN1-212ENST00000527887 PPIL3Q9H2H8 161 aaKnown RBP11.35□□□□□ -0.59
CAPN1-212ENST00000527887 CALYQ9NYX4 217 aa11.35□□□□□ -0.59
CAPN1-212ENST00000527887 IDI2-AS1Q9NZ38 188 aa11.35□□□□□ -0.59
CAPN1-212ENST00000527887 DSCAML1Q8TD84 2053 aa11.34□□□□□ -0.59
CAPN1-212ENST00000527887 FAM90A18PA6NE21 464 aa11.34□□□□□ -0.59
CAPN1-212ENST00000527887 FAM90A16PA6NEW6 464 aa11.34□□□□□ -0.59
CAPN1-212ENST00000527887 FAM90A20PA6NIJ5 464 aa11.34□□□□□ -0.59
CAPN1-212ENST00000527887 FAM90A9PA6NNJ1 464 aa11.34□□□□□ -0.59
CAPN1-212ENST00000527887 FAM90A12PA8MX19 464 aa11.34□□□□□ -0.59
CAPN1-212ENST00000527887 FAM90A5PA8MXJ8 464 aa11.34□□□□□ -0.59
CAPN1-212ENST00000527887 J3QR06 171 aa11.34□□□□□ -0.59
CAPN1-212ENST00000527887 CSTBP04080 98 aaKnown RBP11.34□□□□□ -0.59
CAPN1-212ENST00000527887 FAM90A15PP0C7V4 464 aa11.34□□□□□ -0.59
CAPN1-212ENST00000527887 FAM90A13PP0C7W8 464 aa11.34□□□□□ -0.59
CAPN1-212ENST00000527887 FAM90A14PP0C7W9 464 aa11.34□□□□□ -0.59
CAPN1-212ENST00000527887 FAM90A24PP0C7X0 464 aa11.34□□□□□ -0.59
CAPN1-212ENST00000527887 MYL9P24844 172 aa11.34□□□□□ -0.59
CAPN1-212ENST00000527887 NFYBP25208 207 aa11.34□□□□□ -0.59
CAPN1-212ENST00000527887 ZNF93P35789 620 aaPredicted RBP11.34□□□□□ -0.59
CAPN1-212ENST00000527887 GDNFP39905 211 aa11.34□□□□□ -0.59
CAPN1-212ENST00000527887 GLP1RP43220 463 aa11.34□□□□□ -0.59
CAPN1-212ENST00000527887 RAB7AP51149 207 aa11.34□□□□□ -0.59
CAPN1-212ENST00000527887 PSMD7P51665 324 aa11.34□□□□□ -0.59
CAPN1-212ENST00000527887 GPR176Q14439 515 aa11.34□□□□□ -0.59
CAPN1-212ENST00000527887 Q499Y3 187 aa11.34□□□□□ -0.59
CAPN1-212ENST00000527887 RSBN1Q5VWQ0 802 aaPredicted RBP11.34□□□□□ -0.59
CAPN1-212ENST00000527887 Q6ZS46 218 aa11.34□□□□□ -0.59
CAPN1-212ENST00000527887 OSR2Q8N2R0 312 aa11.34□□□□□ -0.59
CAPN1-212ENST00000527887 WFDC9Q8NEX5 89 aa11.34□□□□□ -0.59
CAPN1-212ENST00000527887 OR51A2Q8NGJ7 313 aa11.34□□□□□ -0.59
CAPN1-212ENST00000527887 RGP1Q92546 391 aaPredicted RBP11.34□□□□□ -0.59
CAPN1-212ENST00000527887 AP3S1Q92572 193 aa11.34□□□□□ -0.59
CAPN1-212ENST00000527887 RPEQ96AT9 228 aa11.34□□□□□ -0.59
CAPN1-212ENST00000527887 ING3Q9NXR8 418 aa11.34□□□□□ -0.59
CAPN1-212ENST00000527887 TAS2R4Q9NYW5 299 aa11.34□□□□□ -0.59
CAPN1-212ENST00000527887 KIF25Q9UIL4 384 aa11.34□□□□□ -0.59
CAPN1-212ENST00000527887 ST3GAL6Q9Y274 331 aa11.34□□□□□ -0.59
CAPN1-212ENST00000527887 ADARB2-AS1A8MUL3 147 aa11.33□□□□□ -0.6
CAPN1-212ENST00000527887 CDRT1O95170 752 aa11.33□□□□□ -0.6
CAPN1-212ENST00000527887 HTR3BO95264 441 aa11.33□□□□□ -0.6
CAPN1-212ENST00000527887 BDKRB2P30411 391 aa11.33□□□□□ -0.6
CAPN1-212ENST00000527887 SDC2P34741 201 aa11.33□□□□□ -0.6
CAPN1-212ENST00000527887 OR3A4PP47883 348 aa11.33□□□□□ -0.6
CAPN1-212ENST00000527887 MADCAM1Q13477 382 aa11.33□□□□□ -0.6
CAPN1-212ENST00000527887 MPV17LQ2QL34 196 aa11.33□□□□□ -0.6
CAPN1-212ENST00000527887 ABCA11PQ4W5N1 156 aa11.33□□□□□ -0.6
CAPN1-212ENST00000527887 OR8H3Q8N146 312 aa11.33□□□□□ -0.6
CAPN1-212ENST00000527887 OR13A1Q8NGR1 328 aa11.33□□□□□ -0.6
CAPN1-212ENST00000527887 MCFD2Q8NI22 146 aa11.33□□□□□ -0.6
CAPN1-212ENST00000527887 S100ZQ8WXG8 99 aa11.33□□□□□ -0.6
CAPN1-212ENST00000527887 ACOT12Q8WYK0 555 aa11.33□□□□□ -0.6
CAPN1-212ENST00000527887 KCTD12Q96CX2 325 aaKnown RBP11.33□□□□□ -0.6
CAPN1-212ENST00000527887 DPCDQ9BVM2 203 aaPredicted RBP11.33□□□□□ -0.6
CAPN1-212ENST00000527887 CKLFQ9UBR5 152 aa11.33□□□□□ -0.6
CAPN1-212ENST00000527887 ING4Q9UNL4 249 aa11.33□□□□□ -0.6
CAPN1-212ENST00000527887 TSSC4Q9Y5U2 329 aaPredicted RBP11.33□□□□□ -0.6
CAPN1-212ENST00000527887 TRBV5-7A0A0A0MS05 114 aa11.32□□□□□ -0.6
CAPN1-212ENST00000527887 FAM172BPA6NC97 362 aa11.32□□□□□ -0.6
CAPN1-212ENST00000527887 HSPB6O14558 160 aa11.32□□□□□ -0.6
CAPN1-212ENST00000527887 PDCD5O14737 125 aa11.32□□□□□ -0.6
CAPN1-212ENST00000527887 LPLP06858 475 aa11.32□□□□□ -0.6
CAPN1-212ENST00000527887 IGFBP3P17936 291 aaPredicted RBP11.32□□□□□ -0.6
CAPN1-212ENST00000527887 CD24P25063 80 aa11.32□□□□□ -0.6
CAPN1-212ENST00000527887 RANBP1P43487 201 aa11.32□□□□□ -0.6
CAPN1-212ENST00000527887 RBM39Q14498 530 aaKnown RBP11.32□□□□□ -0.6
CAPN1-212ENST00000527887 PIGYQ3MUY2 71 aa11.32□□□□□ -0.6
CAPN1-212ENST00000527887 HSD17B12Q53GQ0 312 aa11.32□□□□□ -0.6
CAPN1-212ENST00000527887 FBLN7Q53RD9 439 aa11.32□□□□□ -0.6
CAPN1-212ENST00000527887 DDI2Q5TDH0 399 aa11.32□□□□□ -0.6
CAPN1-212ENST00000527887 CDH26Q8IXH8 852 aa11.32□□□□□ -0.6
CAPN1-212ENST00000527887 LYG1Q8N1E2 194 aa11.32□□□□□ -0.6
CAPN1-212ENST00000527887 OR4X2Q8NGF9 303 aa11.32□□□□□ -0.6
CAPN1-212ENST00000527887 OR52M1Q8NGK5 317 aa11.32□□□□□ -0.6
CAPN1-212ENST00000527887 OR10K1Q8NGX5 313 aa11.32□□□□□ -0.6
CAPN1-212ENST00000527887 TOMM40LQ969M1 308 aa11.32□□□□□ -0.6
CAPN1-212ENST00000527887 MRPS24Q96EL2 167 aaKnown RBP11.32□□□□□ -0.6
CAPN1-212ENST00000527887 DERL3Q96Q80 235 aa11.32□□□□□ -0.6
CAPN1-212ENST00000527887 RNF167Q9H6Y7 350 aa11.32□□□□□ -0.6
CAPN1-212ENST00000527887 SPACA1Q9HBV2 294 aa11.32□□□□□ -0.6
CAPN1-212ENST00000527887 PSG11Q9UQ72 335 aa11.32□□□□□ -0.6
CAPN1-212ENST00000527887 MOB4Q9Y3A3 225 aa11.32□□□□□ -0.6
CAPN1-212ENST00000527887 PEX16Q9Y5Y5 336 aa11.32□□□□□ -0.6
CAPN1-212ENST00000527887 TMEM30CPA0ZSE6 113 aa11.31□□□□□ -0.6
CAPN1-212ENST00000527887 FGF16O43320 207 aa11.31□□□□□ -0.6
CAPN1-212ENST00000527887 OR7C1O76099 320 aaPredicted RBP11.31□□□□□ -0.6
CAPN1-212ENST00000527887 AMY1AP04745 511 aa11.31□□□□□ -0.6
CAPN1-212ENST00000527887 AMY2AP04746 511 aa11.31□□□□□ -0.6
CAPN1-212ENST00000527887 GTF2F2P13984 249 aa11.31□□□□□ -0.6
CAPN1-212ENST00000527887 SRMP19623 302 aa11.31□□□□□ -0.6
CAPN1-212ENST00000527887 CALRP27797 417 aaKnown RBP11.31□□□□□ -0.6
CAPN1-212ENST00000527887 TGFBR1P36897 503 aa11.31□□□□□ -0.6
CAPN1-212ENST00000527887 RBM11P57052 281 aaKnown RBP11.31□□□□□ -0.6
CAPN1-212ENST00000527887 Q3ZCU0 254 aa11.31□□□□□ -0.6
CAPN1-212ENST00000527887 HIST2H2BDQ6DRA6 164 aa11.31□□□□□ -0.6
CAPN1-212ENST00000527887 C8orf31Q8N9H6 132 aa11.31□□□□□ -0.6
CAPN1-212ENST00000527887 SUMF2Q8NBJ7 301 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms