RNA–Protein interactions for RNA: ENST00000527881.1

TSKU-203, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSKU, Length 3,554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-203ENST00000527881 ADMP35318 185 aa10.76□□□□□ -0.69
TSKU-203ENST00000527881 EFNA3P52797 238 aa10.76□□□□□ -0.69
TSKU-203ENST00000527881 KLF3P57682 345 aaPredicted RBP10.76□□□□□ -0.69
TSKU-203ENST00000527881 SPATA45Q537H7 98 aa10.76□□□□□ -0.69
TSKU-203ENST00000527881 MRPL43Q8N983 215 aaKnown RBP10.76□□□□□ -0.69
TSKU-203ENST00000527881 PLPPR1Q8TBJ4 325 aa10.76□□□□□ -0.69
TSKU-203ENST00000527881 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.76□□□□□ -0.69
TSKU-203ENST00000527881 MBD3L1Q8WWY6 194 aa10.76□□□□□ -0.69
TSKU-203ENST00000527881 PARD6GQ9BYG4 376 aaPredicted RBP10.76□□□□□ -0.69
TSKU-203ENST00000527881 UNC13CQ8NB66 2214 aa10.76□□□□□ -0.69
TSKU-203ENST00000527881 VCANP13611 3396 aa10.76□□□□□ -0.69
TSKU-203ENST00000527881 H3BMH7 237 aa10.76□□□□□ -0.69
TSKU-203ENST00000527881 SERF1AO75920 110 aa10.76□□□□□ -0.69
TSKU-203ENST00000527881 IGHEP01854 428 aa10.76□□□□□ -0.69
TSKU-203ENST00000527881 CELA2BP08218 269 aaPredicted RBP10.76□□□□□ -0.69
TSKU-203ENST00000527881 S100GP29377 79 aa10.76□□□□□ -0.69
TSKU-203ENST00000527881 UBE2G2P60604 165 aa10.76□□□□□ -0.69
TSKU-203ENST00000527881 ID3Q02535 119 aa10.76□□□□□ -0.69
TSKU-203ENST00000527881 VAMP3Q15836 100 aa10.76□□□□□ -0.69
TSKU-203ENST00000527881 VHLLQ6RSH7 139 aa10.76□□□□□ -0.69
TSKU-203ENST00000527881 UNQ5815/PRO19632Q6UWF5 114 aa10.76□□□□□ -0.69
TSKU-203ENST00000527881 SHISA6Q6ZSJ9 500 aa10.76□□□□□ -0.69
TSKU-203ENST00000527881 ODF3L1Q8IXM7 274 aa10.76□□□□□ -0.69
TSKU-203ENST00000527881 STARD4Q96DR4 205 aa10.76□□□□□ -0.69
TSKU-203ENST00000527881 WDYHV1Q96HA8 205 aa10.76□□□□□ -0.69
TSKU-203ENST00000527881 GABRG3Q99928 467 aa10.76□□□□□ -0.69
TSKU-203ENST00000527881 CD300LBA8K4G0 201 aa10.75□□□□□ -0.69
TSKU-203ENST00000527881 DIRC3C9JPN6 131 aa10.75□□□□□ -0.69
TSKU-203ENST00000527881 CRYAAP02489 173 aa10.75□□□□□ -0.69
TSKU-203ENST00000527881 TCN2P20062 427 aa10.75□□□□□ -0.69
TSKU-203ENST00000527881 SELENOTP62341 195 aa10.75□□□□□ -0.69
TSKU-203ENST00000527881 ZNF818PQ6ZRF7 136 aa10.75□□□□□ -0.69
TSKU-203ENST00000527881 ERASQ7Z444 233 aa10.75□□□□□ -0.69
TSKU-203ENST00000527881 C11orf1Q9H5F2 150 aa10.75□□□□□ -0.69
TSKU-203ENST00000527881 CCL28Q9NRJ3 127 aa10.75□□□□□ -0.69
TSKU-203ENST00000527881 ZNF586Q9NXT0 402 aa10.75□□□□□ -0.69
TSKU-203ENST00000527881 C1QTNF9BB2RNN3 333 aa10.75□□□□□ -0.69
TSKU-203ENST00000527881 TPTE2P1Q5T6R2 138 aa10.75□□□□□ -0.69
TSKU-203ENST00000527881 SMIM15Q7Z3B0 74 aa10.75□□□□□ -0.69
TSKU-203ENST00000527881 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.75□□□□□ -0.69
TSKU-203ENST00000527881 OR10V1Q8NGI7 309 aa10.75□□□□□ -0.69
TSKU-203ENST00000527881 ADIPOR1Q96A54 375 aa10.75□□□□□ -0.69
TSKU-203ENST00000527881 PINX1Q96BK5 328 aaKnown RBP10.75□□□□□ -0.69
TSKU-203ENST00000527881 NKX6-3A6NJ46 265 aa10.75□□□□□ -0.69
TSKU-203ENST00000527881 TDGF1P13385 188 aa10.75□□□□□ -0.69
TSKU-203ENST00000527881 HNRNPA2B1P22626 353 aaKnown RBP10.75□□□□□ -0.69
TSKU-203ENST00000527881 CBLN1P23435 193 aa10.75□□□□□ -0.69
TSKU-203ENST00000527881 NEIL1Q96FI4 390 aaPredicted RBP10.75□□□□□ -0.69
TSKU-203ENST00000527881 LAMTOR2Q9Y2Q5 125 aa10.75□□□□□ -0.69
TSKU-203ENST00000527881 RBM7Q9Y580 266 aaKnown RBP10.75□□□□□ -0.69
TSKU-203ENST00000527881 BLACEA4D250 179 aa10.74□□□□□ -0.69
TSKU-203ENST00000527881 PAFAH1B2P68402 229 aa10.74□□□□□ -0.69
TSKU-203ENST00000527881 EIF3IQ13347 325 aaKnown RBP10.74□□□□□ -0.69
TSKU-203ENST00000527881 TEX43Q6ZNM6 134 aa10.74□□□□□ -0.69
TSKU-203ENST00000527881 OSR2Q8N2R0 312 aa10.74□□□□□ -0.69
TSKU-203ENST00000527881 ZNF738Q8NE65 137 aa10.74□□□□□ -0.69
TSKU-203ENST00000527881 SIGLEC12Q96PQ1 595 aa10.74□□□□□ -0.69
TSKU-203ENST00000527881 WNT16Q9UBV4 365 aa10.74□□□□□ -0.69
TSKU-203ENST00000527881 MDFIC2A0A1B0GVS7 189 aa10.74□□□□□ -0.69
TSKU-203ENST00000527881 PMCHP20382 165 aa10.74□□□□□ -0.69
TSKU-203ENST00000527881 CDKN1BP46527 198 aa10.74□□□□□ -0.69
TSKU-203ENST00000527881 PAX9P55771 341 aa10.74□□□□□ -0.69
TSKU-203ENST00000527881 ZP4Q12836 540 aa10.74□□□□□ -0.69
TSKU-203ENST00000527881 RUNX3Q13761 415 aa10.74□□□□□ -0.69
TSKU-203ENST00000527881 FFAR4Q5NUL3 377 aa10.74□□□□□ -0.69
TSKU-203ENST00000527881 OR4C12Q96R67 309 aa10.74□□□□□ -0.69
TSKU-203ENST00000527881 RAB40CQ96S21 281 aa10.74□□□□□ -0.69
TSKU-203ENST00000527881 CACNG5Q9UF02 275 aa10.74□□□□□ -0.69
TSKU-203ENST00000527881 A6NCN8 305 aa10.74□□□□□ -0.69
TSKU-203ENST00000527881 PGPEP1LA6NFU8 196 aa10.74□□□□□ -0.69
TSKU-203ENST00000527881 TMEM250H0YL14 139 aa10.74□□□□□ -0.69
TSKU-203ENST00000527881 M0R135 149 aa10.74□□□□□ -0.69
TSKU-203ENST00000527881 TLX3O43711 291 aaPredicted RBP10.74□□□□□ -0.69
TSKU-203ENST00000527881 NXPH2O95156 264 aa10.74□□□□□ -0.69
TSKU-203ENST00000527881 KITLGP21583 273 aa10.74□□□□□ -0.69
TSKU-203ENST00000527881 MPLP40238 635 aa10.74□□□□□ -0.69
TSKU-203ENST00000527881 RPS16P62249 146 aaKnown RBP10.74□□□□□ -0.69
TSKU-203ENST00000527881 LCN2P80188 198 aa10.74□□□□□ -0.69
TSKU-203ENST00000527881 SERF2P84101 59 aa10.74□□□□□ -0.69
TSKU-203ENST00000527881 CADM4Q8NFZ8 388 aa10.74□□□□□ -0.69
TSKU-203ENST00000527881 OR4B1Q8NGF8 309 aa10.74□□□□□ -0.69
TSKU-203ENST00000527881 PSMF1Q92530 271 aa10.74□□□□□ -0.69
TSKU-203ENST00000527881 ZNF799Q96GE5 643 aa10.74□□□□□ -0.69
TSKU-203ENST00000527881 TMEM56Q96MV1 263 aa10.74□□□□□ -0.69
TSKU-203ENST00000527881 ALKBH3Q96Q83 286 aaPredicted RBP10.74□□□□□ -0.69
TSKU-203ENST00000527881 KLRF1Q9NZS2 232 aa10.74□□□□□ -0.69
TSKU-203ENST00000527881 TMEM56-RWDD3S4R434 201 aa10.74□□□□□ -0.69
TSKU-203ENST00000527881 THSD7BQ9C0I4 1608 aa10.73□□□□□ -0.69
TSKU-203ENST00000527881 TDRD6O60522 2096 aaKnown RBP10.73□□□□□ -0.69
TSKU-203ENST00000527881 TSPAN2O60636 221 aa10.73□□□□□ -0.69
TSKU-203ENST00000527881 CCL1P22362 96 aa10.73□□□□□ -0.69
TSKU-203ENST00000527881 ARF1P84077 181 aaKnown RBP10.73□□□□□ -0.69
TSKU-203ENST00000527881 ZNF90Q03938 601 aa10.73□□□□□ -0.69
TSKU-203ENST00000527881 SP5Q6BEB4 398 aaPredicted RBP10.73□□□□□ -0.69
TSKU-203ENST00000527881 AGMATQ9BSE5 352 aa10.73□□□□□ -0.69
TSKU-203ENST00000527881 ALKBH4Q9NXW9 302 aa10.73□□□□□ -0.69
TSKU-203ENST00000527881 UQCR10Q9UDW1 63 aa10.73□□□□□ -0.69
TSKU-203ENST00000527881 PXMP4Q9Y6I8 212 aa10.73□□□□□ -0.69
TSKU-203ENST00000527881 DIDO1Q9BTC0 2240 aaKnown RBP10.73□□□□□ -0.69
TSKU-203ENST00000527881 LIPT2A6NK58 231 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms