RNA–Protein interactions for RNA: ENST00000526869.1

SMCO4-203, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 1 (best)

Gene SMCO4, Length 374 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-203ENST00000526869 VAMP1P23763 118 aa17.07■□□□□ 0.32
SMCO4-203ENST00000526869 CD34P28906 385 aa17.07■□□□□ 0.32
SMCO4-203ENST00000526869 EDDM3AQ14507 147 aa17.07■□□□□ 0.32
SMCO4-203ENST00000526869 ABCA11PQ4W5N1 156 aa17.07■□□□□ 0.32
SMCO4-203ENST00000526869 C5orf24Q7Z6I8 188 aa17.07■□□□□ 0.32
SMCO4-203ENST00000526869 CCDC71LQ8N9Z2 235 aa17.07■□□□□ 0.32
SMCO4-203ENST00000526869 OR13A1Q8NGR1 328 aa17.07■□□□□ 0.32
SMCO4-203ENST00000526869 PHB2Q99623 299 aa17.07■□□□□ 0.32
SMCO4-203ENST00000526869 ZNF436Q9C0F3 470 aaPredicted RBP17.07■□□□□ 0.32
SMCO4-203ENST00000526869 KAAG1Q9UBP8 84 aa17.07■□□□□ 0.32
SMCO4-203ENST00000526869 SMG1Q96Q15 3661 aaKnown RBP17.07■□□□□ 0.32
SMCO4-203ENST00000526869 ABCA4P78363 2273 aa17.07■□□□□ 0.32
SMCO4-203ENST00000526869 HRNRQ86YZ3 2850 aaPredicted RBP17.07■□□□□ 0.32
SMCO4-203ENST00000526869 RAI1Q7Z5J4 1906 aaPredicted RBP17.06■□□□□ 0.32
SMCO4-203ENST00000526869 CRYM-AS1A6NIL9 109 aa17.06■□□□□ 0.32
SMCO4-203ENST00000526869 SPINT2O43291 252 aa17.06■□□□□ 0.32
SMCO4-203ENST00000526869 HBZP02008 142 aa17.06■□□□□ 0.32
SMCO4-203ENST00000526869 HLA-GP17693 338 aa17.06■□□□□ 0.32
SMCO4-203ENST00000526869 PI3P19957 117 aa17.06■□□□□ 0.32
SMCO4-203ENST00000526869 IL2RGP31785 369 aa17.06■□□□□ 0.32
SMCO4-203ENST00000526869 RND3P61587 244 aa17.06■□□□□ 0.32
SMCO4-203ENST00000526869 SUPT4H1P63272 117 aaKnown RBP17.06■□□□□ 0.32
SMCO4-203ENST00000526869 HTD2P86397 168 aa17.06■□□□□ 0.32
SMCO4-203ENST00000526869 SGPP2Q8IWX5 399 aa17.06■□□□□ 0.32
SMCO4-203ENST00000526869 ZNF565Q8N9K5 539 aa17.06■□□□□ 0.32
SMCO4-203ENST00000526869 MRGPRDQ8TDS7 321 aa17.06■□□□□ 0.32
SMCO4-203ENST00000526869 FAM216AQ8WUB2 273 aa17.06■□□□□ 0.32
SMCO4-203ENST00000526869 IL1F10Q8WWZ1 152 aa17.06■□□□□ 0.32
SMCO4-203ENST00000526869 FYTTD1Q96QD9 318 aaKnown RBP17.06■□□□□ 0.32
SMCO4-203ENST00000526869 USP9XQ93008 2570 aaPredicted RBP17.05■□□□□ 0.32
SMCO4-203ENST00000526869 DSCAMO60469 2012 aa17.05■□□□□ 0.32
SMCO4-203ENST00000526869 C15orf65H3BRN8 121 aa17.05■□□□□ 0.32
SMCO4-203ENST00000526869 RP2O75695 350 aa17.05■□□□□ 0.32
SMCO4-203ENST00000526869 OR2A4O95047 310 aa17.05■□□□□ 0.32
SMCO4-203ENST00000526869 GIPP09681 153 aaPredicted RBP17.05■□□□□ 0.32
SMCO4-203ENST00000526869 ZFP69Q49AA0 526 aa17.05■□□□□ 0.32
SMCO4-203ENST00000526869 CLEC18BQ6UXF7 455 aa17.05■□□□□ 0.32
SMCO4-203ENST00000526869 FAM216BQ8N7L0 139 aa17.05■□□□□ 0.32
SMCO4-203ENST00000526869 OR1L1Q8NH94 360 aa17.05■□□□□ 0.32
SMCO4-203ENST00000526869 OR2A7Q96R45 310 aa17.05■□□□□ 0.32
SMCO4-203ENST00000526869 SLC5A7Q9GZV3 580 aa17.05■□□□□ 0.32
SMCO4-203ENST00000526869 SLC2A9Q9NRM0 540 aa17.05■□□□□ 0.32
SMCO4-203ENST00000526869 OR1A1Q9P1Q5 309 aa17.05■□□□□ 0.32
SMCO4-203ENST00000526869 HSPA12AO43301 675 aa17.04■□□□□ 0.32
SMCO4-203ENST00000526869 C1QBP02746 253 aa17.04■□□□□ 0.32
SMCO4-203ENST00000526869 SELLP14151 372 aa17.04■□□□□ 0.32
SMCO4-203ENST00000526869 EIF2B2P49770 351 aaKnown RBP17.04■□□□□ 0.32
SMCO4-203ENST00000526869 PIGPP57054 158 aa17.04■□□□□ 0.32
SMCO4-203ENST00000526869 RAP2BP61225 183 aa17.04■□□□□ 0.32
SMCO4-203ENST00000526869 TMEM30BQ3MIR4 351 aa17.04■□□□□ 0.32
SMCO4-203ENST00000526869 TPRX1Q8N7U7 411 aa17.04■□□□□ 0.32
SMCO4-203ENST00000526869 COQ8AQ8NI60 647 aa17.04■□□□□ 0.32
SMCO4-203ENST00000526869 CORO2AQ92828 525 aa17.04■□□□□ 0.32
SMCO4-203ENST00000526869 ARL11Q969Q4 196 aa17.04■□□□□ 0.32
SMCO4-203ENST00000526869 GALNT14Q96FL9 552 aa17.04■□□□□ 0.32
SMCO4-203ENST00000526869 NAA60Q9H7X0 242 aa17.04■□□□□ 0.32
SMCO4-203ENST00000526869 UBTD1Q9HAC8 227 aa17.04■□□□□ 0.32
SMCO4-203ENST00000526869 LPAR3Q9UBY5 353 aa17.04■□□□□ 0.32
SMCO4-203ENST00000526869 IGKV1D-13A0A0B4J2D9 117 aa17.03■□□□□ 0.32
SMCO4-203ENST00000526869 TEX13DA0A0J9YY54 714 aaPredicted RBP17.03■□□□□ 0.32
SMCO4-203ENST00000526869 A0A1B0GW55 424 aa17.03■□□□□ 0.32
SMCO4-203ENST00000526869 DBX1A6NMT0 343 aa17.03■□□□□ 0.32
SMCO4-203ENST00000526869 F2RL2O00254 374 aa17.03■□□□□ 0.32
SMCO4-203ENST00000526869 GPR31O00270 319 aa17.03■□□□□ 0.32
SMCO4-203ENST00000526869 TMPRSS2O15393 492 aa17.03■□□□□ 0.32
SMCO4-203ENST00000526869 SLC22A5O76082 557 aa17.03■□□□□ 0.32
SMCO4-203ENST00000526869 IFNA2P01563 188 aa17.03■□□□□ 0.32
SMCO4-203ENST00000526869 DUX4L2P0CJ85 424 aa17.03■□□□□ 0.32
SMCO4-203ENST00000526869 DUX4L3P0CJ86 424 aa17.03■□□□□ 0.32
SMCO4-203ENST00000526869 DUX4L4P0CJ87 422 aa17.03■□□□□ 0.32
SMCO4-203ENST00000526869 DUX4L5P0CJ88 424 aa17.03■□□□□ 0.32
SMCO4-203ENST00000526869 DUX4L6P0CJ89 424 aa17.03■□□□□ 0.32
SMCO4-203ENST00000526869 DUX4L7P0CJ90 424 aa17.03■□□□□ 0.32
SMCO4-203ENST00000526869 RNF224P0DH78 156 aa17.03■□□□□ 0.32
SMCO4-203ENST00000526869 CGB3P0DN86 165 aa17.03■□□□□ 0.32
SMCO4-203ENST00000526869 CGB7P0DN87 165 aa17.03■□□□□ 0.32
SMCO4-203ENST00000526869 IGKV1-13P0DP09 117 aa17.03■□□□□ 0.32
SMCO4-203ENST00000526869 GNRHRP30968 328 aa17.03■□□□□ 0.32
SMCO4-203ENST00000526869 LUMP51884 338 aaPredicted RBP17.03■□□□□ 0.32
SMCO4-203ENST00000526869 EDDM3BP56851 147 aa17.03■□□□□ 0.32
SMCO4-203ENST00000526869 TLE4Q04727 773 aa17.03■□□□□ 0.32
SMCO4-203ENST00000526869 MEF2CQ06413 473 aaPredicted RBP17.03■□□□□ 0.32
SMCO4-203ENST00000526869 DUX4L9Q6RFH8 374 aaPredicted RBP17.03■□□□□ 0.32
SMCO4-203ENST00000526869 LDLRAD3Q86YD5 345 aa17.03■□□□□ 0.32
SMCO4-203ENST00000526869 PRR18Q8N4B5 295 aa17.03■□□□□ 0.32
SMCO4-203ENST00000526869 OR10V1Q8NGI7 309 aa17.03■□□□□ 0.32
SMCO4-203ENST00000526869 CASTOR1Q8WTX7 329 aa17.03■□□□□ 0.32
SMCO4-203ENST00000526869 SECTM1Q8WVN6 248 aa17.03■□□□□ 0.32
SMCO4-203ENST00000526869 RTN4IP1Q8WWV3 396 aaPredicted RBP17.03■□□□□ 0.32
SMCO4-203ENST00000526869 DMRTB1Q96MA1 342 aa17.03■□□□□ 0.32
SMCO4-203ENST00000526869 TMEM246Q9BRR3 403 aa17.03■□□□□ 0.32
SMCO4-203ENST00000526869 RDH8Q9NYR8 311 aa17.03■□□□□ 0.32
SMCO4-203ENST00000526869 DUX4Q9UBX2 424 aa17.03■□□□□ 0.32
SMCO4-203ENST00000526869 KCNIP3Q9Y2W7 256 aa17.03■□□□□ 0.32
SMCO4-203ENST00000526869 TRGV10A0A0A0MS01 117 aa17.02■□□□□ 0.32
SMCO4-203ENST00000526869 ADAM20O43506 726 aa17.02■□□□□ 0.32
SMCO4-203ENST00000526869 IGHV2-70P01814 119 aa17.02■□□□□ 0.32
SMCO4-203ENST00000526869 WNT2P09544 360 aa17.02■□□□□ 0.32
SMCO4-203ENST00000526869 COL8A2P25067 703 aa17.02■□□□□ 0.32
SMCO4-203ENST00000526869 S100GP29377 79 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms