RNA–Protein interactions for RNA: ENST00000526954.5

CAPN1-205, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-205ENST00000526954 TMEM30BQ3MIR4 351 aa13.53□□□□□ -0.24
CAPN1-205ENST00000526954 C1orf229Q6ZS94 237 aaPredicted RBP13.53□□□□□ -0.24
CAPN1-205ENST00000526954 OR52M1Q8NGK5 317 aa13.53□□□□□ -0.24
CAPN1-205ENST00000526954 GCDHQ92947 438 aaPredicted RBP13.53□□□□□ -0.24
CAPN1-205ENST00000526954 TNFRSF14Q92956 283 aa13.53□□□□□ -0.24
CAPN1-205ENST00000526954 YAE1D1Q9NRH1 226 aa13.53□□□□□ -0.24
CAPN1-205ENST00000526954 IDI2-AS1Q9NZ38 188 aa13.53□□□□□ -0.24
CAPN1-205ENST00000526954 ANAPC10Q9UM13 185 aa13.53□□□□□ -0.24
CAPN1-205ENST00000526954 SESN1Q9Y6P5 492 aa13.53□□□□□ -0.24
CAPN1-205ENST00000526954 V9GYH0 126 aa13.53□□□□□ -0.24
CAPN1-205ENST00000526954 F8P00451 2351 aa13.53□□□□□ -0.24
CAPN1-205ENST00000526954 TLN2Q9Y4G6 2542 aa13.52□□□□□ -0.24
CAPN1-205ENST00000526954 A0A087X0M5 115 aa13.52□□□□□ -0.25
CAPN1-205ENST00000526954 A0A1B0GX30 115 aa13.52□□□□□ -0.25
CAPN1-205ENST00000526954 MMP23AO75900 390 aa13.52□□□□□ -0.25
CAPN1-205ENST00000526954 OMGP23515 440 aa13.52□□□□□ -0.25
CAPN1-205ENST00000526954 GDNFP39905 211 aa13.52□□□□□ -0.25
CAPN1-205ENST00000526954 LOXL3P58215 753 aa13.52□□□□□ -0.25
CAPN1-205ENST00000526954 HLA-DRB3P79483 266 aa13.52□□□□□ -0.25
CAPN1-205ENST00000526954 SPANXN2Q5MJ10 180 aa13.52□□□□□ -0.25
CAPN1-205ENST00000526954 PRAMEF5Q5TYX0 476 aa13.52□□□□□ -0.25
CAPN1-205ENST00000526954 NCR3LG1Q68D85 454 aa13.52□□□□□ -0.25
CAPN1-205ENST00000526954 OR52W1Q6IF63 320 aa13.52□□□□□ -0.25
CAPN1-205ENST00000526954 FAM131AQ6UXB0 335 aa13.52□□□□□ -0.25
CAPN1-205ENST00000526954 HOGA1Q86XE5 327 aa13.52□□□□□ -0.25
CAPN1-205ENST00000526954 OR1L1Q8NH94 360 aa13.52□□□□□ -0.25
CAPN1-205ENST00000526954 RFESDQ8TAC1 157 aa13.52□□□□□ -0.25
CAPN1-205ENST00000526954 GALMQ96C23 342 aa13.52□□□□□ -0.25
CAPN1-205ENST00000526954 KIRREL1Q96J84 757 aa13.52□□□□□ -0.25
CAPN1-205ENST00000526954 PCGF1Q9BSM1 259 aa13.52□□□□□ -0.25
CAPN1-205ENST00000526954 ST6GALNAC5Q9BVH7 336 aa13.52□□□□□ -0.25
CAPN1-205ENST00000526954 HEXA-AS1Q9H8Q6 139 aa13.52□□□□□ -0.25
CAPN1-205ENST00000526954 ZNF286AQ9HBT8 521 aa13.52□□□□□ -0.25
CAPN1-205ENST00000526954 IGKV1D-8A0A087WSZ0 117 aa13.51□□□□□ -0.25
CAPN1-205ENST00000526954 GABARAPH6UMI1 98 aa13.51□□□□□ -0.25
CAPN1-205ENST00000526954 DIRAS3O95661 229 aa13.51□□□□□ -0.25
CAPN1-205ENST00000526954 SCTP09683 121 aa13.51□□□□□ -0.25
CAPN1-205ENST00000526954 NAT1P18440 290 aa13.51□□□□□ -0.25
CAPN1-205ENST00000526954 CD34P28906 385 aa13.51□□□□□ -0.25
CAPN1-205ENST00000526954 HTD2P86397 168 aa13.51□□□□□ -0.25
CAPN1-205ENST00000526954 TEX29Q8N6K0 151 aa13.51□□□□□ -0.25
CAPN1-205ENST00000526954 GVQW1Q8N7I0 195 aa13.51□□□□□ -0.25
CAPN1-205ENST00000526954 OR4A4PQ8NGN8 299 aa13.51□□□□□ -0.25
CAPN1-205ENST00000526954 MAFIPQ8WZ33 124 aa13.51□□□□□ -0.25
CAPN1-205ENST00000526954 TMEM133Q9H2Q1 129 aa13.51□□□□□ -0.25
CAPN1-205ENST00000526954 GSX1Q9H4S2 264 aaPredicted RBP13.51□□□□□ -0.25
CAPN1-205ENST00000526954 SIRT7Q9NRC8 400 aa13.51□□□□□ -0.25
CAPN1-205ENST00000526954 FABP7O15540 132 aa13.5□□□□□ -0.25
CAPN1-205ENST00000526954 GSTZ1O43708 216 aaPredicted RBP13.5□□□□□ -0.25
CAPN1-205ENST00000526954 FSHBP01225 129 aa13.5□□□□□ -0.25
CAPN1-205ENST00000526954 GSTT2P0CG29 244 aa13.5□□□□□ -0.25
CAPN1-205ENST00000526954 GSTT2BP0CG30 244 aa13.5□□□□□ -0.25
CAPN1-205ENST00000526954 HOXB4P17483 251 aaPredicted RBP13.5□□□□□ -0.25
CAPN1-205ENST00000526954 ZNF79Q15937 498 aa13.5□□□□□ -0.25
CAPN1-205ENST00000526954 LY6G6FQ5SQ64 297 aa13.5□□□□□ -0.25
CAPN1-205ENST00000526954 STEAP3Q658P3 488 aa13.5□□□□□ -0.25
CAPN1-205ENST00000526954 HCP5Q6MZN7 132 aa13.5□□□□□ -0.25
CAPN1-205ENST00000526954 ZNF782Q6ZMW2 699 aaPredicted RBP13.5□□□□□ -0.25
CAPN1-205ENST00000526954 C5orf24Q7Z6I8 188 aa13.5□□□□□ -0.25
CAPN1-205ENST00000526954 PRR18Q8N4B5 295 aa13.5□□□□□ -0.25
CAPN1-205ENST00000526954 BEST4Q8NFU0 473 aa13.5□□□□□ -0.25
CAPN1-205ENST00000526954 OR52I2Q8NH67 350 aa13.5□□□□□ -0.25
CAPN1-205ENST00000526954 UBALD1Q8TB05 177 aa13.5□□□□□ -0.25
CAPN1-205ENST00000526954 SMIM4Q8WVI0 70 aa13.5□□□□□ -0.25
CAPN1-205ENST00000526954 FCAMRQ8WWV6 532 aa13.5□□□□□ -0.25
CAPN1-205ENST00000526954 IFT46Q9NQC8 304 aa13.5□□□□□ -0.25
CAPN1-205ENST00000526954 MTFP1Q9UDX5 166 aa13.5□□□□□ -0.25
CAPN1-205ENST00000526954 ANXA10Q9UJ72 324 aa13.5□□□□□ -0.25
CAPN1-205ENST00000526954 CENPVL3A0A0U1RRI6 287 aa13.49□□□□□ -0.25
CAPN1-205ENST00000526954 RNASEK-C17orf49H0YIS7 233 aa13.49□□□□□ -0.25
CAPN1-205ENST00000526954 SDCBPO00560 298 aaPredicted RBP13.49□□□□□ -0.25
CAPN1-205ENST00000526954 RCVRNP35243 200 aa13.49□□□□□ -0.25
CAPN1-205ENST00000526954 DLX1P56177 255 aa13.49□□□□□ -0.25
CAPN1-205ENST00000526954 DGCR2P98153 550 aa13.49□□□□□ -0.25
CAPN1-205ENST00000526954 ZNF45Q02386 682 aa13.49□□□□□ -0.25
CAPN1-205ENST00000526954 SSBP1Q04837 148 aaKnown RBP13.49□□□□□ -0.25
CAPN1-205ENST00000526954 HERPUD1Q15011 391 aa13.49□□□□□ -0.25
CAPN1-205ENST00000526954 Q3ZCU0 254 aa13.49□□□□□ -0.25
CAPN1-205ENST00000526954 KLF17Q5JT82 389 aaPredicted RBP13.49□□□□□ -0.25
CAPN1-205ENST00000526954 FAM120AOSQ5T036 256 aa13.49□□□□□ -0.25
CAPN1-205ENST00000526954 OR11H6Q8NGC7 330 aa13.49□□□□□ -0.25
CAPN1-205ENST00000526954 OR13D1Q8NGV5 346 aa13.49□□□□□ -0.25
CAPN1-205ENST00000526954 NANPQ8TBE9 248 aa13.49□□□□□ -0.25
CAPN1-205ENST00000526954 SNAPC3Q92966 411 aa13.49□□□□□ -0.25
CAPN1-205ENST00000526954 CABLES2Q9BTV7 478 aa13.49□□□□□ -0.25
CAPN1-205ENST00000526954 SUCNR1Q9BXA5 334 aa13.49□□□□□ -0.25
CAPN1-205ENST00000526954 OR2S2Q9NQN1 319 aa13.49□□□□□ -0.25
CAPN1-205ENST00000526954 GFOD1Q9NXC2 390 aa13.49□□□□□ -0.25
CAPN1-205ENST00000526954 KLK11Q9UBX7 282 aa13.49□□□□□ -0.25
CAPN1-205ENST00000526954 JPT1Q9UK76 154 aa13.49□□□□□ -0.25
CAPN1-205ENST00000526954 IGHV2-26A0A0B4J1V2 119 aa13.48□□□□□ -0.25
CAPN1-205ENST00000526954 IGKV1-6A0A0C4DH72 117 aa13.48□□□□□ -0.25
CAPN1-205ENST00000526954 MEIS3P1A6NDR6 274 aa13.48□□□□□ -0.25
CAPN1-205ENST00000526954 YPEL1O60688 119 aa13.48□□□□□ -0.25
CAPN1-205ENST00000526954 RBBP9O75884 186 aa13.48□□□□□ -0.25
CAPN1-205ENST00000526954 CTXN2P0C2S0 81 aa13.48□□□□□ -0.25
CAPN1-205ENST00000526954 NFYBP25208 207 aa13.48□□□□□ -0.25
CAPN1-205ENST00000526954 UBE2E1P51965 193 aa13.48□□□□□ -0.25
CAPN1-205ENST00000526954 BPIFB3P59826 476 aa13.48□□□□□ -0.25
CAPN1-205ENST00000526954 LTC4SQ16873 150 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms