RNA–Protein interactions for RNA: ENST00000524277.1

SPARC-206, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 505 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-206ENST00000524277 RTN4IP1Q8WWV3 396 aaPredicted RBP9.33□□□□□ -0.92
SPARC-206ENST00000524277 RGP1Q92546 391 aaPredicted RBP9.33□□□□□ -0.92
SPARC-206ENST00000524277 ST6GALNAC6Q969X2 333 aa9.33□□□□□ -0.92
SPARC-206ENST00000524277 SMIM19Q96E16 107 aa9.33□□□□□ -0.92
SPARC-206ENST00000524277 WWC2-AS2Q96NR7 200 aa9.33□□□□□ -0.92
SPARC-206ENST00000524277 EXOSC1Q9Y3B2 195 aaKnown RBP9.33□□□□□ -0.92
SPARC-206ENST00000524277 FAM90A10PA6NDY2 464 aa9.32□□□□□ -0.92
SPARC-206ENST00000524277 FAM90A7PA6NKC0 464 aa9.32□□□□□ -0.92
SPARC-206ENST00000524277 FAM90A23PA8MXZ1 464 aa9.32□□□□□ -0.92
SPARC-206ENST00000524277 AIPO00170 330 aa9.32□□□□□ -0.92
SPARC-206ENST00000524277 CCL24O00175 119 aa9.32□□□□□ -0.92
SPARC-206ENST00000524277 IGFBP3P17936 291 aaPredicted RBP9.32□□□□□ -0.92
SPARC-206ENST00000524277 SERPINA2P20848 420 aa9.32□□□□□ -0.92
SPARC-206ENST00000524277 GPR50Q13585 617 aa9.32□□□□□ -0.92
SPARC-206ENST00000524277 Q499Y3 187 aa9.32□□□□□ -0.92
SPARC-206ENST00000524277 YIF1BQ5BJH7 314 aa9.32□□□□□ -0.92
SPARC-206ENST00000524277 C9orf66Q5T8R8 295 aa9.32□□□□□ -0.92
SPARC-206ENST00000524277 SLC25A48Q6ZT89 311 aaKnown RBP9.32□□□□□ -0.92
SPARC-206ENST00000524277 ZNF554Q86TJ5 538 aa9.32□□□□□ -0.92
SPARC-206ENST00000524277 Q8N9W7 124 aa9.32□□□□□ -0.92
SPARC-206ENST00000524277 OR5M8Q8NGP6 311 aa9.32□□□□□ -0.92
SPARC-206ENST00000524277 APH1BQ8WW43 257 aa9.32□□□□□ -0.92
SPARC-206ENST00000524277 S1PR3Q99500 378 aa9.32□□□□□ -0.92
SPARC-206ENST00000524277 ZNF184Q99676 751 aaPredicted RBP9.32□□□□□ -0.92
SPARC-206ENST00000524277 SLC29A1Q99808 456 aa9.32□□□□□ -0.92
SPARC-206ENST00000524277 DCLRE1BQ9H816 532 aa9.32□□□□□ -0.92
SPARC-206ENST00000524277 S100A14Q9HCY8 104 aa9.32□□□□□ -0.92
SPARC-206ENST00000524277 RCC2Q9P258 522 aaKnown RBP9.32□□□□□ -0.92
SPARC-206ENST00000524277 LINC00527Q9UJ94 153 aa9.32□□□□□ -0.92
SPARC-206ENST00000524277 TRAPPC2LQ9UL33 140 aa9.32□□□□□ -0.92
SPARC-206ENST00000524277 DIMT1Q9UNQ2 313 aaKnown RBP9.32□□□□□ -0.92
SPARC-206ENST00000524277 DNAH9Q9NYC9 4486 aa9.32□□□□□ -0.92
SPARC-206ENST00000524277 COL7A1Q02388 2944 aa9.32□□□□□ -0.92
SPARC-206ENST00000524277 NBEAL2Q6ZNJ1 2754 aa9.32□□□□□ -0.92
SPARC-206ENST00000524277 TRAV39A0A0B4J263 110 aa9.31□□□□□ -0.92
SPARC-206ENST00000524277 TRBV5-5A0A0J9YX44 114 aa9.31□□□□□ -0.92
SPARC-206ENST00000524277 A0A1W2PPE3 182 aa9.31□□□□□ -0.92
SPARC-206ENST00000524277 IGF1P05019 195 aa9.31□□□□□ -0.92
SPARC-206ENST00000524277 FSTP19883 344 aa9.31□□□□□ -0.92
SPARC-206ENST00000524277 VDAC1P21796 283 aa9.31□□□□□ -0.92
SPARC-206ENST00000524277 SOX6P35712 828 aa9.31□□□□□ -0.92
SPARC-206ENST00000524277 ETV1P50549 477 aa9.31□□□□□ -0.92
SPARC-206ENST00000524277 SLC22A6Q4U2R8 563 aa9.31□□□□□ -0.92
SPARC-206ENST00000524277 GAPTQ8N292 157 aa9.31□□□□□ -0.92
SPARC-206ENST00000524277 PQLC1Q8N2U9 271 aa9.31□□□□□ -0.92
SPARC-206ENST00000524277 TMEM104Q8NE00 496 aa9.31□□□□□ -0.92
SPARC-206ENST00000524277 CCDC107Q8WV48 283 aa9.31□□□□□ -0.92
SPARC-206ENST00000524277 THRSPQ92748 146 aa9.31□□□□□ -0.92
SPARC-206ENST00000524277 GHSRQ92847 366 aa9.31□□□□□ -0.92
SPARC-206ENST00000524277 C8orf4Q9NR00 106 aa9.31□□□□□ -0.92
SPARC-206ENST00000524277 PLSCR3Q9NRY6 295 aa9.31□□□□□ -0.92
SPARC-206ENST00000524277 SMPD3Q9NY59 655 aaPredicted RBP9.31□□□□□ -0.92
SPARC-206ENST00000524277 GNG12Q9UBI6 72 aa9.31□□□□□ -0.92
SPARC-206ENST00000524277 LRRC42Q9Y546 428 aa9.31□□□□□ -0.92
SPARC-206ENST00000524277 IGHV3-72A0A0B4J1Y9 119 aa9.3□□□□□ -0.92
SPARC-206ENST00000524277 LANCL1O43813 399 aa9.3□□□□□ -0.92
SPARC-206ENST00000524277 WBP4O75554 376 aaKnown RBP9.3□□□□□ -0.92
SPARC-206ENST00000524277 IGHG4P01861 327 aa9.3□□□□□ -0.92
SPARC-206ENST00000524277 REG1BP48304 166 aa9.3□□□□□ -0.92
SPARC-206ENST00000524277 TAS2R43P59537 309 aa9.3□□□□□ -0.92
SPARC-206ENST00000524277 SYT6Q5T7P8 510 aaPredicted RBP9.3□□□□□ -0.92
SPARC-206ENST00000524277 OR2G6Q5TZ20 316 aa9.3□□□□□ -0.92
SPARC-206ENST00000524277 TTC23Q5W5X9 447 aa9.3□□□□□ -0.92
SPARC-206ENST00000524277 DMKNQ6E0U4 476 aaPredicted RBP9.3□□□□□ -0.92
SPARC-206ENST00000524277 XAF1Q6GPH4 301 aa9.3□□□□□ -0.92
SPARC-206ENST00000524277 C18orf65Q6ZTR6 163 aa9.3□□□□□ -0.92
SPARC-206ENST00000524277 FAM71E2Q8N5Q1 922 aa9.3□□□□□ -0.92
SPARC-206ENST00000524277 ZNF439Q8NDP4 499 aa9.3□□□□□ -0.92
SPARC-206ENST00000524277 SETD9Q8NE22 299 aa9.3□□□□□ -0.92
SPARC-206ENST00000524277 TMEM80Q96HE8 168 aa9.3□□□□□ -0.92
SPARC-206ENST00000524277 RAX2Q96IS3 184 aa9.3□□□□□ -0.92
SPARC-206ENST00000524277 ETAA1Q9NY74 926 aa9.3□□□□□ -0.92
SPARC-206ENST00000524277 LINC01548A6NM66 108 aa9.29□□□□□ -0.92
SPARC-206ENST00000524277 C12orf77C9JDV5 145 aa9.29□□□□□ -0.92
SPARC-206ENST00000524277 SC5DO75845 299 aa9.29□□□□□ -0.92
SPARC-206ENST00000524277 RPLP1P05386 114 aaKnown RBP9.29□□□□□ -0.92
SPARC-206ENST00000524277 CD1AP06126 327 aa9.29□□□□□ -0.92
SPARC-206ENST00000524277 FUT3P21217 361 aa9.29□□□□□ -0.92
SPARC-206ENST00000524277 INSL3P51460 131 aa9.29□□□□□ -0.92
SPARC-206ENST00000524277 LY6G6FQ5SQ64 297 aa9.29□□□□□ -0.92
SPARC-206ENST00000524277 RAB12Q6IQ22 244 aa9.29□□□□□ -0.92
SPARC-206ENST00000524277 C11orf87Q6NUJ2 197 aa9.29□□□□□ -0.92
SPARC-206ENST00000524277 GLIPR1L1Q6UWM5 242 aa9.29□□□□□ -0.92
SPARC-206ENST00000524277 LCNL1Q6ZST4 164 aa9.29□□□□□ -0.92
SPARC-206ENST00000524277 C4orf3Q8WVX3 66 aa9.29□□□□□ -0.92
SPARC-206ENST00000524277 KCNIP1Q9NZI2 227 aa9.29□□□□□ -0.92
SPARC-206ENST00000524277 GHRLQ9UBU3 117 aa9.29□□□□□ -0.92
SPARC-206ENST00000524277 MRPS28Q9Y2Q9 187 aaKnown RBP9.29□□□□□ -0.92
SPARC-206ENST00000524277 PEX16Q9Y5Y5 336 aa9.29□□□□□ -0.92
SPARC-206ENST00000524277 TRBV5-7A0A0A0MS05 114 aa9.28□□□□□ -0.92
SPARC-206ENST00000524277 IGHV3-43A0A0B4J1X8 118 aa9.28□□□□□ -0.92
SPARC-206ENST00000524277 RGS11O94810 467 aa9.28□□□□□ -0.92
SPARC-206ENST00000524277 HBZP02008 142 aa9.28□□□□□ -0.92
SPARC-206ENST00000524277 IGHV3-43DP0DP04 118 aa9.28□□□□□ -0.92
SPARC-206ENST00000524277 PSMB8P28062 276 aa9.28□□□□□ -0.92
SPARC-206ENST00000524277 VHLP40337 213 aa9.28□□□□□ -0.92
SPARC-206ENST00000524277 RAB25P57735 213 aa9.28□□□□□ -0.92
SPARC-206ENST00000524277 HTD2P86397 168 aa9.28□□□□□ -0.92
SPARC-206ENST00000524277 CFHR3Q02985 330 aa9.28□□□□□ -0.92
SPARC-206ENST00000524277 DOC2BQ14184 412 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms