RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 NPBQ8NG41 125 aa10.38□□□□□ -0.75
NKX3-1-202ENST00000523261 UBALD1Q8TB05 177 aa10.38□□□□□ -0.75
NKX3-1-202ENST00000523261 C10orf35Q96D05 121 aa10.38□□□□□ -0.75
NKX3-1-202ENST00000523261 NIPSNAP1Q9BPW8 284 aa10.38□□□□□ -0.75
NKX3-1-202ENST00000523261 FAM118AQ9NWS6 357 aa10.38□□□□□ -0.75
NKX3-1-202ENST00000523261 RAB21Q9UL25 225 aa10.38□□□□□ -0.75
NKX3-1-202ENST00000523261 TP53TG1Q9Y2A0 90 aa10.38□□□□□ -0.75
NKX3-1-202ENST00000523261 CCDC182A6NF36 153 aa10.37□□□□□ -0.75
NKX3-1-202ENST00000523261 C15orf65H3BRN8 121 aa10.37□□□□□ -0.75
NKX3-1-202ENST00000523261 NDUFA3O95167 84 aa10.37□□□□□ -0.75
NKX3-1-202ENST00000523261 APOL3O95236 402 aa10.37□□□□□ -0.75
NKX3-1-202ENST00000523261 COX4I1P13073 169 aa10.37□□□□□ -0.75
NKX3-1-202ENST00000523261 ATF1P18846 271 aa10.37□□□□□ -0.75
NKX3-1-202ENST00000523261 PRKACBP22694 351 aa10.37□□□□□ -0.75
NKX3-1-202ENST00000523261 BMI1P35226 326 aa10.37□□□□□ -0.75
NKX3-1-202ENST00000523261 CXCR4P61073 352 aa10.37□□□□□ -0.75
NKX3-1-202ENST00000523261 GINS1Q14691 196 aa10.37□□□□□ -0.75
NKX3-1-202ENST00000523261 MICAQ29983 383 aa10.37□□□□□ -0.75
NKX3-1-202ENST00000523261 MOGAT2Q3SYC2 334 aa10.37□□□□□ -0.75
NKX3-1-202ENST00000523261 Q3ZCU0 254 aa10.37□□□□□ -0.75
NKX3-1-202ENST00000523261 AKIRIN2Q53H80 203 aa10.37□□□□□ -0.75
NKX3-1-202ENST00000523261 UNQ5815/PRO19632Q6UWF5 114 aa10.37□□□□□ -0.75
NKX3-1-202ENST00000523261 TMEM179BQ7Z7N9 219 aa10.37□□□□□ -0.75
NKX3-1-202ENST00000523261 CCDC54Q8NEL0 328 aa10.37□□□□□ -0.75
NKX3-1-202ENST00000523261 OR5D18Q8NGL1 313 aa10.37□□□□□ -0.75
NKX3-1-202ENST00000523261 CNIH3Q8TBE1 160 aa10.37□□□□□ -0.75
NKX3-1-202ENST00000523261 ADAT3Q96EY9 351 aaPredicted RBP10.37□□□□□ -0.75
NKX3-1-202ENST00000523261 RTL8CO15255 209 aa10.36□□□□□ -0.75
NKX3-1-202ENST00000523261 XRCC3O43542 346 aa10.36□□□□□ -0.75
NKX3-1-202ENST00000523261 LANCL1O43813 399 aa10.36□□□□□ -0.75
NKX3-1-202ENST00000523261 RPP14O95059 124 aaKnown RBP10.36□□□□□ -0.75
NKX3-1-202ENST00000523261 GZMHP20718 246 aa10.36□□□□□ -0.75
NKX3-1-202ENST00000523261 CD40LGP29965 261 aa10.36□□□□□ -0.75
NKX3-1-202ENST00000523261 ALDH3A2P51648 485 aa10.36□□□□□ -0.75
NKX3-1-202ENST00000523261 ZNF134P52741 427 aa10.36□□□□□ -0.75
NKX3-1-202ENST00000523261 ACTR3P61158 418 aa10.36□□□□□ -0.75
NKX3-1-202ENST00000523261 PSME3P61289 254 aa10.36□□□□□ -0.75
NKX3-1-202ENST00000523261 UTS2BQ765I0 119 aa10.36□□□□□ -0.75
NKX3-1-202ENST00000523261 PPP1R27Q86WC6 154 aa10.36□□□□□ -0.75
NKX3-1-202ENST00000523261 SAXO1Q8IYX7 474 aa10.36□□□□□ -0.75
NKX3-1-202ENST00000523261 ABHD5Q8WTS1 349 aa10.36□□□□□ -0.75
NKX3-1-202ENST00000523261 ARL11Q969Q4 196 aa10.36□□□□□ -0.75
NKX3-1-202ENST00000523261 SPSB1Q96BD6 273 aa10.36□□□□□ -0.75
NKX3-1-202ENST00000523261 OPALINQ96PE5 141 aa10.36□□□□□ -0.75
NKX3-1-202ENST00000523261 FAM103A1Q9BTL3 118 aaKnown RBP10.36□□□□□ -0.75
NKX3-1-202ENST00000523261 EFCAB1Q9HAE3 211 aa10.36□□□□□ -0.75
NKX3-1-202ENST00000523261 RNF150Q9ULK6 438 aa10.36□□□□□ -0.75
NKX3-1-202ENST00000523261 GAB2Q9UQC2 676 aa10.36□□□□□ -0.75
NKX3-1-202ENST00000523261 LOC102724200A0A096LPH7 203 aaPredicted RBP10.35□□□□□ -0.75
NKX3-1-202ENST00000523261 C13orf42A0A1B0GVH6 325 aa10.35□□□□□ -0.75
NKX3-1-202ENST00000523261 FCN1O00602 326 aa10.35□□□□□ -0.75
NKX3-1-202ENST00000523261 SPRY2O43597 315 aa10.35□□□□□ -0.75
NKX3-1-202ENST00000523261 OR2A4O95047 310 aa10.35□□□□□ -0.75
NKX3-1-202ENST00000523261 CSTBP04080 98 aaKnown RBP10.35□□□□□ -0.75
NKX3-1-202ENST00000523261 KCNJ3P48549 501 aa10.35□□□□□ -0.75
NKX3-1-202ENST00000523261 TATDN3Q17R31 274 aa10.35□□□□□ -0.75
NKX3-1-202ENST00000523261 CT45A1Q5HYN5 189 aa10.35□□□□□ -0.75
NKX3-1-202ENST00000523261 TMEM217Q8N7C4 229 aa10.35□□□□□ -0.75
NKX3-1-202ENST00000523261 LFNGQ8NES3 379 aa10.35□□□□□ -0.75
NKX3-1-202ENST00000523261 CT45A3Q8NHU0 189 aa10.35□□□□□ -0.75
NKX3-1-202ENST00000523261 RNF183Q96D59 192 aa10.35□□□□□ -0.75
NKX3-1-202ENST00000523261 NSMCE2Q96MF7 247 aa10.35□□□□□ -0.75
NKX3-1-202ENST00000523261 NEK6Q9HC98 313 aa10.35□□□□□ -0.75
NKX3-1-202ENST00000523261 MAGEL2Q9UJ55 1249 aa10.35□□□□□ -0.75
NKX3-1-202ENST00000523261 DHDHQ9UQ10 334 aa10.35□□□□□ -0.75
NKX3-1-202ENST00000523261 LOC107986453A0A1B0GWG9 222 aa10.34□□□□□ -0.75
NKX3-1-202ENST00000523261 MAGEB3O15480 346 aa10.34□□□□□ -0.75
NKX3-1-202ENST00000523261 MITFO75030 526 aaPredicted RBP10.34□□□□□ -0.75
NKX3-1-202ENST00000523261 TRBV12-3P01733 135 aa10.34□□□□□ -0.75
NKX3-1-202ENST00000523261 HMGN1P05114 100 aa10.34□□□□□ -0.75
NKX3-1-202ENST00000523261 GUCA2BQ16661 112 aa10.34□□□□□ -0.75
NKX3-1-202ENST00000523261 Q6ZWC4 215 aa10.34□□□□□ -0.75
NKX3-1-202ENST00000523261 GVQW1Q8N7I0 195 aa10.34□□□□□ -0.75
NKX3-1-202ENST00000523261 MAPKAPK5-AS1Q8N8E1 139 aa10.34□□□□□ -0.75
NKX3-1-202ENST00000523261 RDH12Q96NR8 316 aa10.34□□□□□ -0.75
NKX3-1-202ENST00000523261 NR1H4Q96RI1 486 aaPredicted RBP10.34□□□□□ -0.75
NKX3-1-202ENST00000523261 CNN2Q99439 309 aaKnown RBP10.34□□□□□ -0.75
NKX3-1-202ENST00000523261 ADI1Q9BV57 179 aa10.34□□□□□ -0.75
NKX3-1-202ENST00000523261 FBXL15Q9H469 300 aa10.34□□□□□ -0.75
NKX3-1-202ENST00000523261 ZC4H2Q9NQZ6 224 aa10.34□□□□□ -0.75
NKX3-1-202ENST00000523261 TCTAP57738 103 aa10.33□□□□□ -0.76
NKX3-1-202ENST00000523261 DEFB114Q30KQ6 69 aa10.33□□□□□ -0.76
NKX3-1-202ENST00000523261 MRPL20Q9BYC9 149 aaKnown RBP10.33□□□□□ -0.76
NKX3-1-202ENST00000523261 SPAG4Q9NPE6 437 aa10.33□□□□□ -0.76
NKX3-1-202ENST00000523261 NDE1Q9NXR1 346 aa10.33□□□□□ -0.76
NKX3-1-202ENST00000523261 PEMTQ9UBM1 199 aa10.33□□□□□ -0.76
NKX3-1-202ENST00000523261 PEF1Q9UBV8 284 aaKnown RBP10.33□□□□□ -0.76
NKX3-1-202ENST00000523261 SAMHD1Q9Y3Z3 626 aaKnown RBP10.33□□□□□ -0.76
NKX3-1-202ENST00000523261 A0A0G2JLM5 398 aa10.32□□□□□ -0.76
NKX3-1-202ENST00000523261 RRHO14718 337 aa10.32□□□□□ -0.76
NKX3-1-202ENST00000523261 ARPC2O15144 300 aa10.32□□□□□ -0.76
NKX3-1-202ENST00000523261 ORC5O43913 435 aa10.32□□□□□ -0.76
NKX3-1-202ENST00000523261 AIREO43918 545 aa10.32□□□□□ -0.76
NKX3-1-202ENST00000523261 CDK5Q00535 292 aa10.32□□□□□ -0.76
NKX3-1-202ENST00000523261 RPEL1Q2QD12 228 aa10.32□□□□□ -0.76
NKX3-1-202ENST00000523261 DEFB135Q30KP9 77 aa10.32□□□□□ -0.76
NKX3-1-202ENST00000523261 ELP2Q6IA86 826 aa10.32□□□□□ -0.76
NKX3-1-202ENST00000523261 SLC16A13Q7RTY0 426 aa10.32□□□□□ -0.76
NKX3-1-202ENST00000523261 SLC35F2Q8IXU6 374 aa10.32□□□□□ -0.76
NKX3-1-202ENST00000523261 PRSS35Q8N3Z0 413 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms