RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 SERTAD4Q9NUC0 356 aa12.92□□□□□ -0.34
USP47-207ENST00000527733 E9PLN8 166 aa12.92□□□□□ -0.34
USP47-207ENST00000527733 BRS3P32247 399 aa12.92□□□□□ -0.34
USP47-207ENST00000527733 DBX2Q6ZNG2 339 aa12.92□□□□□ -0.34
USP47-207ENST00000527733 VKORC1Q9BQB6 163 aa12.92□□□□□ -0.34
USP47-207ENST00000527733 PLSCR3Q9NRY6 295 aa12.92□□□□□ -0.34
USP47-207ENST00000527733 PRR32B1ATL7 298 aa12.92□□□□□ -0.34
USP47-207ENST00000527733 ADAM10O14672 748 aa12.92□□□□□ -0.34
USP47-207ENST00000527733 HBZP02008 142 aa12.92□□□□□ -0.34
USP47-207ENST00000527733 SNRNP70P08621 437 aaKnown RBP12.92□□□□□ -0.34
USP47-207ENST00000527733 APOBEC3AP31941 199 aaPredicted RBP12.92□□□□□ -0.34
USP47-207ENST00000527733 PSG7Q13046 419 aa12.92□□□□□ -0.34
USP47-207ENST00000527733 EXOSC2Q13868 293 aaKnown RBP12.92□□□□□ -0.34
USP47-207ENST00000527733 FAM209AQ5JX71 171 aa12.92□□□□□ -0.34
USP47-207ENST00000527733 OR2C3Q8N628 320 aa12.92□□□□□ -0.34
USP47-207ENST00000527733 OR13D1Q8NGV5 346 aa12.92□□□□□ -0.34
USP47-207ENST00000527733 A0A0U1RQK1 487 aa12.91□□□□□ -0.34
USP47-207ENST00000527733 CDRT15L2A8MXV6 281 aa12.91□□□□□ -0.34
USP47-207ENST00000527733 F2RP25116 425 aa12.91□□□□□ -0.34
USP47-207ENST00000527733 ERVS71-1P61550 626 aa12.91□□□□□ -0.34
USP47-207ENST00000527733 HMGN3Q15651 99 aa12.91□□□□□ -0.34
USP47-207ENST00000527733 IGSF11Q5DX21 431 aa12.91□□□□□ -0.34
USP47-207ENST00000527733 LHX4Q969G2 390 aa12.91□□□□□ -0.34
USP47-207ENST00000527733 ACTR3CQ9C0K3 210 aaPredicted RBP12.91□□□□□ -0.34
USP47-207ENST00000527733 ASCL3Q9NQ33 180 aa12.91□□□□□ -0.34
USP47-207ENST00000527733 PRR13Q9NZ81 148 aa12.91□□□□□ -0.34
USP47-207ENST00000527733 PUS1Q9Y606 427 aaKnown RBP eCLIP12.91□□□□□ -0.34
USP47-207ENST00000527733 SNRNP200O75643 2136 aaKnown RBP12.91□□□□□ -0.34
USP47-207ENST00000527733 OR5G3P0C626 314 aa12.91□□□□□ -0.34
USP47-207ENST00000527733 TIMP3P35625 211 aa12.91□□□□□ -0.34
USP47-207ENST00000527733 RAB5CP51148 216 aa12.91□□□□□ -0.34
USP47-207ENST00000527733 B3GALT5-AS1P59052 145 aa12.91□□□□□ -0.34
USP47-207ENST00000527733 OR2B8PP59922 312 aa12.91□□□□□ -0.34
USP47-207ENST00000527733 KHDC1LQ5JSQ8 128 aa12.91□□□□□ -0.34
USP47-207ENST00000527733 RPUSD3Q6P087 351 aaKnown RBP12.91□□□□□ -0.34
USP47-207ENST00000527733 CLEC2AQ6UVW9 174 aa12.91□□□□□ -0.34
USP47-207ENST00000527733 ADAD2Q8NCV1 583 aaKnown RBP12.91□□□□□ -0.34
USP47-207ENST00000527733 Q9N2K0 584 aa12.91□□□□□ -0.34
USP47-207ENST00000527733 VSIG4Q9Y279 399 aa12.91□□□□□ -0.34
USP47-207ENST00000527733 DENND4CQ5VZ89 1909 aa12.91□□□□□ -0.34
USP47-207ENST00000527733 PCNX1Q96RV3 2341 aa12.91□□□□□ -0.34
USP47-207ENST00000527733 A0A0G2JK05 382 aa12.91□□□□□ -0.34
USP47-207ENST00000527733 ODAMA1E959 279 aa12.91□□□□□ -0.34
USP47-207ENST00000527733 TAS2R45P59539 299 aa12.91□□□□□ -0.34
USP47-207ENST00000527733 LY6DQ14210 128 aa12.91□□□□□ -0.34
USP47-207ENST00000527733 LCN15Q6UWW0 184 aa12.91□□□□□ -0.34
USP47-207ENST00000527733 DTX1Q86Y01 620 aa12.91□□□□□ -0.34
USP47-207ENST00000527733 RELL2Q8NC24 303 aaPredicted RBP12.91□□□□□ -0.34
USP47-207ENST00000527733 NEIL1Q96FI4 390 aaPredicted RBP12.91□□□□□ -0.34
USP47-207ENST00000527733 ZNF714Q96N38 554 aa12.91□□□□□ -0.34
USP47-207ENST00000527733 RPH3ALQ9UNE2 315 aa12.91□□□□□ -0.34
USP47-207ENST00000527733 INSIG2Q9Y5U4 225 aa12.91□□□□□ -0.34
USP47-207ENST00000527733 SCN8AQ9UQD0 1980 aa12.91□□□□□ -0.34
USP47-207ENST00000527733 RPS10-NUDT3A0A1W2PQS6 291 aa12.91□□□□□ -0.34
USP47-207ENST00000527733 CELA3BP08861 270 aa12.91□□□□□ -0.34
USP47-207ENST00000527733 SCTP09683 121 aa12.91□□□□□ -0.34
USP47-207ENST00000527733 RAB4BP61018 213 aa12.91□□□□□ -0.34
USP47-207ENST00000527733 ZNF154Q13106 437 aa12.91□□□□□ -0.34
USP47-207ENST00000527733 TMEM255AQ5JRV8 349 aa12.91□□□□□ -0.34
USP47-207ENST00000527733 GCSAMQ8N6F7 178 aa12.91□□□□□ -0.34
USP47-207ENST00000527733 DAZAP1Q96EP5 407 aaKnown RBP12.91□□□□□ -0.34
USP47-207ENST00000527733 UQCC1Q9NVA1 299 aa12.91□□□□□ -0.34
USP47-207ENST00000527733 CXCL3P19876 107 aa12.9□□□□□ -0.34
USP47-207ENST00000527733 UNQ6494/PRO21346Q6UXR6 183 aa12.9□□□□□ -0.34
USP47-207ENST00000527733 BORCS7Q96B45 105 aa12.9□□□□□ -0.34
USP47-207ENST00000527733 C7orf66A4D0T2 115 aa12.9□□□□□ -0.34
USP47-207ENST00000527733 ALX3O95076 343 aa12.9□□□□□ -0.34
USP47-207ENST00000527733 CDS2O95674 445 aa12.9□□□□□ -0.34
USP47-207ENST00000527733 CD200P41217 278 aa12.9□□□□□ -0.34
USP47-207ENST00000527733 CEBPDP49716 269 aaPredicted RBP12.9□□□□□ -0.34
USP47-207ENST00000527733 UBE2KP61086 200 aa12.9□□□□□ -0.34
USP47-207ENST00000527733 POLR2GP62487 172 aaKnown RBP eCLIP12.9□□□□□ -0.34
USP47-207ENST00000527733 OR10S1Q8NGN2 331 aa12.9□□□□□ -0.34
USP47-207ENST00000527733 CMTM2Q8TAZ6 248 aa12.9□□□□□ -0.34
USP47-207ENST00000527733 CYB5R3P00387 301 aaPredicted RBP12.9□□□□□ -0.34
USP47-207ENST00000527733 NQO2P16083 231 aa12.9□□□□□ -0.34
USP47-207ENST00000527733 BSPH1Q075Z2 132 aa12.9□□□□□ -0.34
USP47-207ENST00000527733 C1QL2Q7Z5L3 287 aa12.9□□□□□ -0.34
USP47-207ENST00000527733 RNASE6Q93091 150 aaKnown RBP12.9□□□□□ -0.34
USP47-207ENST00000527733 MRPL24Q96A35 216 aaKnown RBP12.9□□□□□ -0.34
USP47-207ENST00000527733 ACY3Q96HD9 319 aa12.9□□□□□ -0.34
USP47-207ENST00000527733 ST6GAL2Q96JF0 529 aa12.9□□□□□ -0.34
USP47-207ENST00000527733 MEGF10Q96KG7 1140 aa12.9□□□□□ -0.34
USP47-207ENST00000527733 HMSDA8MTL9 139 aa12.89□□□□□ -0.35
USP47-207ENST00000527733 NUDT19A8MXV4 375 aa12.89□□□□□ -0.35
USP47-207ENST00000527733 FGF7P21781 194 aa12.89□□□□□ -0.35
USP47-207ENST00000527733 AVPI1Q5T686 147 aa12.89□□□□□ -0.35
USP47-207ENST00000527733 ZNF318Q5VUA4 2279 aa12.89□□□□□ -0.35
USP47-207ENST00000527733 FAM24AA6NFZ4 105 aa12.89□□□□□ -0.35
USP47-207ENST00000527733 SYNGR2O43760 224 aa12.89□□□□□ -0.35
USP47-207ENST00000527733 RAB5BP61020 215 aa12.89□□□□□ -0.35
USP47-207ENST00000527733 NHLH1Q02575 133 aa12.89□□□□□ -0.35
USP47-207ENST00000527733 TCF15Q12870 199 aa12.89□□□□□ -0.35
USP47-207ENST00000527733 NIPSNAP3BQ9BS92 247 aa12.89□□□□□ -0.35
USP47-207ENST00000527733 NMES1Q9C002 83 aa12.89□□□□□ -0.35
USP47-207ENST00000527733 OPN4Q9UHM6 478 aa12.89□□□□□ -0.35
USP47-207ENST00000527733 IGHG3P01860 377 aa12.89□□□□□ -0.35
USP47-207ENST00000527733 PLAURQ03405 335 aa12.89□□□□□ -0.35
USP47-207ENST00000527733 FOXF2Q12947 444 aa12.89□□□□□ -0.35
USP47-207ENST00000527733 IL34Q6ZMJ4 242 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms