RNA–Protein interactions for RNA: ENST00000527817.1

SRPRA-202, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 687 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-202ENST00000527817 IFT22Q9H7X7 185 aa9.45□□□□□ -0.9
SRPRA-202ENST00000527817 ZNF446Q9NWS9 450 aa9.45□□□□□ -0.9
SRPRA-202ENST00000527817 STUB1Q9UNE7 303 aa9.45□□□□□ -0.9
SRPRA-202ENST00000527817 ERGIC3Q9Y282 383 aa9.45□□□□□ -0.9
SRPRA-202ENST00000527817 TMEM30CPA0ZSE6 113 aa9.44□□□□□ -0.9
SRPRA-202ENST00000527817 SULT1B1O43704 296 aa9.44□□□□□ -0.9
SRPRA-202ENST00000527817 LANCL1O43813 399 aa9.44□□□□□ -0.9
SRPRA-202ENST00000527817 HTR1AP08908 422 aa9.44□□□□□ -0.9
SRPRA-202ENST00000527817 MMDQ15546 238 aa9.44□□□□□ -0.9
SRPRA-202ENST00000527817 PIGYQ3MUY2 71 aa9.44□□□□□ -0.9
SRPRA-202ENST00000527817 C19orf54Q5BKX5 351 aa9.44□□□□□ -0.9
SRPRA-202ENST00000527817 CT45A1Q5HYN5 189 aa9.44□□□□□ -0.9
SRPRA-202ENST00000527817 LIN54Q6MZP7 749 aa9.44□□□□□ -0.9
SRPRA-202ENST00000527817 SERPINA12Q8IW75 414 aa9.44□□□□□ -0.9
SRPRA-202ENST00000527817 ZNF439Q8NDP4 499 aa9.44□□□□□ -0.9
SRPRA-202ENST00000527817 CT45A3Q8NHU0 189 aa9.44□□□□□ -0.9
SRPRA-202ENST00000527817 CCDC124Q96CT7 223 aaKnown RBP9.44□□□□□ -0.9
SRPRA-202ENST00000527817 MED4Q9NPJ6 270 aa9.44□□□□□ -0.9
SRPRA-202ENST00000527817 PARP11Q9NR21 331 aa9.44□□□□□ -0.9
SRPRA-202ENST00000527817 HERC2O95714 4834 aa9.43□□□□□ -0.9
SRPRA-202ENST00000527817 IGHV3-43A0A0B4J1X8 118 aa9.43□□□□□ -0.9
SRPRA-202ENST00000527817 OR4C45A6NMZ5 311 aa9.43□□□□□ -0.9
SRPRA-202ENST00000527817 SLC31A2O15432 143 aa9.43□□□□□ -0.9
SRPRA-202ENST00000527817 MITFO75030 526 aaPredicted RBP9.43□□□□□ -0.9
SRPRA-202ENST00000527817 FKBP6O75344 327 aa9.43□□□□□ -0.9
SRPRA-202ENST00000527817 MT-ND4P03905 459 aa9.43□□□□□ -0.9
SRPRA-202ENST00000527817 RPSAP08865 295 aaKnown RBP9.43□□□□□ -0.9
SRPRA-202ENST00000527817 IGHV3-43DP0DP04 118 aa9.43□□□□□ -0.9
SRPRA-202ENST00000527817 BLVRBP30043 206 aaPredicted RBP9.43□□□□□ -0.9
SRPRA-202ENST00000527817 CRIP2P52943 208 aaPredicted RBP9.43□□□□□ -0.9
SRPRA-202ENST00000527817 ACTBP60709 375 aa9.43□□□□□ -0.9
SRPRA-202ENST00000527817 LSAMPQ13449 338 aa9.43□□□□□ -0.9
SRPRA-202ENST00000527817 RSU1Q15404 277 aa9.43□□□□□ -0.9
SRPRA-202ENST00000527817 ZSCAN26Q16670 478 aa9.43□□□□□ -0.9
SRPRA-202ENST00000527817 C5orf64Q2M2E5 130 aa9.43□□□□□ -0.9
SRPRA-202ENST00000527817 ANKRD13BQ86YJ7 626 aa9.43□□□□□ -0.9
SRPRA-202ENST00000527817 PARP16Q8N5Y8 322 aa9.43□□□□□ -0.9
SRPRA-202ENST00000527817 RITA1Q96K30 269 aa9.43□□□□□ -0.9
SRPRA-202ENST00000527817 ANKRD60Q9BZ19 345 aa9.43□□□□□ -0.9
SRPRA-202ENST00000527817 NUBP2Q9Y5Y2 271 aa9.43□□□□□ -0.9
SRPRA-202ENST00000527817 SOX15O60248 233 aa9.42□□□□□ -0.9
SRPRA-202ENST00000527817 ARSBP15848 533 aa9.42□□□□□ -0.9
SRPRA-202ENST00000527817 RAB40BQ12829 278 aa9.42□□□□□ -0.9
SRPRA-202ENST00000527817 ALKBH1Q13686 389 aaKnown RBP9.42□□□□□ -0.9
SRPRA-202ENST00000527817 TMEM30BQ3MIR4 351 aa9.42□□□□□ -0.9
SRPRA-202ENST00000527817 NHLRC3Q5JS37 347 aa9.42□□□□□ -0.9
SRPRA-202ENST00000527817 ZNF660Q6AZW8 331 aaPredicted RBP9.42□□□□□ -0.9
SRPRA-202ENST00000527817 KDM4DQ6B0I6 523 aa9.42□□□□□ -0.9
SRPRA-202ENST00000527817 ZNF497Q6ZNH5 498 aa9.42□□□□□ -0.9
SRPRA-202ENST00000527817 TCTEX1D1Q8N7M0 179 aa9.42□□□□□ -0.9
SRPRA-202ENST00000527817 NPBQ8NG41 125 aa9.42□□□□□ -0.9
SRPRA-202ENST00000527817 OR8J1Q8NGP2 316 aa9.42□□□□□ -0.9
SRPRA-202ENST00000527817 OR10K1Q8NGX5 313 aa9.42□□□□□ -0.9
SRPRA-202ENST00000527817 UBALD1Q8TB05 177 aa9.42□□□□□ -0.9
SRPRA-202ENST00000527817 CCDC107Q8WV48 283 aa9.42□□□□□ -0.9
SRPRA-202ENST00000527817 TNFAIP8L1Q8WVP5 186 aa9.42□□□□□ -0.9
SRPRA-202ENST00000527817 RFKQ969G6 155 aa9.42□□□□□ -0.9
SRPRA-202ENST00000527817 CPNE2Q96FN4 548 aaPredicted RBP9.42□□□□□ -0.9
SRPRA-202ENST00000527817 RHOVQ96L33 236 aa9.42□□□□□ -0.9
SRPRA-202ENST00000527817 ZNF251Q9BRH9 671 aa9.42□□□□□ -0.9
SRPRA-202ENST00000527817 CST11Q9H112 138 aa9.42□□□□□ -0.9
SRPRA-202ENST00000527817 TUBA4BQ9H853 241 aa9.42□□□□□ -0.9
SRPRA-202ENST00000527817 RAB9BQ9NP90 201 aa9.42□□□□□ -0.9
SRPRA-202ENST00000527817 ZNF581Q9P0T4 197 aa9.42□□□□□ -0.9
SRPRA-202ENST00000527817 FOXA2Q9Y261 457 aaPredicted RBP9.42□□□□□ -0.9
SRPRA-202ENST00000527817 ST3GAL6Q9Y274 331 aa9.42□□□□□ -0.9
SRPRA-202ENST00000527817 KMT2AQ03164 3969 aa9.41□□□□□ -0.9
SRPRA-202ENST00000527817 A0A1W2PN81 502 aa9.41□□□□□ -0.9
SRPRA-202ENST00000527817 TCRBV3S1A0A5B6 114 aa9.41□□□□□ -0.9
SRPRA-202ENST00000527817 C12orf77C9JDV5 145 aa9.41□□□□□ -0.9
SRPRA-202ENST00000527817 H0Y980 276 aa9.41□□□□□ -0.9
SRPRA-202ENST00000527817 J3QRE1 110 aa9.41□□□□□ -0.9
SRPRA-202ENST00000527817 GABRPO00591 440 aa9.41□□□□□ -0.9
SRPRA-202ENST00000527817 SLC16A6O15403 523 aa9.41□□□□□ -0.9
SRPRA-202ENST00000527817 NBR2O15453 112 aa9.41□□□□□ -0.9
SRPRA-202ENST00000527817 MAGEB3O15480 346 aa9.41□□□□□ -0.9
SRPRA-202ENST00000527817 SPINT2O43291 252 aa9.41□□□□□ -0.9
SRPRA-202ENST00000527817 HTR3BO95264 441 aa9.41□□□□□ -0.9
SRPRA-202ENST00000527817 T-ENOLP0DO92 83 aa9.41□□□□□ -0.9
SRPRA-202ENST00000527817 CALB2P22676 271 aa9.41□□□□□ -0.9
SRPRA-202ENST00000527817 CNTFRP26992 372 aa9.41□□□□□ -0.9
SRPRA-202ENST00000527817 CHRNA7P36544 502 aa9.41□□□□□ -0.9
SRPRA-202ENST00000527817 TMEM267Q0VDI3 215 aaPredicted RBP9.41□□□□□ -0.9
SRPRA-202ENST00000527817 PYHIN1Q6K0P9 492 aa9.41□□□□□ -0.9
SRPRA-202ENST00000527817 ZNF529Q6P280 563 aa9.41□□□□□ -0.9
SRPRA-202ENST00000527817 SATL1Q86VE3 508 aa9.41□□□□□ -0.9
SRPRA-202ENST00000527817 SPATA24Q86W54 205 aa9.41□□□□□ -0.9
SRPRA-202ENST00000527817 PELI1Q96FA3 418 aa9.41□□□□□ -0.9
SRPRA-202ENST00000527817 GPER1Q99527 375 aa9.41□□□□□ -0.9
SRPRA-202ENST00000527817 RIBC2Q9H4K1 309 aa9.41□□□□□ -0.9
SRPRA-202ENST00000527817 ENOPH1Q9UHY7 261 aa9.41□□□□□ -0.9
SRPRA-202ENST00000527817 DAPL1A0PJW8 107 aa9.4□□□□□ -0.9
SRPRA-202ENST00000527817 OR7C1O76099 320 aaPredicted RBP9.4□□□□□ -0.9
SRPRA-202ENST00000527817 NDUFA3O95167 84 aa9.4□□□□□ -0.9
SRPRA-202ENST00000527817 CSTBP04080 98 aaKnown RBP9.4□□□□□ -0.9
SRPRA-202ENST00000527817 EGR2P11161 476 aaPredicted RBP9.4□□□□□ -0.9
SRPRA-202ENST00000527817 RAB3AP20336 220 aa9.4□□□□□ -0.9
SRPRA-202ENST00000527817 CD200R1LQ6Q8B3 271 aa9.4□□□□□ -0.9
SRPRA-202ENST00000527817 LINC00322Q6ZN03 302 aaPredicted RBP9.4□□□□□ -0.9
SRPRA-202ENST00000527817 LINC00596Q86U02 117 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms