RNA–Protein interactions for RNA: ENST00000521049.5

TRAM1-204, Transcript of translocation associated membrane protein 1, humanhuman

TSL 5

Gene TRAM1, Length 872 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-204ENST00000521049 RAB3AP20336 220 aa12.71□□□□□ -0.37
TRAM1-204ENST00000521049 FASP25445 335 aa12.71□□□□□ -0.37
TRAM1-204ENST00000521049 STEAP3Q658P3 488 aa12.71□□□□□ -0.37
TRAM1-204ENST00000521049 FAM53AQ6NSI3 398 aaPredicted RBP12.71□□□□□ -0.37
TRAM1-204ENST00000521049 ZNF529Q6P280 563 aa12.71□□□□□ -0.37
TRAM1-204ENST00000521049 SATL1Q86VE3 508 aa12.71□□□□□ -0.37
TRAM1-204ENST00000521049 OR6Q1Q8NGQ2 317 aa12.71□□□□□ -0.37
TRAM1-204ENST00000521049 DLX4Q92988 240 aaPredicted RBP12.71□□□□□ -0.37
TRAM1-204ENST00000521049 SLC7A6OSQ96CW6 309 aaPredicted RBP12.71□□□□□ -0.37
TRAM1-204ENST00000521049 MRPL48Q96GC5 212 aaKnown RBP12.71□□□□□ -0.37
TRAM1-204ENST00000521049 C4orf36Q96KX1 117 aa12.71□□□□□ -0.37
TRAM1-204ENST00000521049 OR5B12Q96R08 314 aa12.71□□□□□ -0.37
TRAM1-204ENST00000521049 MYCBPQ99417 103 aaPredicted RBP12.71□□□□□ -0.37
TRAM1-204ENST00000521049 LYSTQ99698 3801 aa12.71□□□□□ -0.37
TRAM1-204ENST00000521049 EDA2RQ9HAV5 297 aa12.71□□□□□ -0.37
TRAM1-204ENST00000521049 ZNF581Q9P0T4 197 aa12.71□□□□□ -0.37
TRAM1-204ENST00000521049 DHDHQ9UQ10 334 aa12.71□□□□□ -0.37
TRAM1-204ENST00000521049 WSB1Q9Y6I7 421 aa12.71□□□□□ -0.37
TRAM1-204ENST00000521049 SORL1Q92673 2214 aa12.71□□□□□ -0.37
TRAM1-204ENST00000521049 IGHV3-43A0A0B4J1X8 118 aa12.7□□□□□ -0.38
TRAM1-204ENST00000521049 MAGEA13PA6NCF6 341 aa12.7□□□□□ -0.38
TRAM1-204ENST00000521049 TRIM64CA6NLI5 447 aa12.7□□□□□ -0.38
TRAM1-204ENST00000521049 TMEM212A6NML5 194 aa12.7□□□□□ -0.38
TRAM1-204ENST00000521049 G3V318 75 aa12.7□□□□□ -0.38
TRAM1-204ENST00000521049 LDLRAD4O15165 306 aa12.7□□□□□ -0.38
TRAM1-204ENST00000521049 OR7C1O76099 320 aaPredicted RBP12.7□□□□□ -0.38
TRAM1-204ENST00000521049 MT-ND4P03905 459 aa12.7□□□□□ -0.38
TRAM1-204ENST00000521049 IGHV3-43DP0DP04 118 aa12.7□□□□□ -0.38
TRAM1-204ENST00000521049 ZNF134P52741 427 aa12.7□□□□□ -0.38
TRAM1-204ENST00000521049 ACSM6Q6P461 480 aa12.7□□□□□ -0.38
TRAM1-204ENST00000521049 LINC00596Q86U02 117 aa12.7□□□□□ -0.38
TRAM1-204ENST00000521049 MINDY2Q8NBR6 621 aa12.7□□□□□ -0.38
TRAM1-204ENST00000521049 ZNF439Q8NDP4 499 aa12.7□□□□□ -0.38
TRAM1-204ENST00000521049 OR52N1Q8NH53 320 aa12.7□□□□□ -0.38
TRAM1-204ENST00000521049 CCDC107Q8WV48 283 aa12.7□□□□□ -0.38
TRAM1-204ENST00000521049 ISOC1Q96CN7 298 aa12.7□□□□□ -0.38
TRAM1-204ENST00000521049 IL36GQ9NZH8 169 aa12.7□□□□□ -0.38
TRAM1-204ENST00000521049 NKX1-2Q9UD57 310 aaPredicted RBP12.7□□□□□ -0.38
TRAM1-204ENST00000521049 EXOGQ9Y2C4 368 aaKnown RBP12.7□□□□□ -0.38
TRAM1-204ENST00000521049 SLC31A2O15432 143 aa12.69□□□□□ -0.38
TRAM1-204ENST00000521049 SLC2A2P11168 524 aaPredicted RBP12.69□□□□□ -0.38
TRAM1-204ENST00000521049 VEGFCP49767 419 aa12.69□□□□□ -0.38
TRAM1-204ENST00000521049 RBM11P57052 281 aaKnown RBP12.69□□□□□ -0.38
TRAM1-204ENST00000521049 GABPB1Q06547 395 aaPredicted RBP12.69□□□□□ -0.38
TRAM1-204ENST00000521049 MRPL28Q13084 256 aaKnown RBP12.69□□□□□ -0.38
TRAM1-204ENST00000521049 MMDQ15546 238 aa12.69□□□□□ -0.38
TRAM1-204ENST00000521049 TMEM30BQ3MIR4 351 aa12.69□□□□□ -0.38
TRAM1-204ENST00000521049 CT45A1Q5HYN5 189 aa12.69□□□□□ -0.38
TRAM1-204ENST00000521049 MEDAGQ5VYS4 303 aa12.69□□□□□ -0.38
TRAM1-204ENST00000521049 LPCAT4Q643R3 524 aa12.69□□□□□ -0.38
TRAM1-204ENST00000521049 AMIGO2Q86SJ2 522 aa12.69□□□□□ -0.38
TRAM1-204ENST00000521049 SYS1Q8N2H4 156 aa12.69□□□□□ -0.38
TRAM1-204ENST00000521049 OR5AK2Q8NH90 309 aa12.69□□□□□ -0.38
TRAM1-204ENST00000521049 CT45A3Q8NHU0 189 aa12.69□□□□□ -0.38
TRAM1-204ENST00000521049 UBALD1Q8TB05 177 aa12.69□□□□□ -0.38
TRAM1-204ENST00000521049 RBMXL1Q96E39 390 aaKnown RBP12.69□□□□□ -0.38
TRAM1-204ENST00000521049 FAM192AQ9GZU8 254 aa12.69□□□□□ -0.38
TRAM1-204ENST00000521049 METTL9Q9H1A3 318 aa12.69□□□□□ -0.38
TRAM1-204ENST00000521049 RAB9BQ9NP90 201 aa12.69□□□□□ -0.38
TRAM1-204ENST00000521049 TRAV41A0A0B4J266 112 aa12.68□□□□□ -0.38
TRAM1-204ENST00000521049 A8MZ25 164 aa12.68□□□□□ -0.38
TRAM1-204ENST00000521049 LINC01619G3V211 115 aa12.68□□□□□ -0.38
TRAM1-204ENST00000521049 GEMIN2O14893 280 aaKnown RBP12.68□□□□□ -0.38
TRAM1-204ENST00000521049 LANCL1O43813 399 aa12.68□□□□□ -0.38
TRAM1-204ENST00000521049 HLA-DRB1P01911 266 aa12.68□□□□□ -0.38
TRAM1-204ENST00000521049 CSTBP04080 98 aaKnown RBP12.68□□□□□ -0.38
TRAM1-204ENST00000521049 SNRPGP62308 76 aaKnown RBP12.68□□□□□ -0.38
TRAM1-204ENST00000521049 LSAMPQ13449 338 aa12.68□□□□□ -0.38
TRAM1-204ENST00000521049 MPV17LQ2QL34 196 aa12.68□□□□□ -0.38
TRAM1-204ENST00000521049 ZNF497Q6ZNH5 498 aa12.68□□□□□ -0.38
TRAM1-204ENST00000521049 OR51A2Q8NGJ7 313 aa12.68□□□□□ -0.38
TRAM1-204ENST00000521049 TOLLIPQ9H0E2 274 aa12.68□□□□□ -0.38
TRAM1-204ENST00000521049 TPSG1Q9NRR2 321 aa12.68□□□□□ -0.38
TRAM1-204ENST00000521049 IMPAD1Q9NX62 359 aa12.68□□□□□ -0.38
TRAM1-204ENST00000521049 ING4Q9UNL4 249 aa12.68□□□□□ -0.38
TRAM1-204ENST00000521049 AP4S1Q9Y587 144 aa12.68□□□□□ -0.38
TRAM1-204ENST00000521049 STARD9Q9P2P6 4700 aa12.67□□□□□ -0.38
TRAM1-204ENST00000521049 IGHV7-81A0A0B4J1V7 117 aa12.67□□□□□ -0.38
TRAM1-204ENST00000521049 SNTNA6NMZ2 147 aa12.67□□□□□ -0.38
TRAM1-204ENST00000521049 ATP6V0E1O15342 81 aa12.67□□□□□ -0.38
TRAM1-204ENST00000521049 SPINT2O43291 252 aa12.67□□□□□ -0.38
TRAM1-204ENST00000521049 ATP5HO75947 161 aa12.67□□□□□ -0.38
TRAM1-204ENST00000521049 CDRT1O95170 752 aa12.67□□□□□ -0.38
TRAM1-204ENST00000521049 OR8U9P0C7N5 309 aa12.67□□□□□ -0.38
TRAM1-204ENST00000521049 MYF6P23409 242 aa12.67□□□□□ -0.38
TRAM1-204ENST00000521049 RASSF2P50749 326 aa12.67□□□□□ -0.38
TRAM1-204ENST00000521049 ATAD3CQ5T2N8 411 aa12.67□□□□□ -0.38
TRAM1-204ENST00000521049 LHFPL3Q86UP9 236 aa12.67□□□□□ -0.38
TRAM1-204ENST00000521049 Q8N1Y9 231 aa12.67□□□□□ -0.38
TRAM1-204ENST00000521049 STX19Q8N4C7 294 aa12.67□□□□□ -0.38
TRAM1-204ENST00000521049 TSEN15Q8WW01 171 aaKnown RBP12.67□□□□□ -0.38
TRAM1-204ENST00000521049 PDCD1LG2Q9BQ51 273 aa12.67□□□□□ -0.38
TRAM1-204ENST00000521049 ALG8Q9BVK2 526 aa12.67□□□□□ -0.38
TRAM1-204ENST00000521049 JAM3Q9BX67 310 aa12.67□□□□□ -0.38
TRAM1-204ENST00000521049 ALX4Q9H161 411 aaPredicted RBP12.67□□□□□ -0.38
TRAM1-204ENST00000521049 ISG20L2Q9H9L3 353 aaKnown RBP12.67□□□□□ -0.38
TRAM1-204ENST00000521049 C19orf73Q9NVV2 129 aa12.67□□□□□ -0.38
TRAM1-204ENST00000521049 PAK1IP1Q9NWT1 392 aaPredicted RBP12.67□□□□□ -0.38
TRAM1-204ENST00000521049 GNG12Q9UBI6 72 aa12.67□□□□□ -0.38
TRAM1-204ENST00000521049 ERGIC3Q9Y282 383 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms