RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 LYPD6Q86Y78 171 aa14.78□□□□□ -0.04
CAPN1-203ENST00000525013 GFOD1Q9NXC2 390 aa14.78□□□□□ -0.04
CAPN1-203ENST00000525013 UBE2QL1A1L167 161 aa14.77□□□□□ -0.05
CAPN1-203ENST00000525013 FAM90A10PA6NDY2 464 aa14.77□□□□□ -0.05
CAPN1-203ENST00000525013 FAM90A7PA6NKC0 464 aa14.77□□□□□ -0.05
CAPN1-203ENST00000525013 ADARB2-AS1A8MUL3 147 aa14.77□□□□□ -0.05
CAPN1-203ENST00000525013 FAM90A23PA8MXZ1 464 aa14.77□□□□□ -0.05
CAPN1-203ENST00000525013 C12orf77C9JDV5 145 aa14.77□□□□□ -0.05
CAPN1-203ENST00000525013 G3V4G9 280 aa14.77□□□□□ -0.05
CAPN1-203ENST00000525013 HSD17B6O14756 317 aa14.77□□□□□ -0.05
CAPN1-203ENST00000525013 GAPDHP04406 335 aaKnown RBP14.77□□□□□ -0.05
CAPN1-203ENST00000525013 REG1BP48304 166 aa14.77□□□□□ -0.05
CAPN1-203ENST00000525013 LOXL3P58215 753 aa14.77□□□□□ -0.05
CAPN1-203ENST00000525013 RBM48Q5RL73 367 aaKnown RBP14.77□□□□□ -0.05
CAPN1-203ENST00000525013 C6orf183Q5T699 404 aa14.77□□□□□ -0.05
CAPN1-203ENST00000525013 FAM53AQ6NSI3 398 aaPredicted RBP14.77□□□□□ -0.05
CAPN1-203ENST00000525013 UNQ9370/PRO34162Q6UXP9 181 aa14.77□□□□□ -0.05
CAPN1-203ENST00000525013 CEACAM19Q7Z692 300 aa14.77□□□□□ -0.05
CAPN1-203ENST00000525013 PRR18Q8N4B5 295 aa14.77□□□□□ -0.05
CAPN1-203ENST00000525013 Q96M66 194 aa14.77□□□□□ -0.05
CAPN1-203ENST00000525013 CST11Q9H112 138 aa14.77□□□□□ -0.05
CAPN1-203ENST00000525013 RAB9BQ9NP90 201 aa14.77□□□□□ -0.05
CAPN1-203ENST00000525013 GNG12Q9UBI6 72 aa14.77□□□□□ -0.05
CAPN1-203ENST00000525013 LSM2Q9Y333 95 aaKnown RBP14.77□□□□□ -0.05
CAPN1-203ENST00000525013 TPRKBQ9Y3C4 175 aa14.77□□□□□ -0.05
CAPN1-203ENST00000525013 TCRBV4S1A1TA0A5B7 111 aa14.76□□□□□ -0.05
CAPN1-203ENST00000525013 MPIG6BO95866 241 aa14.76□□□□□ -0.05
CAPN1-203ENST00000525013 IGKV1D-33P01593 117 aa14.76□□□□□ -0.05
CAPN1-203ENST00000525013 IGKV1-33P01594 117 aa14.76□□□□□ -0.05
CAPN1-203ENST00000525013 IL3RAP26951 378 aa14.76□□□□□ -0.05
CAPN1-203ENST00000525013 SLC35A2P78381 396 aa14.76□□□□□ -0.05
CAPN1-203ENST00000525013 CD83Q01151 205 aa14.76□□□□□ -0.05
CAPN1-203ENST00000525013 NKAPLQ5M9Q1 402 aa14.76□□□□□ -0.05
CAPN1-203ENST00000525013 LIPKQ5VXJ0 399 aa14.76□□□□□ -0.05
CAPN1-203ENST00000525013 GLT8D1Q68CQ7 371 aa14.76□□□□□ -0.05
CAPN1-203ENST00000525013 GHRLQ9UBU3 117 aa14.76□□□□□ -0.05
CAPN1-203ENST00000525013 IGHV3-72A0A0B4J1Y9 119 aa14.75□□□□□ -0.05
CAPN1-203ENST00000525013 IGHV1-3A0A0C4DH29 117 aa14.75□□□□□ -0.05
CAPN1-203ENST00000525013 CA11O75493 328 aa14.75□□□□□ -0.05
CAPN1-203ENST00000525013 HBZP02008 142 aa14.75□□□□□ -0.05
CAPN1-203ENST00000525013 GLAP06280 429 aa14.75□□□□□ -0.05
CAPN1-203ENST00000525013 UBBP0CG47 229 aa14.75□□□□□ -0.05
CAPN1-203ENST00000525013 HSMCR30P0CW71 290 aa14.75□□□□□ -0.05
CAPN1-203ENST00000525013 RCC1P18754 421 aaPredicted RBP14.75□□□□□ -0.05
CAPN1-203ENST00000525013 GP2P55259 537 aaKnown RBP14.75□□□□□ -0.05
CAPN1-203ENST00000525013 ZNF816Q0VGE8 651 aaPredicted RBP14.75□□□□□ -0.05
CAPN1-203ENST00000525013 HSD17B12Q53GQ0 312 aa14.75□□□□□ -0.05
CAPN1-203ENST00000525013 KHDC1LQ5JSQ8 128 aa14.75□□□□□ -0.05
CAPN1-203ENST00000525013 SIGIRRQ6IA17 410 aa14.75□□□□□ -0.05
CAPN1-203ENST00000525013 OR10K2Q6IF99 312 aa14.75□□□□□ -0.05
CAPN1-203ENST00000525013 LRRTM1Q86UE6 522 aa14.75□□□□□ -0.05
CAPN1-203ENST00000525013 LINC00311Q8N616 119 aa14.75□□□□□ -0.05
CAPN1-203ENST00000525013 OR4X2Q8NGF9 303 aa14.75□□□□□ -0.05
CAPN1-203ENST00000525013 OR10V1Q8NGI7 309 aa14.75□□□□□ -0.05
CAPN1-203ENST00000525013 OR1L1Q8NH94 360 aa14.75□□□□□ -0.05
CAPN1-203ENST00000525013 PHYHIPQ92561 330 aa14.75□□□□□ -0.05
CAPN1-203ENST00000525013 UFD1Q92890 307 aa14.75□□□□□ -0.05
CAPN1-203ENST00000525013 TMEM203Q969S6 136 aa14.75□□□□□ -0.05
CAPN1-203ENST00000525013 CCDC90BQ9GZT6 254 aa14.75□□□□□ -0.05
CAPN1-203ENST00000525013 RGS10O43665 173 aa14.74□□□□□ -0.05
CAPN1-203ENST00000525013 PDCD6O75340 191 aa14.74□□□□□ -0.05
CAPN1-203ENST00000525013 PF4V1P10720 104 aa14.74□□□□□ -0.05
CAPN1-203ENST00000525013 SRMP19623 302 aa14.74□□□□□ -0.05
CAPN1-203ENST00000525013 MYF6P23409 242 aa14.74□□□□□ -0.05
CAPN1-203ENST00000525013 IRF3Q14653 427 aa14.74□□□□□ -0.05
CAPN1-203ENST00000525013 TCTEX1D4Q5JR98 221 aa14.74□□□□□ -0.05
CAPN1-203ENST00000525013 TRAT1Q6PIZ9 186 aa14.74□□□□□ -0.05
CAPN1-203ENST00000525013 C10orf99Q6UWK7 81 aa14.74□□□□□ -0.05
CAPN1-203ENST00000525013 C8orf31Q8N9H6 132 aa14.74□□□□□ -0.05
CAPN1-203ENST00000525013 CYYR1Q96J86 154 aa14.74□□□□□ -0.05
CAPN1-203ENST00000525013 NEDD4LQ96PU5 975 aa14.74□□□□□ -0.05
CAPN1-203ENST00000525013 VCX3BQ9H321 246 aa14.74□□□□□ -0.05
CAPN1-203ENST00000525013 KCNIP1Q9NZI2 227 aa14.74□□□□□ -0.05
CAPN1-203ENST00000525013 ERICH4A6NGS2 130 aa14.73□□□□□ -0.05
CAPN1-203ENST00000525013 SLC31A2O15432 143 aa14.73□□□□□ -0.05
CAPN1-203ENST00000525013 SC5DO75845 299 aa14.73□□□□□ -0.05
CAPN1-203ENST00000525013 C1orf100Q5SVJ3 147 aa14.73□□□□□ -0.05
CAPN1-203ENST00000525013 GAPTQ8N292 157 aa14.73□□□□□ -0.05
CAPN1-203ENST00000525013 C5orf56Q8N8D9 126 aa14.73□□□□□ -0.05
CAPN1-203ENST00000525013 DUSP21Q9H596 190 aa14.73□□□□□ -0.05
CAPN1-203ENST00000525013 TAF9BQ9HBM6 251 aa14.73□□□□□ -0.05
CAPN1-203ENST00000525013 OR2S2Q9NQN1 319 aa14.73□□□□□ -0.05
CAPN1-203ENST00000525013 TSSC4Q9Y5U2 329 aaPredicted RBP14.73□□□□□ -0.05
CAPN1-203ENST00000525013 NCBP2LA6PVI3 153 aaKnown RBP14.72□□□□□ -0.05
CAPN1-203ENST00000525013 UCHL1P09936 223 aa14.72□□□□□ -0.05
CAPN1-203ENST00000525013 VSIG8P0DPA2 414 aa14.72□□□□□ -0.05
CAPN1-203ENST00000525013 HTR2CP28335 458 aa14.72□□□□□ -0.05
CAPN1-203ENST00000525013 BEAN1Q3B7T3 259 aa14.72□□□□□ -0.05
CAPN1-203ENST00000525013 TMEM30BQ3MIR4 351 aa14.72□□□□□ -0.05
CAPN1-203ENST00000525013 Q3ZCU0 254 aa14.72□□□□□ -0.05
CAPN1-203ENST00000525013 SAMD5Q5TGI4 173 aa14.72□□□□□ -0.05
CAPN1-203ENST00000525013 OR2T10Q8NGZ9 312 aa14.72□□□□□ -0.05
CAPN1-203ENST00000525013 KCNG3Q8TAE7 436 aa14.72□□□□□ -0.05
CAPN1-203ENST00000525013 RTN4IP1Q8WWV3 396 aaPredicted RBP14.72□□□□□ -0.05
CAPN1-203ENST00000525013 EAF1Q96JC9 268 aaPredicted RBP14.72□□□□□ -0.05
CAPN1-203ENST00000525013 TMEM59Q9BXS4 323 aa14.72□□□□□ -0.05
CAPN1-203ENST00000525013 ANKRD60Q9BZ19 345 aa14.72□□□□□ -0.05
CAPN1-203ENST00000525013 PSMB11A5LHX3 300 aa14.71□□□□□ -0.05
CAPN1-203ENST00000525013 FGF16O43320 207 aa14.71□□□□□ -0.05
CAPN1-203ENST00000525013 ZNF134P52741 427 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms