RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 PARP11Q9NR21 331 aa12.04□□□□□ -0.48
LRRK1-202ENST00000525284 NDUFB4O95168 129 aa12.04□□□□□ -0.48
LRRK1-202ENST00000525284 NXPH1P58417 271 aa12.04□□□□□ -0.48
LRRK1-202ENST00000525284 OR4D5Q8NGN0 318 aa12.04□□□□□ -0.48
LRRK1-202ENST00000525284 ANAPC13Q9BS18 74 aa12.04□□□□□ -0.48
LRRK1-202ENST00000525284 LPAR2Q9HBW0 351 aa12.04□□□□□ -0.48
LRRK1-202ENST00000525284 CXCL3P19876 107 aa12.04□□□□□ -0.48
LRRK1-202ENST00000525284 PRDX2P32119 198 aa12.04□□□□□ -0.48
LRRK1-202ENST00000525284 FAM74A4Q5TZK3 123 aa12.04□□□□□ -0.48
LRRK1-202ENST00000525284 TMEM108Q6UXF1 575 aa12.04□□□□□ -0.48
LRRK1-202ENST00000525284 PRNDQ9UKY0 176 aa12.04□□□□□ -0.48
LRRK1-202ENST00000525284 TIAM2Q8IVF5 1701 aa12.04□□□□□ -0.48
LRRK1-202ENST00000525284 TRAV12-3A0A0B4J271 114 aa12.04□□□□□ -0.48
LRRK1-202ENST00000525284 FFAR1O14842 300 aa12.04□□□□□ -0.48
LRRK1-202ENST00000525284 RCC1P18754 421 aaPredicted RBP12.04□□□□□ -0.48
LRRK1-202ENST00000525284 ZNF793Q6ZN11 406 aa12.04□□□□□ -0.48
LRRK1-202ENST00000525284 PHOSPHO2Q8TCD6 241 aa12.04□□□□□ -0.48
LRRK1-202ENST00000525284 SYT11Q9BT88 431 aa12.04□□□□□ -0.48
LRRK1-202ENST00000525284 METTL1Q9UBP6 276 aaKnown RBP12.04□□□□□ -0.48
LRRK1-202ENST00000525284 HAX1O00165 279 aa12.04□□□□□ -0.48
LRRK1-202ENST00000525284 LYZL2Q7Z4W2 148 aa12.04□□□□□ -0.48
LRRK1-202ENST00000525284 ZNF275Q9NSD4 429 aaPredicted RBP12.04□□□□□ -0.48
LRRK1-202ENST00000525284 TRAV38-1A0A0B4J264 116 aa12.03□□□□□ -0.48
LRRK1-202ENST00000525284 KLK10O43240 276 aa12.03□□□□□ -0.48
LRRK1-202ENST00000525284 PLPP2O43688 288 aa12.03□□□□□ -0.48
LRRK1-202ENST00000525284 UBALD2Q8IYN6 164 aa12.03□□□□□ -0.48
LRRK1-202ENST00000525284 SLC25A40Q8TBP6 338 aa12.03□□□□□ -0.48
LRRK1-202ENST00000525284 C4orf45Q96LM5 186 aa12.03□□□□□ -0.48
LRRK1-202ENST00000525284 MARVELD1Q9BSK0 173 aa12.03□□□□□ -0.48
LRRK1-202ENST00000525284 MTCH2Q9Y6C9 303 aa12.03□□□□□ -0.48
LRRK1-202ENST00000525284 A1L4Q6 167 aa12.03□□□□□ -0.48
LRRK1-202ENST00000525284 MYF5P13349 255 aa12.03□□□□□ -0.48
LRRK1-202ENST00000525284 CTAG1AP78358 180 aa12.03□□□□□ -0.48
LRRK1-202ENST00000525284 OR10AC1Q8NH08 325 aa12.03□□□□□ -0.48
LRRK1-202ENST00000525284 GNRHR2Q96P88 292 aa12.03□□□□□ -0.48
LRRK1-202ENST00000525284 RBKSQ9H477 322 aa12.03□□□□□ -0.48
LRRK1-202ENST00000525284 ASB1Q9Y576 335 aa12.03□□□□□ -0.48
LRRK1-202ENST00000525284 TRAV8-2A0A0B4J237 113 aa12.03□□□□□ -0.48
LRRK1-202ENST00000525284 SNAI2O43623 268 aa12.03□□□□□ -0.48
LRRK1-202ENST00000525284 CYB5R3P00387 301 aaPredicted RBP12.03□□□□□ -0.48
LRRK1-202ENST00000525284 ADAD2Q8NCV1 583 aaKnown RBP12.03□□□□□ -0.48
LRRK1-202ENST00000525284 RARRES2Q99969 163 aa12.03□□□□□ -0.48
LRRK1-202ENST00000525284 NEU3Q9UQ49 428 aa12.03□□□□□ -0.48
LRRK1-202ENST00000525284 KCNK7Q9Y2U2 307 aa12.03□□□□□ -0.48
LRRK1-202ENST00000525284 AMY1AP04745 511 aa12.03□□□□□ -0.48
LRRK1-202ENST00000525284 FZD5Q13467 585 aa12.03□□□□□ -0.48
LRRK1-202ENST00000525284 TMEM170BQ5T4T1 132 aa12.03□□□□□ -0.48
LRRK1-202ENST00000525284 MBNL2Q5VZF2 373 aaKnown RBP12.03□□□□□ -0.48
LRRK1-202ENST00000525284 OR10AG1Q8NH19 301 aa12.03□□□□□ -0.48
LRRK1-202ENST00000525284 LHFPL5Q8TAF8 219 aa12.03□□□□□ -0.48
LRRK1-202ENST00000525284 PRSS27Q9BQR3 290 aa12.03□□□□□ -0.48
LRRK1-202ENST00000525284 GHITMQ9H3K2 345 aa12.03□□□□□ -0.48
LRRK1-202ENST00000525284 SIGLEC5O15389 551 aa12.03□□□□□ -0.48
LRRK1-202ENST00000525284 REG1BP48304 166 aa12.03□□□□□ -0.48
LRRK1-202ENST00000525284 GFERP55789 205 aa12.03□□□□□ -0.48
LRRK1-202ENST00000525284 SUMO3P55854 103 aaPredicted RBP12.03□□□□□ -0.48
LRRK1-202ENST00000525284 SIGLEC14Q08ET2 396 aa12.03□□□□□ -0.48
LRRK1-202ENST00000525284 FXYD3Q14802 87 aa12.03□□□□□ -0.48
LRRK1-202ENST00000525284 WFDC5Q8TCV5 224 aa12.03□□□□□ -0.48
LRRK1-202ENST00000525284 ABHD14BQ96IU4 210 aa12.03□□□□□ -0.48
LRRK1-202ENST00000525284 C12orf73Q69YU5 71 aa12.02□□□□□ -0.48
LRRK1-202ENST00000525284 SH2D5Q6ZV89 423 aa12.02□□□□□ -0.48
LRRK1-202ENST00000525284 GPR82Q96P67 336 aa12.02□□□□□ -0.48
LRRK1-202ENST00000525284 CLDN16Q9Y5I7 305 aa12.02□□□□□ -0.48
LRRK1-202ENST00000525284 OR51B2Q9Y5P1 312 aa12.02□□□□□ -0.48
LRRK1-202ENST00000525284 IGKV6D-21A0A0A0MT36 114 aa12.02□□□□□ -0.49
LRRK1-202ENST00000525284 HYPMO75409 117 aa12.02□□□□□ -0.49
LRRK1-202ENST00000525284 MPZL1O95297 269 aa12.02□□□□□ -0.49
LRRK1-202ENST00000525284 ATP6V0CP27449 155 aa12.02□□□□□ -0.49
LRRK1-202ENST00000525284 HYAL1Q12794 435 aa12.02□□□□□ -0.49
LRRK1-202ENST00000525284 BIVMQ86UB2 503 aa12.02□□□□□ -0.49
LRRK1-202ENST00000525284 RNPS1Q15287 305 aaKnown RBP12.02□□□□□ -0.49
LRRK1-202ENST00000525284 ZNF56Q15929 161 aa12.02□□□□□ -0.49
LRRK1-202ENST00000525284 IL36RNQ9UBH0 155 aa12.02□□□□□ -0.49
LRRK1-202ENST00000525284 PSG2P11465 335 aa12.02□□□□□ -0.49
LRRK1-202ENST00000525284 FAM209AQ5JX71 171 aa12.02□□□□□ -0.49
LRRK1-202ENST00000525284 C9orf62Q8N4C0 152 aa12.02□□□□□ -0.49
LRRK1-202ENST00000525284 OR1L8Q8NGR8 309 aa12.02□□□□□ -0.49
LRRK1-202ENST00000525284 ZNF71Q9NQZ8 489 aaPredicted RBP12.02□□□□□ -0.49
LRRK1-202ENST00000525284 SOCS1O15524 211 aa12.02□□□□□ -0.49
LRRK1-202ENST00000525284 ETHE1O95571 254 aa12.02□□□□□ -0.49
LRRK1-202ENST00000525284 VDAC1P21796 283 aa12.02□□□□□ -0.49
LRRK1-202ENST00000525284 ANOS1P23352 680 aa12.02□□□□□ -0.49
LRRK1-202ENST00000525284 SSTR5P35346 364 aa12.02□□□□□ -0.49
LRRK1-202ENST00000525284 HIST1H1AQ02539 215 aaPredicted RBP12.02□□□□□ -0.49
LRRK1-202ENST00000525284 KIAA1644Q3SXP7 199 aa12.02□□□□□ -0.49
LRRK1-202ENST00000525284 RND1Q92730 232 aa12.02□□□□□ -0.49
LRRK1-202ENST00000525284 ABHD1Q96SE0 405 aa12.02□□□□□ -0.49
LRRK1-202ENST00000525284 TRBV7-9A0A0J9YWB2 115 aa12.01□□□□□ -0.49
LRRK1-202ENST00000525284 SRIP30626 198 aa12.01□□□□□ -0.49
LRRK1-202ENST00000525284 ID4P47928 161 aa12.01□□□□□ -0.49
LRRK1-202ENST00000525284 MMDQ15546 238 aa12.01□□□□□ -0.49
LRRK1-202ENST00000525284 OR5AN1Q8NGI8 311 aa12.01□□□□□ -0.49
LRRK1-202ENST00000525284 TAF1P21675 1872 aa12.01□□□□□ -0.49
LRRK1-202ENST00000525284 LOXHD1Q8IVV2 1947 aa12.01□□□□□ -0.49
LRRK1-202ENST00000525284 A0A1B0GU03 582 aa12.01□□□□□ -0.49
LRRK1-202ENST00000525284 A0A1W2PPE3 182 aa12.01□□□□□ -0.49
LRRK1-202ENST00000525284 J3QR06 171 aa12.01□□□□□ -0.49
LRRK1-202ENST00000525284 MT-ND6P03923 174 aa12.01□□□□□ -0.49
LRRK1-202ENST00000525284 THSD4Q6ZMP0 1018 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms