RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 SNX29P2Q8IUI4 249 aa5.29□□□□□ -1.56
CD44-214ENST00000525211 DYNAPQ8N1N2 210 aa5.29□□□□□ -1.56
CD44-214ENST00000525211 OR4M2Q8NGB6 313 aa5.29□□□□□ -1.56
CD44-214ENST00000525211 OR52L2PQ8NGH6 319 aa5.29□□□□□ -1.56
CD44-214ENST00000525211 OR56B1Q8NGI3 324 aa5.29□□□□□ -1.56
CD44-214ENST00000525211 OR5D13Q8NGL4 314 aa5.29□□□□□ -1.56
CD44-214ENST00000525211 OR6Q1Q8NGQ2 317 aa5.29□□□□□ -1.56
CD44-214ENST00000525211 CREB3L1Q96BA8 519 aa5.29□□□□□ -1.56
CD44-214ENST00000525211 WDFY2Q96P53 400 aa5.29□□□□□ -1.56
CD44-214ENST00000525211 SDHCQ99643 169 aaPredicted RBP5.29□□□□□ -1.56
CD44-214ENST00000525211 CMSS1Q9BQ75 279 aaKnown RBP5.29□□□□□ -1.56
CD44-214ENST00000525211 PCGF1Q9BSM1 259 aa5.29□□□□□ -1.56
CD44-214ENST00000525211 C6orf62Q9GZU0 229 aaPredicted RBP5.29□□□□□ -1.56
CD44-214ENST00000525211 Q9N2K0 584 aa5.29□□□□□ -1.56
CD44-214ENST00000525211 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.29□□□□□ -1.56
CD44-214ENST00000525211 MBNL3Q9NUK0 354 aaKnown RBP5.29□□□□□ -1.56
CD44-214ENST00000525211 CALYQ9NYX4 217 aa5.29□□□□□ -1.56
CD44-214ENST00000525211 OR1A1Q9P1Q5 309 aa5.29□□□□□ -1.56
CD44-214ENST00000525211 EXTL2Q9UBQ6 330 aa5.29□□□□□ -1.56
CD44-214ENST00000525211 PFDN2Q9UHV9 154 aa5.29□□□□□ -1.56
CD44-214ENST00000525211 GLS2Q9UI32 602 aa5.29□□□□□ -1.56
CD44-214ENST00000525211 HSF4Q9ULV5 492 aa5.29□□□□□ -1.56
CD44-214ENST00000525211 MRPS7Q9Y2R9 242 aaKnown RBP5.29□□□□□ -1.56
CD44-214ENST00000525211 V9GYH0 126 aa5.29□□□□□ -1.56
CD44-214ENST00000525211 CUBNO60494 3623 aa5.29□□□□□ -1.56
CD44-214ENST00000525211 TRBV6-6A0A0A6YYG2 114 aa5.28□□□□□ -1.56
CD44-214ENST00000525211 CENPVL3A0A0U1RRI6 287 aa5.28□□□□□ -1.56
CD44-214ENST00000525211 TMEM30CPA0ZSE6 113 aa5.28□□□□□ -1.56
CD44-214ENST00000525211 NPIPB11E5RHQ5 1161 aa5.28□□□□□ -1.56
CD44-214ENST00000525211 RGS5O15539 181 aa5.28□□□□□ -1.56
CD44-214ENST00000525211 ENSAO43768 121 aaKnown RBP5.28□□□□□ -1.56
CD44-214ENST00000525211 HBZP02008 142 aa5.28□□□□□ -1.56
CD44-214ENST00000525211 GLAP06280 429 aa5.28□□□□□ -1.56
CD44-214ENST00000525211 LIPFP07098 398 aa5.28□□□□□ -1.56
CD44-214ENST00000525211 ZNF728P0DKX0 622 aa5.28□□□□□ -1.56
CD44-214ENST00000525211 IGHV1-8P0DP01 117 aa5.28□□□□□ -1.56
CD44-214ENST00000525211 COX7A1P24310 79 aa5.28□□□□□ -1.56
CD44-214ENST00000525211 ADMP35318 185 aa5.28□□□□□ -1.56
CD44-214ENST00000525211 NPY4RP50391 375 aa5.28□□□□□ -1.56
CD44-214ENST00000525211 ZNF134P52741 427 aa5.28□□□□□ -1.56
CD44-214ENST00000525211 SCAND1P57086 179 aa5.28□□□□□ -1.56
CD44-214ENST00000525211 LOXL3P58215 753 aa5.28□□□□□ -1.56
CD44-214ENST00000525211 PAX5Q02548 391 aa5.28□□□□□ -1.56
CD44-214ENST00000525211 MEF2CQ06413 473 aaPredicted RBP5.28□□□□□ -1.56
CD44-214ENST00000525211 DYNC1I2Q13409 638 aaKnown RBP5.28□□□□□ -1.56
CD44-214ENST00000525211 DIAPH2-AS1Q14236 149 aa5.28□□□□□ -1.56
CD44-214ENST00000525211 HMGN3Q15651 99 aa5.28□□□□□ -1.56
CD44-214ENST00000525211 IGSF11Q5DX21 431 aa5.28□□□□□ -1.56
CD44-214ENST00000525211 HACD4Q5VWC8 232 aa5.28□□□□□ -1.56
CD44-214ENST00000525211 BRD3OSQ6XYD6 125 aa5.28□□□□□ -1.56
CD44-214ENST00000525211 LHFPL4Q7Z7J7 247 aa5.28□□□□□ -1.56
CD44-214ENST00000525211 CCDC190Q86UF4 302 aa5.28□□□□□ -1.56
CD44-214ENST00000525211 GLCCI1Q86VQ1 547 aa5.28□□□□□ -1.56
CD44-214ENST00000525211 LYSMD2Q8IV50 215 aa5.28□□□□□ -1.56
CD44-214ENST00000525211 CROCCP3Q8IVE0 287 aa5.28□□□□□ -1.56
CD44-214ENST00000525211 MFSD4AQ8N468 514 aa5.28□□□□□ -1.56
CD44-214ENST00000525211 PRR18Q8N4B5 295 aa5.28□□□□□ -1.56
CD44-214ENST00000525211 OR10V1Q8NGI7 309 aa5.28□□□□□ -1.56
CD44-214ENST00000525211 OR52I2Q8NH67 350 aa5.28□□□□□ -1.56
CD44-214ENST00000525211 SETD6Q8TBK2 473 aa5.28□□□□□ -1.56
CD44-214ENST00000525211 ACOT12Q8WYK0 555 aa5.28□□□□□ -1.56
CD44-214ENST00000525211 C22orf15Q8WYQ4 148 aa5.28□□□□□ -1.56
CD44-214ENST00000525211 SNAPC3Q92966 411 aa5.28□□□□□ -1.56
CD44-214ENST00000525211 LHX4Q969G2 390 aa5.28□□□□□ -1.56
CD44-214ENST00000525211 ARL11Q969Q4 196 aa5.28□□□□□ -1.56
CD44-214ENST00000525211 C5orf30Q96GV9 206 aa5.28□□□□□ -1.56
CD44-214ENST00000525211 KIRREL1Q96J84 757 aa5.28□□□□□ -1.56
CD44-214ENST00000525211 ZNF48Q96MX3 618 aaPredicted RBP5.28□□□□□ -1.56
CD44-214ENST00000525211 ST6GALNAC5Q9BVH7 336 aa5.28□□□□□ -1.56
CD44-214ENST00000525211 SUCNR1Q9BXA5 334 aa5.28□□□□□ -1.56
CD44-214ENST00000525211 C7orf69Q9H7B7 122 aa5.28□□□□□ -1.56
CD44-214ENST00000525211 TAF9BQ9HBM6 251 aa5.28□□□□□ -1.56
CD44-214ENST00000525211 ZNF286AQ9HBT8 521 aa5.28□□□□□ -1.56
CD44-214ENST00000525211 PCDHB16Q9NRJ7 776 aa5.28□□□□□ -1.56
CD44-214ENST00000525211 NDUFA13Q9P0J0 144 aa5.28□□□□□ -1.56
CD44-214ENST00000525211 ZNF69Q9UC07 566 aa5.28□□□□□ -1.56
CD44-214ENST00000525211 TRAPPC2LQ9UL33 140 aa5.28□□□□□ -1.56
CD44-214ENST00000525211 ANAPC10Q9UM13 185 aa5.28□□□□□ -1.56
CD44-214ENST00000525211 AUP1Q9Y679 476 aa5.28□□□□□ -1.56
CD44-214ENST00000525211 LINC00312Q9Y6C7 94 aa5.28□□□□□ -1.56
CD44-214ENST00000525211 TRBV23-1A0A0A0MS06 115 aa5.27□□□□□ -1.57
CD44-214ENST00000525211 TRAV40A0A0B4J280 105 aa5.27□□□□□ -1.57
CD44-214ENST00000525211 KBTBD11-OT1A0A1B0GTJ5 212 aa5.27□□□□□ -1.57
CD44-214ENST00000525211 hADV38S2A0JD32 116 aa5.27□□□□□ -1.57
CD44-214ENST00000525211 METTL21EPA6NDL7 271 aa5.27□□□□□ -1.57
CD44-214ENST00000525211 A8MV72 311 aaPredicted RBP5.27□□□□□ -1.57
CD44-214ENST00000525211 TOX4O94842 621 aa5.27□□□□□ -1.57
CD44-214ENST00000525211 ECDO95905 644 aaPredicted RBP5.27□□□□□ -1.57
CD44-214ENST00000525211 FOSL1P15407 271 aa5.27□□□□□ -1.57
CD44-214ENST00000525211 NFYBP25208 207 aa5.27□□□□□ -1.57
CD44-214ENST00000525211 SOX6P35712 828 aa5.27□□□□□ -1.57
CD44-214ENST00000525211 PPP1CCP36873 323 aaKnown RBP5.27□□□□□ -1.57
CD44-214ENST00000525211 GNG10P50151 68 aa5.27□□□□□ -1.57
CD44-214ENST00000525211 RIPPLY3P57055 190 aa5.27□□□□□ -1.57
CD44-214ENST00000525211 LINC00205P59089 165 aa5.27□□□□□ -1.57
CD44-214ENST00000525211 TMEM69Q5SWH9 247 aa5.27□□□□□ -1.57
CD44-214ENST00000525211 FAM120AOSQ5T036 256 aa5.27□□□□□ -1.57
CD44-214ENST00000525211 CD276Q5ZPR3 534 aa5.27□□□□□ -1.57
CD44-214ENST00000525211 MZT2AQ6P582 158 aa5.27□□□□□ -1.57
CD44-214ENST00000525211 TRAPPC6BQ86SZ2 158 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms