RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 OR4D10Q8NGI6 311 aa10.81□□□□□ -0.68
CPNE3-205ENST00000522240 ENKURQ8TC29 256 aa10.81□□□□□ -0.68
CPNE3-205ENST00000522240 MRGPRDQ8TDS7 321 aa10.81□□□□□ -0.68
CPNE3-205ENST00000522240 CHPT1Q8WUD6 406 aa10.81□□□□□ -0.68
CPNE3-205ENST00000522240 CCDC107Q8WV48 283 aa10.81□□□□□ -0.68
CPNE3-205ENST00000522240 RAB39BQ96DA2 213 aa10.81□□□□□ -0.68
CPNE3-205ENST00000522240 PRRT1Q99946 306 aa10.81□□□□□ -0.68
CPNE3-205ENST00000522240 TINAGL1Q9GZM7 467 aaPredicted RBP10.81□□□□□ -0.68
CPNE3-205ENST00000522240 DPAGT1Q9H3H5 408 aa10.81□□□□□ -0.68
CPNE3-205ENST00000522240 TAF9BQ9HBM6 251 aa10.81□□□□□ -0.68
CPNE3-205ENST00000522240 MCUBQ9NWR8 336 aa10.81□□□□□ -0.68
CPNE3-205ENST00000522240 TAS2R3Q9NYW6 316 aa10.81□□□□□ -0.68
CPNE3-205ENST00000522240 EHFQ9NZC4 300 aa10.81□□□□□ -0.68
CPNE3-205ENST00000522240 COPZ2Q9P299 210 aa10.81□□□□□ -0.68
CPNE3-205ENST00000522240 CLN8Q9UBY8 286 aa10.81□□□□□ -0.68
CPNE3-205ENST00000522240 UBE2J1Q9Y385 318 aaPredicted RBP10.81□□□□□ -0.68
CPNE3-205ENST00000522240 DSCAML1Q8TD84 2053 aa10.81□□□□□ -0.68
CPNE3-205ENST00000522240 SPG11Q96JI7 2443 aa10.8□□□□□ -0.68
CPNE3-205ENST00000522240 ZNF729A6NN14 1252 aaPredicted RBP10.8□□□□□ -0.68
CPNE3-205ENST00000522240 A8MXK9 166 aa10.8□□□□□ -0.68
CPNE3-205ENST00000522240 C12orf77C9JDV5 145 aa10.8□□□□□ -0.68
CPNE3-205ENST00000522240 PMP2P02689 132 aa10.8□□□□□ -0.68
CPNE3-205ENST00000522240 AMY2AP04746 511 aa10.8□□□□□ -0.68
CPNE3-205ENST00000522240 IFNA6P05013 189 aa10.8□□□□□ -0.68
CPNE3-205ENST00000522240 SCTP09683 121 aa10.8□□□□□ -0.68
CPNE3-205ENST00000522240 ZNF735P0CB33 412 aa10.8□□□□□ -0.68
CPNE3-205ENST00000522240 GSTT2P0CG29 244 aa10.8□□□□□ -0.68
CPNE3-205ENST00000522240 SLC25A16P16260 332 aa10.8□□□□□ -0.68
CPNE3-205ENST00000522240 GZMHP20718 246 aa10.8□□□□□ -0.68
CPNE3-205ENST00000522240 RPL31P62899 125 aaKnown RBP10.8□□□□□ -0.68
CPNE3-205ENST00000522240 HERPUD1Q15011 391 aa10.8□□□□□ -0.68
CPNE3-205ENST00000522240 OXA1LQ15070 435 aa10.8□□□□□ -0.68
CPNE3-205ENST00000522240 FAAP20Q6NZ36 180 aa10.8□□□□□ -0.68
CPNE3-205ENST00000522240 ZNF782Q6ZMW2 699 aaPredicted RBP10.8□□□□□ -0.68
CPNE3-205ENST00000522240 TCF23Q7RTU1 214 aa10.8□□□□□ -0.68
CPNE3-205ENST00000522240 FGFRL1Q8N441 504 aa10.8□□□□□ -0.68
CPNE3-205ENST00000522240 ZNF565Q8N9K5 539 aa10.8□□□□□ -0.68
CPNE3-205ENST00000522240 OR56B4Q8NH76 319 aa10.8□□□□□ -0.68
CPNE3-205ENST00000522240 CLDND2Q8NHS1 167 aa10.8□□□□□ -0.68
CPNE3-205ENST00000522240 C8orf46Q8TAG6 207 aa10.8□□□□□ -0.68
CPNE3-205ENST00000522240 H1FXQ92522 213 aaKnown RBP10.8□□□□□ -0.68
CPNE3-205ENST00000522240 DCTN5Q9BTE1 182 aa10.8□□□□□ -0.68
CPNE3-205ENST00000522240 LINC00574Q9H8X3 128 aa10.8□□□□□ -0.68
CPNE3-205ENST00000522240 SCP2D1Q9UJQ7 156 aa10.8□□□□□ -0.68
CPNE3-205ENST00000522240 FAM240BA0A1B0GVZ2 78 aa10.79□□□□□ -0.68
CPNE3-205ENST00000522240 C15orf65H3BRN8 121 aa10.79□□□□□ -0.68
CPNE3-205ENST00000522240 SPINT2O43291 252 aa10.79□□□□□ -0.68
CPNE3-205ENST00000522240 HBZP02008 142 aa10.79□□□□□ -0.68
CPNE3-205ENST00000522240 OR5H8P0DN80 308 aa10.79□□□□□ -0.68
CPNE3-205ENST00000522240 CGB3P0DN86 165 aa10.79□□□□□ -0.68
CPNE3-205ENST00000522240 CGB7P0DN87 165 aa10.79□□□□□ -0.68
CPNE3-205ENST00000522240 SSTR5P35346 364 aa10.79□□□□□ -0.68
CPNE3-205ENST00000522240 GNB2P62879 340 aa10.79□□□□□ -0.68
CPNE3-205ENST00000522240 HTD2P86397 168 aa10.79□□□□□ -0.68
CPNE3-205ENST00000522240 RBMS2Q15434 407 aaKnown RBP10.79□□□□□ -0.68
CPNE3-205ENST00000522240 TRIM16LQ309B1 348 aa10.79□□□□□ -0.68
CPNE3-205ENST00000522240 PLA1AQ53H76 456 aa10.79□□□□□ -0.68
CPNE3-205ENST00000522240 ESCO2Q56NI9 601 aa10.79□□□□□ -0.68
CPNE3-205ENST00000522240 SAMD5Q5TGI4 173 aa10.79□□□□□ -0.68
CPNE3-205ENST00000522240 NRARPQ7Z6K4 114 aa10.79□□□□□ -0.68
CPNE3-205ENST00000522240 LHFPL1Q86WI0 220 aa10.79□□□□□ -0.68
CPNE3-205ENST00000522240 DUSP18Q8NEJ0 188 aa10.79□□□□□ -0.68
CPNE3-205ENST00000522240 OR51S1Q8NGJ8 323 aa10.79□□□□□ -0.68
CPNE3-205ENST00000522240 SLC6A7Q99884 636 aa10.79□□□□□ -0.68
CPNE3-205ENST00000522240 SSBP3Q9BWW4 388 aaPredicted RBP10.79□□□□□ -0.68
CPNE3-205ENST00000522240 GAL3ST2Q9H3Q3 398 aa10.79□□□□□ -0.68
CPNE3-205ENST00000522240 C19orf12Q9NSK7 152 aa10.79□□□□□ -0.68
CPNE3-205ENST00000522240 CALYQ9NYX4 217 aa10.79□□□□□ -0.68
CPNE3-205ENST00000522240 MED13LQ71F56 2210 aa10.78□□□□□ -0.68
CPNE3-205ENST00000522240 IGHV4-30-2A0A087WSY4 118 aa10.78□□□□□ -0.68
CPNE3-205ENST00000522240 TRBV6-7A0A0A0MS04 114 aa10.78□□□□□ -0.68
CPNE3-205ENST00000522240 TRAV39A0A0B4J263 110 aa10.78□□□□□ -0.68
CPNE3-205ENST00000522240 IGKV1-6A0A0C4DH72 117 aa10.78□□□□□ -0.68
CPNE3-205ENST00000522240 F2RL2O00254 374 aa10.78□□□□□ -0.68
CPNE3-205ENST00000522240 IL2RGP31785 369 aa10.78□□□□□ -0.68
CPNE3-205ENST00000522240 ECI1P42126 302 aa10.78□□□□□ -0.68
CPNE3-205ENST00000522240 LMO4P61968 165 aa10.78□□□□□ -0.68
CPNE3-205ENST00000522240 TSPAN5P62079 268 aa10.78□□□□□ -0.68
CPNE3-205ENST00000522240 ZNF273Q14593 569 aa10.78□□□□□ -0.68
CPNE3-205ENST00000522240 CLEC12BQ2HXU8 276 aa10.78□□□□□ -0.68
CPNE3-205ENST00000522240 IGSF11Q5DX21 431 aa10.78□□□□□ -0.68
CPNE3-205ENST00000522240 CD276Q5ZPR3 534 aa10.78□□□□□ -0.68
CPNE3-205ENST00000522240 ZNF660Q6AZW8 331 aaPredicted RBP10.78□□□□□ -0.68
CPNE3-205ENST00000522240 PRSS57Q6UWY2 283 aa10.78□□□□□ -0.68
CPNE3-205ENST00000522240 OR10A7Q8NGE5 316 aa10.78□□□□□ -0.68
CPNE3-205ENST00000522240 FAM216AQ8WUB2 273 aa10.78□□□□□ -0.68
CPNE3-205ENST00000522240 GIMAP1Q8WWP7 306 aa10.78□□□□□ -0.68
CPNE3-205ENST00000522240 ARL11Q969Q4 196 aa10.78□□□□□ -0.68
CPNE3-205ENST00000522240 GALMQ96C23 342 aa10.78□□□□□ -0.68
CPNE3-205ENST00000522240 KIRREL1Q96J84 757 aa10.78□□□□□ -0.68
CPNE3-205ENST00000522240 ZNF714Q96N38 554 aa10.78□□□□□ -0.68
CPNE3-205ENST00000522240 SLC25A21Q9BQT8 299 aaPredicted RBP10.78□□□□□ -0.68
CPNE3-205ENST00000522240 TOLLIPQ9H0E2 274 aa10.78□□□□□ -0.68
CPNE3-205ENST00000522240 NARFLQ9H6Q4 476 aa10.78□□□□□ -0.68
CPNE3-205ENST00000522240 RPUSD1Q9UJJ7 312 aaKnown RBP10.78□□□□□ -0.68
CPNE3-205ENST00000522240 JPT1Q9UK76 154 aa10.78□□□□□ -0.68
CPNE3-205ENST00000522240 NIPBLQ6KC79 2804 aaeCLIP10.78□□□□□ -0.68
CPNE3-205ENST00000522240 KBTBD11-OT1A0A1B0GTJ5 212 aa10.77□□□□□ -0.69
CPNE3-205ENST00000522240 A0A1W2PPH5 198 aa10.77□□□□□ -0.69
CPNE3-205ENST00000522240 SDCBPO00560 298 aaPredicted RBP10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms