RNA–Protein interactions for RNA: ENST00000524895.5

TSPAN4-213, Transcript of tetraspanin 4, humanhuman

TSL 4

Gene TSPAN4, Length 401 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-213ENST00000524895 CD74P04233 296 aa13.04□□□□□ -0.32
TSPAN4-213ENST00000524895 CTXN2P0C2S0 81 aa13.04□□□□□ -0.32
TSPAN4-213ENST00000524895 CGB3P0DN86 165 aa13.04□□□□□ -0.32
TSPAN4-213ENST00000524895 CGB7P0DN87 165 aa13.04□□□□□ -0.32
TSPAN4-213ENST00000524895 OMGP23515 440 aa13.04□□□□□ -0.32
TSPAN4-213ENST00000524895 IFITM3Q01628 133 aa13.04□□□□□ -0.32
TSPAN4-213ENST00000524895 DYRK1AQ13627 763 aa13.04□□□□□ -0.32
TSPAN4-213ENST00000524895 MEF2DQ14814 521 aa13.04□□□□□ -0.32
TSPAN4-213ENST00000524895 LTC4SQ16873 150 aa13.04□□□□□ -0.32
TSPAN4-213ENST00000524895 IGSF11Q5DX21 431 aa13.04□□□□□ -0.32
TSPAN4-213ENST00000524895 PRAMEF5Q5TYX0 476 aa13.04□□□□□ -0.32
TSPAN4-213ENST00000524895 BTNL3Q6UXE8 466 aa13.04□□□□□ -0.32
TSPAN4-213ENST00000524895 MAPK1IP1LQ8NDC0 245 aa13.04□□□□□ -0.32
TSPAN4-213ENST00000524895 OR4C16Q8NGL9 310 aa13.04□□□□□ -0.32
TSPAN4-213ENST00000524895 DEDD2Q8WXF8 326 aa13.04□□□□□ -0.32
TSPAN4-213ENST00000524895 GINS4Q9BRT9 223 aa13.04□□□□□ -0.32
TSPAN4-213ENST00000524895 CABLES2Q9BTV7 478 aa13.04□□□□□ -0.32
TSPAN4-213ENST00000524895 TINAGL1Q9GZM7 467 aaPredicted RBP13.04□□□□□ -0.32
TSPAN4-213ENST00000524895 POLR3KQ9Y2Y1 108 aaPredicted RBP13.04□□□□□ -0.32
TSPAN4-213ENST00000524895 IGKV1-6A0A0C4DH72 117 aa13.03□□□□□ -0.32
TSPAN4-213ENST00000524895 hCG_1809904A0A1W2PP81 198 aa13.03□□□□□ -0.32
TSPAN4-213ENST00000524895 A0A1W2PPE2 198 aa13.03□□□□□ -0.32
TSPAN4-213ENST00000524895 A0A1W2PR64 198 aa13.03□□□□□ -0.32
TSPAN4-213ENST00000524895 A0A1W2PRV1 198 aa13.03□□□□□ -0.32
TSPAN4-213ENST00000524895 CENPXA8MT69 81 aa13.03□□□□□ -0.32
TSPAN4-213ENST00000524895 NPIPB11E5RHQ5 1161 aa13.03□□□□□ -0.32
TSPAN4-213ENST00000524895 SDCBPO00560 298 aaPredicted RBP13.03□□□□□ -0.32
TSPAN4-213ENST00000524895 HSPA12AO43301 675 aa13.03□□□□□ -0.32
TSPAN4-213ENST00000524895 DIRAS3O95661 229 aa13.03□□□□□ -0.32
TSPAN4-213ENST00000524895 IFNA6P05013 189 aa13.03□□□□□ -0.32
TSPAN4-213ENST00000524895 MSMBP08118 114 aa13.03□□□□□ -0.32
TSPAN4-213ENST00000524895 FPR2P25090 351 aa13.03□□□□□ -0.32
TSPAN4-213ENST00000524895 RFX2P48378 723 aa13.03□□□□□ -0.32
TSPAN4-213ENST00000524895 DLX6P56179 175 aa13.03□□□□□ -0.32
TSPAN4-213ENST00000524895 DEFA1P59665 94 aa13.03□□□□□ -0.32
TSPAN4-213ENST00000524895 DEFA3P59666 94 aa13.03□□□□□ -0.32
TSPAN4-213ENST00000524895 HERPUD1Q15011 391 aa13.03□□□□□ -0.32
TSPAN4-213ENST00000524895 TMEM30BQ3MIR4 351 aa13.03□□□□□ -0.32
TSPAN4-213ENST00000524895 VAX1Q5SQQ9 334 aa13.03□□□□□ -0.32
TSPAN4-213ENST00000524895 FAAP20Q6NZ36 180 aa13.03□□□□□ -0.32
TSPAN4-213ENST00000524895 LINC01356Q8N9X3 169 aa13.03□□□□□ -0.32
TSPAN4-213ENST00000524895 OR4D10Q8NGI6 311 aa13.03□□□□□ -0.32
TSPAN4-213ENST00000524895 OR10J5Q8NHC4 309 aa13.03□□□□□ -0.32
TSPAN4-213ENST00000524895 C1orf159Q96HA4 380 aa13.03□□□□□ -0.32
TSPAN4-213ENST00000524895 DMRTB1Q96MA1 342 aa13.03□□□□□ -0.32
TSPAN4-213ENST00000524895 LINC00574Q9H8X3 128 aa13.03□□□□□ -0.32
TSPAN4-213ENST00000524895 HRASLSQ9HDD0 168 aa13.03□□□□□ -0.32
TSPAN4-213ENST00000524895 MCUBQ9NWR8 336 aa13.03□□□□□ -0.32
TSPAN4-213ENST00000524895 IDI2-AS1Q9NZ38 188 aa13.03□□□□□ -0.32
TSPAN4-213ENST00000524895 SLC23A1Q9UHI7 598 aa13.03□□□□□ -0.32
TSPAN4-213ENST00000524895 VPS13CQ709C8 3753 aa13.02□□□□□ -0.32
TSPAN4-213ENST00000524895 MAP1AP78559 2803 aaPredicted RBP13.02□□□□□ -0.33
TSPAN4-213ENST00000524895 DSCAML1Q8TD84 2053 aa13.02□□□□□ -0.33
TSPAN4-213ENST00000524895 DISC1C4P0D8 188 aa13.02□□□□□ -0.33
TSPAN4-213ENST00000524895 M0R1W7 72 aa13.02□□□□□ -0.33
TSPAN4-213ENST00000524895 F2RL2O00254 374 aa13.02□□□□□ -0.33
TSPAN4-213ENST00000524895 RBP4P02753 201 aa13.02□□□□□ -0.33
TSPAN4-213ENST00000524895 AMY2AP04746 511 aa13.02□□□□□ -0.33
TSPAN4-213ENST00000524895 OR5H8P0DN80 308 aa13.02□□□□□ -0.33
TSPAN4-213ENST00000524895 ZBTB25P24278 435 aa13.02□□□□□ -0.33
TSPAN4-213ENST00000524895 TSPAN5P62079 268 aa13.02□□□□□ -0.33
TSPAN4-213ENST00000524895 HTD2P86397 168 aa13.02□□□□□ -0.33
TSPAN4-213ENST00000524895 PAX2Q02962 417 aa13.02□□□□□ -0.33
TSPAN4-213ENST00000524895 ASAH1Q13510 395 aa13.02□□□□□ -0.33
TSPAN4-213ENST00000524895 TMEM249Q2WGJ8 235 aa13.02□□□□□ -0.33
TSPAN4-213ENST00000524895 HEPN1Q6WQI6 88 aa13.02□□□□□ -0.33
TSPAN4-213ENST00000524895 OVCH2Q7RTZ1 564 aa13.02□□□□□ -0.33
TSPAN4-213ENST00000524895 KIR3DL3Q8N743 410 aa13.02□□□□□ -0.33
TSPAN4-213ENST00000524895 OR10A7Q8NGE5 316 aa13.02□□□□□ -0.33
TSPAN4-213ENST00000524895 OR56B4Q8NH76 319 aa13.02□□□□□ -0.33
TSPAN4-213ENST00000524895 DACT3Q96B18 629 aaPredicted RBP13.02□□□□□ -0.33
TSPAN4-213ENST00000524895 C7orf50Q9BRJ6 194 aaKnown RBP13.02□□□□□ -0.33
TSPAN4-213ENST00000524895 OR2S2Q9NQN1 319 aa13.02□□□□□ -0.33
TSPAN4-213ENST00000524895 MMP26Q9NRE1 261 aa13.02□□□□□ -0.33
TSPAN4-213ENST00000524895 OR1A1Q9P1Q5 309 aa13.02□□□□□ -0.33
TSPAN4-213ENST00000524895 GNG12Q9UBI6 72 aa13.02□□□□□ -0.33
TSPAN4-213ENST00000524895 PRRC2AP48634 2157 aaKnown RBP13.01□□□□□ -0.33
TSPAN4-213ENST00000524895 TRBV6-7A0A0A0MS04 114 aa13.01□□□□□ -0.33
TSPAN4-213ENST00000524895 IGHV3-43A0A0B4J1X8 118 aa13.01□□□□□ -0.33
TSPAN4-213ENST00000524895 NAP1L6A6NFF2 107 aa13.01□□□□□ -0.33
TSPAN4-213ENST00000524895 C17orf98A8MV24 154 aa13.01□□□□□ -0.33
TSPAN4-213ENST00000524895 LYRM1O43325 122 aa13.01□□□□□ -0.33
TSPAN4-213ENST00000524895 IGHV3-43DP0DP04 118 aa13.01□□□□□ -0.33
TSPAN4-213ENST00000524895 NFYBP25208 207 aa13.01□□□□□ -0.33
TSPAN4-213ENST00000524895 GZMKP49863 264 aa13.01□□□□□ -0.33
TSPAN4-213ENST00000524895 DVL1P1P54792 670 aaPredicted RBP13.01□□□□□ -0.33
TSPAN4-213ENST00000524895 ARF6P62330 175 aa13.01□□□□□ -0.33
TSPAN4-213ENST00000524895 GNMTQ14749 295 aa13.01□□□□□ -0.33
TSPAN4-213ENST00000524895 METTL11BQ5VVY1 283 aa13.01□□□□□ -0.33
TSPAN4-213ENST00000524895 ZNF782Q6ZMW2 699 aaPredicted RBP13.01□□□□□ -0.33
TSPAN4-213ENST00000524895 TMEM17Q86X19 198 aa13.01□□□□□ -0.33
TSPAN4-213ENST00000524895 ARRDC1Q8N5I2 433 aa13.01□□□□□ -0.33
TSPAN4-213ENST00000524895 OR52L2PQ8NGH6 319 aa13.01□□□□□ -0.33
TSPAN4-213ENST00000524895 OR10V1Q8NGI7 309 aa13.01□□□□□ -0.33
TSPAN4-213ENST00000524895 ZNF69Q9UC07 566 aa13.01□□□□□ -0.33
TSPAN4-213ENST00000524895 JPT1Q9UK76 154 aa13.01□□□□□ -0.33
TSPAN4-213ENST00000524895 TBC1D24Q9ULP9 559 aa13.01□□□□□ -0.33
TSPAN4-213ENST00000524895 KPTNQ9Y664 436 aa13.01□□□□□ -0.33
TSPAN4-213ENST00000524895 MALRD1Q5VYJ5 2156 aa13.01□□□□□ -0.33
TSPAN4-213ENST00000524895 CCDC168Q8NDH2 2452 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms