RNA–Protein interactions for RNA: ENST00000520520.1

CTNNA1-223, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 484 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-223ENST00000520520 KIAA1456Q9P272 454 aa7.41□□□□□ -1.22
CTNNA1-223ENST00000520520 RNF150Q9ULK6 438 aa7.41□□□□□ -1.22
CTNNA1-223ENST00000520520 POLEQ07864 2286 aa7.4□□□□□ -1.22
CTNNA1-223ENST00000520520 A0A087WWC5 75 aa7.4□□□□□ -1.22
CTNNA1-223ENST00000520520 CXorf65A6NEN9 183 aa7.4□□□□□ -1.22
CTNNA1-223ENST00000520520 B4DEV8 164 aa7.4□□□□□ -1.22
CTNNA1-223ENST00000520520 AP4M1O00189 453 aa7.4□□□□□ -1.22
CTNNA1-223ENST00000520520 TNFSF11O14788 317 aa7.4□□□□□ -1.22
CTNNA1-223ENST00000520520 GEMIN2O14893 280 aaKnown RBP7.4□□□□□ -1.22
CTNNA1-223ENST00000520520 MPPED1O15442 326 aa7.4□□□□□ -1.22
CTNNA1-223ENST00000520520 SPRY1O43609 319 aaPredicted RBP7.4□□□□□ -1.22
CTNNA1-223ENST00000520520 ANGPTL7O43827 346 aa7.4□□□□□ -1.22
CTNNA1-223ENST00000520520 EIF3GO75821 320 aaKnown RBP eCLIP7.4□□□□□ -1.22
CTNNA1-223ENST00000520520 OR2C1O95371 312 aa7.4□□□□□ -1.22
CTNNA1-223ENST00000520520 IFNA1P01562 189 aa7.4□□□□□ -1.22
CTNNA1-223ENST00000520520 CCL3P10147 92 aa7.4□□□□□ -1.22
CTNNA1-223ENST00000520520 ZNF32P17041 273 aa7.4□□□□□ -1.22
CTNNA1-223ENST00000520520 AADACP22760 399 aa7.4□□□□□ -1.22
CTNNA1-223ENST00000520520 OPRM1P35372 400 aa7.4□□□□□ -1.22
CTNNA1-223ENST00000520520 MAS1LP35410 378 aa7.4□□□□□ -1.22
CTNNA1-223ENST00000520520 CARD18P57730 90 aa7.4□□□□□ -1.22
CTNNA1-223ENST00000520520 MLF1P58340 268 aa7.4□□□□□ -1.22
CTNNA1-223ENST00000520520 SNRPEP62304 92 aaKnown RBP7.4□□□□□ -1.22
CTNNA1-223ENST00000520520 RPL23AP62750 156 aaKnown RBP7.4□□□□□ -1.22
CTNNA1-223ENST00000520520 IL24Q13007 206 aa7.4□□□□□ -1.22
CTNNA1-223ENST00000520520 HIKESHIQ53FT3 197 aa7.4□□□□□ -1.22
CTNNA1-223ENST00000520520 PHYHD1Q5SRE7 291 aa7.4□□□□□ -1.22
CTNNA1-223ENST00000520520 ZNF774Q6NX45 483 aa7.4□□□□□ -1.22
CTNNA1-223ENST00000520520 MEX3BQ6ZN04 569 aaKnown RBP7.4□□□□□ -1.22
CTNNA1-223ENST00000520520 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.4□□□□□ -1.22
CTNNA1-223ENST00000520520 LYZL2Q7Z4W2 148 aa7.4□□□□□ -1.22
CTNNA1-223ENST00000520520 RPS19BP1Q86WX3 136 aaKnown RBP7.4□□□□□ -1.22
CTNNA1-223ENST00000520520 MKXQ8IYA7 352 aa7.4□□□□□ -1.22
CTNNA1-223ENST00000520520 SLC35G3Q8N808 338 aa7.4□□□□□ -1.22
CTNNA1-223ENST00000520520 HSD17B11Q8NBQ5 300 aa7.4□□□□□ -1.22
CTNNA1-223ENST00000520520 OR2G3Q8NGZ4 309 aa7.4□□□□□ -1.22
CTNNA1-223ENST00000520520 CPNE4Q96A23 557 aaPredicted RBP7.4□□□□□ -1.22
CTNNA1-223ENST00000520520 TMEM45BQ96B21 275 aa7.4□□□□□ -1.22
CTNNA1-223ENST00000520520 IMMP1LQ96LU5 166 aa7.4□□□□□ -1.22
CTNNA1-223ENST00000520520 TMEM56Q96MV1 263 aa7.4□□□□□ -1.22
CTNNA1-223ENST00000520520 FOXB1Q99853 325 aa7.4□□□□□ -1.22
CTNNA1-223ENST00000520520 OR2H1Q9GZK4 316 aa7.4□□□□□ -1.22
CTNNA1-223ENST00000520520 TMPRSS5Q9H3S3 457 aa7.4□□□□□ -1.22
CTNNA1-223ENST00000520520 LYRM2Q9NU23 88 aaPredicted RBP7.4□□□□□ -1.22
CTNNA1-223ENST00000520520 ABI3Q9P2A4 366 aa7.4□□□□□ -1.22
CTNNA1-223ENST00000520520 MRPS18CQ9Y3D5 142 aaKnown RBP7.4□□□□□ -1.22
CTNNA1-223ENST00000520520 TMEM56-RWDD3S4R434 201 aa7.4□□□□□ -1.22
CTNNA1-223ENST00000520520 CNTRLQ7Z7A1 2325 aa7.4□□□□□ -1.23
CTNNA1-223ENST00000520520 IGHV3-15A0A0B4J1V0 119 aa7.39□□□□□ -1.23
CTNNA1-223ENST00000520520 A0A1W2PPH5 198 aa7.39□□□□□ -1.23
CTNNA1-223ENST00000520520 RBFOX3A6NFN3 312 aa7.39□□□□□ -1.23
CTNNA1-223ENST00000520520 A6NLC8 198 aa7.39□□□□□ -1.23
CTNNA1-223ENST00000520520 ZNF732B4DXR9 585 aa7.39□□□□□ -1.23
CTNNA1-223ENST00000520520 E9PLN8 166 aa7.39□□□□□ -1.23
CTNNA1-223ENST00000520520 H0Y980 276 aa7.39□□□□□ -1.23
CTNNA1-223ENST00000520520 MSTNO14793 375 aa7.39□□□□□ -1.23
CTNNA1-223ENST00000520520 OR7C1O76099 320 aaPredicted RBP7.39□□□□□ -1.23
CTNNA1-223ENST00000520520 IFNA5P01569 189 aa7.39□□□□□ -1.23
CTNNA1-223ENST00000520520 HSPB1P04792 205 aaKnown RBP7.39□□□□□ -1.23
CTNNA1-223ENST00000520520 FABP1P07148 127 aa7.39□□□□□ -1.23
CTNNA1-223ENST00000520520 DBHP09172 617 aa7.39□□□□□ -1.23
CTNNA1-223ENST00000520520 COX5BP10606 129 aa7.39□□□□□ -1.23
CTNNA1-223ENST00000520520 SLC25A6P12236 298 aa7.39□□□□□ -1.23
CTNNA1-223ENST00000520520 VDAC1P21796 283 aa7.39□□□□□ -1.23
CTNNA1-223ENST00000520520 ACKR3P25106 362 aa7.39□□□□□ -1.23
CTNNA1-223ENST00000520520 S100A2P29034 98 aa7.39□□□□□ -1.23
CTNNA1-223ENST00000520520 PIGYQ3MUY2 71 aa7.39□□□□□ -1.23
CTNNA1-223ENST00000520520 SP6Q3SY56 376 aa7.39□□□□□ -1.23
CTNNA1-223ENST00000520520 SPIN3Q5JUX0 258 aa7.39□□□□□ -1.23
CTNNA1-223ENST00000520520 SLC25A24Q6NUK1 477 aa7.39□□□□□ -1.23
CTNNA1-223ENST00000520520 MOB1BQ7L9L4 216 aa7.39□□□□□ -1.23
CTNNA1-223ENST00000520520 MRPL21Q7Z2W9 205 aaKnown RBP7.39□□□□□ -1.23
CTNNA1-223ENST00000520520 ZNF611Q8N823 705 aa7.39□□□□□ -1.23
CTNNA1-223ENST00000520520 ZIC4Q8N9L1 334 aa7.39□□□□□ -1.23
CTNNA1-223ENST00000520520 OR5D13Q8NGL4 314 aa7.39□□□□□ -1.23
CTNNA1-223ENST00000520520 OR10G4Q8NGN3 311 aa7.39□□□□□ -1.23
CTNNA1-223ENST00000520520 OR2AE1Q8NHA4 323 aa7.39□□□□□ -1.23
CTNNA1-223ENST00000520520 GTF3AQ92664 365 aaKnown RBP7.39□□□□□ -1.23
CTNNA1-223ENST00000520520 SPSB4Q96A44 273 aa7.39□□□□□ -1.23
CTNNA1-223ENST00000520520 SIGLEC12Q96PQ1 595 aa7.39□□□□□ -1.23
CTNNA1-223ENST00000520520 HIST1H2AAQ96QV6 131 aa7.39□□□□□ -1.23
CTNNA1-223ENST00000520520 ATP5SQ99766 215 aa7.39□□□□□ -1.23
CTNNA1-223ENST00000520520 NIPSNAP3BQ9BS92 247 aa7.39□□□□□ -1.23
CTNNA1-223ENST00000520520 LINC00470Q9BZP3 86 aa7.39□□□□□ -1.23
CTNNA1-223ENST00000520520 CRLF2Q9HC73 371 aa7.39□□□□□ -1.23
CTNNA1-223ENST00000520520 SH2D2AQ9NP31 389 aa7.39□□□□□ -1.23
CTNNA1-223ENST00000520520 BOKQ9UMX3 212 aaPredicted RBP7.39□□□□□ -1.23
CTNNA1-223ENST00000520520 A0A0J9YW62 118 aa7.38□□□□□ -1.23
CTNNA1-223ENST00000520520 C5orf63A6NC05 138 aa7.38□□□□□ -1.23
CTNNA1-223ENST00000520520 ZNF716A6NP11 495 aa7.38□□□□□ -1.23
CTNNA1-223ENST00000520520 TRAPPC2LH3BP13 241 aa7.38□□□□□ -1.23
CTNNA1-223ENST00000520520 DEGS1O15121 323 aa7.38□□□□□ -1.23
CTNNA1-223ENST00000520520 SSSCA1O60232 199 aa7.38□□□□□ -1.23
CTNNA1-223ENST00000520520 ZIC3O60481 467 aa7.38□□□□□ -1.23
CTNNA1-223ENST00000520520 SCAF4O95104 1147 aaKnown RBP7.38□□□□□ -1.23
CTNNA1-223ENST00000520520 CLDN14O95500 239 aa7.38□□□□□ -1.23
CTNNA1-223ENST00000520520 ACAA1P09110 424 aaPredicted RBP7.38□□□□□ -1.23
CTNNA1-223ENST00000520520 WNT2P09544 360 aa7.38□□□□□ -1.23
CTNNA1-223ENST00000520520 B4GALT1P15291 398 aa7.38□□□□□ -1.23
CTNNA1-223ENST00000520520 LMO1P25800 156 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms