RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 ADH4P08319 380 aa11.27□□□□□ -0.61
PCDHGB1-201ENST00000523390 TMEM11P17152 192 aa11.27□□□□□ -0.61
PCDHGB1-201ENST00000523390 RCC1P18754 421 aaPredicted RBP11.27□□□□□ -0.61
PCDHGB1-201ENST00000523390 TUSC1Q2TAM9 212 aa11.27□□□□□ -0.61
PCDHGB1-201ENST00000523390 C2CD4CQ8TF44 421 aa11.27□□□□□ -0.61
PCDHGB1-201ENST00000523390 MTCH1Q9NZJ7 389 aa11.27□□□□□ -0.61
PCDHGB1-201ENST00000523390 DHRS7CA6NNS2 312 aa11.26□□□□□ -0.61
PCDHGB1-201ENST00000523390 KCNAB3O43448 404 aa11.26□□□□□ -0.61
PCDHGB1-201ENST00000523390 MBP02144 154 aa11.26□□□□□ -0.61
PCDHGB1-201ENST00000523390 COX5BP10606 129 aa11.26□□□□□ -0.61
PCDHGB1-201ENST00000523390 R3HDM4Q96D70 268 aa11.26□□□□□ -0.61
PCDHGB1-201ENST00000523390 CCL13Q99616 98 aa11.26□□□□□ -0.61
PCDHGB1-201ENST00000523390 LINC00470Q9BZP3 86 aa11.26□□□□□ -0.61
PCDHGB1-201ENST00000523390 NMES1Q9C002 83 aa11.26□□□□□ -0.61
PCDHGB1-201ENST00000523390 NEURL1O76050 574 aa11.26□□□□□ -0.61
PCDHGB1-201ENST00000523390 GAS1P54826 345 aa11.26□□□□□ -0.61
PCDHGB1-201ENST00000523390 Q6ZT83 130 aa11.26□□□□□ -0.61
PCDHGB1-201ENST00000523390 IGLV3-32A0A0A0MS00 114 aa11.26□□□□□ -0.61
PCDHGB1-201ENST00000523390 LOC105371267A0A1B0GV96 52 aa11.26□□□□□ -0.61
PCDHGB1-201ENST00000523390 OR4S2Q8NH73 311 aa11.26□□□□□ -0.61
PCDHGB1-201ENST00000523390 TMEM45BQ96B21 275 aa11.26□□□□□ -0.61
PCDHGB1-201ENST00000523390 Q96M66 194 aa11.26□□□□□ -0.61
PCDHGB1-201ENST00000523390 LRFN3Q9BTN0 628 aa11.26□□□□□ -0.61
PCDHGB1-201ENST00000523390 SCNM1Q9BWG6 230 aa11.26□□□□□ -0.61
PCDHGB1-201ENST00000523390 H7BYZ3 331 aa11.26□□□□□ -0.61
PCDHGB1-201ENST00000523390 PSG2P11465 335 aa11.26□□□□□ -0.61
PCDHGB1-201ENST00000523390 HNF1AP20823 631 aa11.26□□□□□ -0.61
PCDHGB1-201ENST00000523390 ZP3P21754 424 aa11.26□□□□□ -0.61
PCDHGB1-201ENST00000523390 AKR1C3P42330 323 aa11.26□□□□□ -0.61
PCDHGB1-201ENST00000523390 RPL11P62913 178 aaKnown RBP11.26□□□□□ -0.61
PCDHGB1-201ENST00000523390 EFNB1P98172 346 aa11.26□□□□□ -0.61
PCDHGB1-201ENST00000523390 UNC119Q13432 240 aa11.26□□□□□ -0.61
PCDHGB1-201ENST00000523390 OR8G5Q8NG78 346 aa11.26□□□□□ -0.61
PCDHGB1-201ENST00000523390 SMIM7Q9BQ49 75 aa11.26□□□□□ -0.61
PCDHGB1-201ENST00000523390 UBTD1Q9HAC8 227 aa11.26□□□□□ -0.61
PCDHGB1-201ENST00000523390 GAB2Q9UQC2 676 aa11.26□□□□□ -0.61
PCDHGB1-201ENST00000523390 A0A1B0GTI1 187 aa11.25□□□□□ -0.61
PCDHGB1-201ENST00000523390 SYNGR3O43761 229 aa11.25□□□□□ -0.61
PCDHGB1-201ENST00000523390 OR2B8PP59922 312 aa11.25□□□□□ -0.61
PCDHGB1-201ENST00000523390 DLL3Q9NYJ7 618 aa11.25□□□□□ -0.61
PCDHGB1-201ENST00000523390 GPR132Q9UNW8 380 aa11.25□□□□□ -0.61
PCDHGB1-201ENST00000523390 FABP1P07148 127 aa11.25□□□□□ -0.61
PCDHGB1-201ENST00000523390 FAM87AP0C7U9 286 aa11.25□□□□□ -0.61
PCDHGB1-201ENST00000523390 HOXB1P14653 301 aaPredicted RBP11.25□□□□□ -0.61
PCDHGB1-201ENST00000523390 TAS2R45P59539 299 aa11.25□□□□□ -0.61
PCDHGB1-201ENST00000523390 SSTP61278 116 aa11.25□□□□□ -0.61
PCDHGB1-201ENST00000523390 RPL31P62899 125 aaKnown RBP11.25□□□□□ -0.61
PCDHGB1-201ENST00000523390 KHDC1LQ5JSQ8 128 aa11.25□□□□□ -0.61
PCDHGB1-201ENST00000523390 AVPI1Q5T686 147 aa11.25□□□□□ -0.61
PCDHGB1-201ENST00000523390 LINC00596Q86U02 117 aa11.25□□□□□ -0.61
PCDHGB1-201ENST00000523390 ABHD17AQ96GS6 310 aa11.25□□□□□ -0.61
PCDHGB1-201ENST00000523390 AKR1E2Q96JD6 320 aa11.25□□□□□ -0.61
PCDHGB1-201ENST00000523390 SEMA5BQ9P283 1151 aa11.25□□□□□ -0.61
PCDHGB1-201ENST00000523390 CACFD1Q9UGQ2 172 aa11.25□□□□□ -0.61
PCDHGB1-201ENST00000523390 USF3Q68DE3 2245 aa11.25□□□□□ -0.61
PCDHGB1-201ENST00000523390 LRRC3CA6NJW4 275 aa11.25□□□□□ -0.61
PCDHGB1-201ENST00000523390 CLDN14O95500 239 aa11.25□□□□□ -0.61
PCDHGB1-201ENST00000523390 LHX2P50458 406 aa11.25□□□□□ -0.61
PCDHGB1-201ENST00000523390 GUK1Q16774 197 aa11.25□□□□□ -0.61
PCDHGB1-201ENST00000523390 CLEC12BQ2HXU8 276 aa11.25□□□□□ -0.61
PCDHGB1-201ENST00000523390 TMEM56Q96MV1 263 aa11.25□□□□□ -0.61
PCDHGB1-201ENST00000523390 HES4Q9HCC6 221 aa11.25□□□□□ -0.61
PCDHGB1-201ENST00000523390 FAM157AC9JC47 383 aa11.25□□□□□ -0.61
PCDHGB1-201ENST00000523390 S100A7P31151 101 aa11.25□□□□□ -0.61
PCDHGB1-201ENST00000523390 CLDN18P56856 261 aa11.25□□□□□ -0.61
PCDHGB1-201ENST00000523390 OR52L2PQ8NGH6 319 aa11.25□□□□□ -0.61
PCDHGB1-201ENST00000523390 DOPEY2Q9Y3R5 2298 aa11.24□□□□□ -0.61
PCDHGB1-201ENST00000523390 PPIAL4EA0A075B759 164 aa11.24□□□□□ -0.61
PCDHGB1-201ENST00000523390 PPIAL4DF5H284 164 aa11.24□□□□□ -0.61
PCDHGB1-201ENST00000523390 RNASEK-C17orf49H0YIS7 233 aa11.24□□□□□ -0.61
PCDHGB1-201ENST00000523390 OR10J4P0C629 311 aa11.24□□□□□ -0.61
PCDHGB1-201ENST00000523390 PPIAL4FP0DN26 164 aa11.24□□□□□ -0.61
PCDHGB1-201ENST00000523390 F2RP25116 425 aa11.24□□□□□ -0.61
PCDHGB1-201ENST00000523390 G6PCP35575 357 aa11.24□□□□□ -0.61
PCDHGB1-201ENST00000523390 DYNLT3P51808 116 aa11.24□□□□□ -0.61
PCDHGB1-201ENST00000523390 ERVS71-1P61550 626 aa11.24□□□□□ -0.61
PCDHGB1-201ENST00000523390 FFAR4Q5NUL3 377 aa11.24□□□□□ -0.61
PCDHGB1-201ENST00000523390 C15orf54Q8N8G6 183 aa11.24□□□□□ -0.61
PCDHGB1-201ENST00000523390 TPPP3Q9BW30 176 aa11.24□□□□□ -0.61
PCDHGB1-201ENST00000523390 PPIAL4AQ9Y536 164 aa11.24□□□□□ -0.61
PCDHGB1-201ENST00000523390 GYPAP02724 150 aa11.24□□□□□ -0.61
PCDHGB1-201ENST00000523390 CSRP1P21291 193 aaKnown RBP11.24□□□□□ -0.61
PCDHGB1-201ENST00000523390 PJVKQ0ZLH3 352 aa11.24□□□□□ -0.61
PCDHGB1-201ENST00000523390 ZNF154Q13106 437 aa11.24□□□□□ -0.61
PCDHGB1-201ENST00000523390 RTP5Q14D33 572 aa11.24□□□□□ -0.61
PCDHGB1-201ENST00000523390 BMPERQ8N8U9 685 aa11.24□□□□□ -0.61
PCDHGB1-201ENST00000523390 hCG_38984A0A1B0GV85 526 aa11.24□□□□□ -0.61
PCDHGB1-201ENST00000523390 CDS2O95674 445 aa11.24□□□□□ -0.61
PCDHGB1-201ENST00000523390 HBZP02008 142 aa11.24□□□□□ -0.61
PCDHGB1-201ENST00000523390 KCNMB1Q16558 191 aa11.24□□□□□ -0.61
PCDHGB1-201ENST00000523390 ABHD14BQ96IU4 210 aa11.24□□□□□ -0.61
PCDHGB1-201ENST00000523390 CLDN16Q9Y5I7 305 aa11.24□□□□□ -0.61
PCDHGB1-201ENST00000523390 MGST3O14880 152 aa11.23□□□□□ -0.61
PCDHGB1-201ENST00000523390 OR2C1O95371 312 aa11.23□□□□□ -0.61
PCDHGB1-201ENST00000523390 CXCL2P19875 107 aa11.23□□□□□ -0.61
PCDHGB1-201ENST00000523390 ARL3P36405 182 aa11.23□□□□□ -0.61
PCDHGB1-201ENST00000523390 NECAP1Q8NC96 275 aa11.23□□□□□ -0.61
PCDHGB1-201ENST00000523390 ADTRPQ96IZ2 230 aa11.23□□□□□ -0.61
PCDHGB1-201ENST00000523390 NPDC1Q9NQX5 325 aaPredicted RBP11.23□□□□□ -0.61
PCDHGB1-201ENST00000523390 NPTNQ9Y639 398 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms