RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 ZNF2Q9BSG1 426 aaPredicted RBP17.67■□□□□ 0.42
R3HCC1-208ENST00000522012 CABLES2Q9BTV7 478 aa17.67■□□□□ 0.42
R3HCC1-208ENST00000522012 TMPRSS13Q9BYE2 586 aa17.67■□□□□ 0.42
R3HCC1-208ENST00000522012 CALYQ9NYX4 217 aa17.67■□□□□ 0.42
R3HCC1-208ENST00000522012 LPAR3Q9UBY5 353 aa17.67■□□□□ 0.42
R3HCC1-208ENST00000522012 LINC00312Q9Y6C7 94 aa17.67■□□□□ 0.42
R3HCC1-208ENST00000522012 IGHV4-30-2A0A087WSY4 118 aa17.66■□□□□ 0.42
R3HCC1-208ENST00000522012 C15orf65H3BRN8 121 aa17.66■□□□□ 0.42
R3HCC1-208ENST00000522012 IGHV2-5P01817 119 aa17.66■□□□□ 0.42
R3HCC1-208ENST00000522012 FCGR2CP31995 323 aa17.66■□□□□ 0.42
R3HCC1-208ENST00000522012 ZNF273Q14593 569 aa17.66■□□□□ 0.42
R3HCC1-208ENST00000522012 LRRC75A-AS1Q8N1F1 130 aa17.66■□□□□ 0.42
R3HCC1-208ENST00000522012 SSBP3Q9BWW4 388 aaPredicted RBP17.66■□□□□ 0.42
R3HCC1-208ENST00000522012 SLC2A8Q9NY64 477 aa17.66■□□□□ 0.42
R3HCC1-208ENST00000522012 SLC23A1Q9UHI7 598 aa17.66■□□□□ 0.42
R3HCC1-208ENST00000522012 UBE2J1Q9Y385 318 aaPredicted RBP17.66■□□□□ 0.42
R3HCC1-208ENST00000522012 FBN2P35556 2912 aa17.65■□□□□ 0.42
R3HCC1-208ENST00000522012 TRBV23-1A0A0A0MS06 115 aa17.65■□□□□ 0.42
R3HCC1-208ENST00000522012 KBTBD11-OT1A0A1B0GTJ5 212 aa17.65■□□□□ 0.42
R3HCC1-208ENST00000522012 VWC2LB2RUY7 222 aa17.65■□□□□ 0.42
R3HCC1-208ENST00000522012 HSPA12AO43301 675 aa17.65■□□□□ 0.42
R3HCC1-208ENST00000522012 TCRBP04435 133 aa17.65■□□□□ 0.42
R3HCC1-208ENST00000522012 CGB3P0DN86 165 aa17.65■□□□□ 0.42
R3HCC1-208ENST00000522012 CGB7P0DN87 165 aa17.65■□□□□ 0.42
R3HCC1-208ENST00000522012 NFYAP23511 347 aaPredicted RBP17.65■□□□□ 0.42
R3HCC1-208ENST00000522012 LTC4SQ16873 150 aa17.65■□□□□ 0.42
R3HCC1-208ENST00000522012 PLET1Q6UQ28 207 aa17.65■□□□□ 0.42
R3HCC1-208ENST00000522012 DHRS11Q6UWP2 260 aa17.65■□□□□ 0.42
R3HCC1-208ENST00000522012 TERB2Q8NHR7 220 aa17.65■□□□□ 0.42
R3HCC1-208ENST00000522012 MBD6Q96DN6 1003 aa17.65■□□□□ 0.42
R3HCC1-208ENST00000522012 OR1A1Q9P1Q5 309 aa17.65■□□□□ 0.42
R3HCC1-208ENST00000522012 COPZ2Q9P299 210 aa17.65■□□□□ 0.42
R3HCC1-208ENST00000522012 OPN4Q9UHM6 478 aa17.65■□□□□ 0.42
R3HCC1-208ENST00000522012 TRBV6-7A0A0A0MS04 114 aa17.64■□□□□ 0.41
R3HCC1-208ENST00000522012 ZNF729A6NN14 1252 aaPredicted RBP17.64■□□□□ 0.41
R3HCC1-208ENST00000522012 OMGP23515 440 aa17.64■□□□□ 0.41
R3HCC1-208ENST00000522012 LMO4P61968 165 aa17.64■□□□□ 0.41
R3HCC1-208ENST00000522012 RBMS2Q15434 407 aaKnown RBP17.64■□□□□ 0.41
R3HCC1-208ENST00000522012 C17orf58Q2M2W7 97 aa17.64■□□□□ 0.41
R3HCC1-208ENST00000522012 OR52L2PQ8NGH6 319 aa17.64■□□□□ 0.41
R3HCC1-208ENST00000522012 GIMAP1Q8WWP7 306 aa17.64■□□□□ 0.41
R3HCC1-208ENST00000522012 NINJ1Q92982 152 aa17.64■□□□□ 0.41
R3HCC1-208ENST00000522012 RAB9BQ9NP90 201 aa17.64■□□□□ 0.41
R3HCC1-208ENST00000522012 TAS2R3Q9NYW6 316 aa17.64■□□□□ 0.41
R3HCC1-208ENST00000522012 AKAP6Q13023 2319 aa17.63■□□□□ 0.41
R3HCC1-208ENST00000522012 NDUFB6O95139 128 aa17.63■□□□□ 0.41
R3HCC1-208ENST00000522012 CCL3L1P16619 93 aa17.63■□□□□ 0.41
R3HCC1-208ENST00000522012 ZBTB25P24278 435 aa17.63■□□□□ 0.41
R3HCC1-208ENST00000522012 CEACAM6P40199 344 aa17.63■□□□□ 0.41
R3HCC1-208ENST00000522012 ZNF660Q6AZW8 331 aaPredicted RBP17.63■□□□□ 0.41
R3HCC1-208ENST00000522012 OR13C8Q8NGS7 320 aa17.63■□□□□ 0.41
R3HCC1-208ENST00000522012 RAB39BQ96DA2 213 aa17.63■□□□□ 0.41
R3HCC1-208ENST00000522012 ZNF714Q96N38 554 aa17.63■□□□□ 0.41
R3HCC1-208ENST00000522012 GAL3ST2Q9H3Q3 398 aa17.63■□□□□ 0.41
R3HCC1-208ENST00000522012 OR2S2Q9NQN1 319 aa17.63■□□□□ 0.41
R3HCC1-208ENST00000522012 NUDT15Q9NV35 164 aa17.63■□□□□ 0.41
R3HCC1-208ENST00000522012 ZNF69Q9UC07 566 aa17.63■□□□□ 0.41
R3HCC1-208ENST00000522012 RPUSD1Q9UJJ7 312 aaKnown RBP17.63■□□□□ 0.41
R3HCC1-208ENST00000522012 NUBP2Q9Y5Y2 271 aa17.63■□□□□ 0.41
R3HCC1-208ENST00000522012 TRAV6A0A075B6T7 132 aa17.62■□□□□ 0.41
R3HCC1-208ENST00000522012 LOC105371242A0A075B767 164 aa17.62■□□□□ 0.41
R3HCC1-208ENST00000522012 IGHV4-61A0A0C4DH41 118 aa17.62■□□□□ 0.41
R3HCC1-208ENST00000522012 AADACP22760 399 aa17.62■□□□□ 0.41
R3HCC1-208ENST00000522012 SLC25A21Q9BQT8 299 aaPredicted RBP17.62■□□□□ 0.41
R3HCC1-208ENST00000522012 FLVCR2Q9UPI3 526 aa17.62■□□□□ 0.41
R3HCC1-208ENST00000522012 IGHV3-43A0A0B4J1X8 118 aa17.62■□□□□ 0.41
R3HCC1-208ENST00000522012 PPIAL4CA0A0B4J2A2 164 aa17.62■□□□□ 0.41
R3HCC1-208ENST00000522012 FAM172BPA6NC97 362 aa17.62■□□□□ 0.41
R3HCC1-208ENST00000522012 OR5H14A6NHG9 310 aa17.62■□□□□ 0.41
R3HCC1-208ENST00000522012 DIRAS3O95661 229 aa17.62■□□□□ 0.41
R3HCC1-208ENST00000522012 HEXAP06865 529 aa17.62■□□□□ 0.41
R3HCC1-208ENST00000522012 ZNF728P0DKX0 622 aa17.62■□□□□ 0.41
R3HCC1-208ENST00000522012 PPIAL4GP0DN37 164 aa17.62■□□□□ 0.41
R3HCC1-208ENST00000522012 IGHV3-43DP0DP04 118 aa17.62■□□□□ 0.41
R3HCC1-208ENST00000522012 FXYD4P59646 89 aa17.62■□□□□ 0.41
R3HCC1-208ENST00000522012 HERV-K104P61576 105 aa17.62■□□□□ 0.41
R3HCC1-208ENST00000522012 HTD2P86397 168 aa17.62■□□□□ 0.41
R3HCC1-208ENST00000522012 AADACL3Q5VUY0 350 aa17.62■□□□□ 0.41
R3HCC1-208ENST00000522012 CD276Q5ZPR3 534 aa17.62■□□□□ 0.41
R3HCC1-208ENST00000522012 FAM53AQ6NSI3 398 aaPredicted RBP17.62■□□□□ 0.41
R3HCC1-208ENST00000522012 LHFPL1Q86WI0 220 aa17.62■□□□□ 0.41
R3HCC1-208ENST00000522012 H1FOOQ8IZA3 346 aaPredicted RBP17.62■□□□□ 0.41
R3HCC1-208ENST00000522012 OR10V1Q8NGI7 309 aa17.62■□□□□ 0.41
R3HCC1-208ENST00000522012 MRGPRFQ96AM1 343 aa17.62■□□□□ 0.41
R3HCC1-208ENST00000522012 C20orf85Q9H1P6 137 aa17.62■□□□□ 0.41
R3HCC1-208ENST00000522012 CRYBG3Q68DQ2 2970 aa17.61■□□□□ 0.41
R3HCC1-208ENST00000522012 VGLL3A8MV65 326 aa17.61■□□□□ 0.41
R3HCC1-208ENST00000522012 C22orf46C9J442 243 aa17.61■□□□□ 0.41
R3HCC1-208ENST00000522012 NPIPB11E5RHQ5 1161 aa17.61■□□□□ 0.41
R3HCC1-208ENST00000522012 F2RL2O00254 374 aa17.61■□□□□ 0.41
R3HCC1-208ENST00000522012 PPYP01298 95 aa17.61■□□□□ 0.41
R3HCC1-208ENST00000522012 SLC25A16P16260 332 aa17.61■□□□□ 0.41
R3HCC1-208ENST00000522012 FPR2P25090 351 aa17.61■□□□□ 0.41
R3HCC1-208ENST00000522012 RAB25P57735 213 aa17.61■□□□□ 0.41
R3HCC1-208ENST00000522012 GNMTQ14749 295 aa17.61■□□□□ 0.41
R3HCC1-208ENST00000522012 PRAMEF5Q5TYX0 476 aa17.61■□□□□ 0.41
R3HCC1-208ENST00000522012 MARCH1Q8TCQ1 289 aa17.61■□□□□ 0.41
R3HCC1-208ENST00000522012 UPRTQ96BW1 309 aa17.61■□□□□ 0.41
R3HCC1-208ENST00000522012 RDH8Q9NYR8 311 aa17.61■□□□□ 0.41
R3HCC1-208ENST00000522012 IDI2-AS1Q9NZ38 188 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms