RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 RBMXL1Q96E39 390 aaKnown RBP2.46□□□□□ -2.02
SQLE-204ENST00000520493 CCDC42Q96M95 316 aa2.46□□□□□ -2.02
SQLE-204ENST00000520493 GPR82Q96P67 336 aa2.46□□□□□ -2.02
SQLE-204ENST00000520493 MARVELD1Q9BSK0 173 aa2.46□□□□□ -2.02
SQLE-204ENST00000520493 MROQ9BYG7 248 aa2.46□□□□□ -2.02
SQLE-204ENST00000520493 IL37Q9NZH6 218 aa2.46□□□□□ -2.02
SQLE-204ENST00000520493 ZNF337Q9Y3M9 751 aa2.46□□□□□ -2.02
SQLE-204ENST00000520493 DOCK9Q9BZ29 2069 aa2.46□□□□□ -2.02
SQLE-204ENST00000520493 IGLV4-60A0A075B6I1 120 aa2.45□□□□□ -2.02
SQLE-204ENST00000520493 IGHV1-45A0A0A0MS14 117 aa2.45□□□□□ -2.02
SQLE-204ENST00000520493 A0A1W2PQL4 384 aaPredicted RBP2.45□□□□□ -2.02
SQLE-204ENST00000520493 TMEM114B3SHH9 223 aa2.45□□□□□ -2.02
SQLE-204ENST00000520493 ISLRO14498 428 aa2.45□□□□□ -2.02
SQLE-204ENST00000520493 IGHV1-46P01743 117 aa2.45□□□□□ -2.02
SQLE-204ENST00000520493 HLA-DRAP01903 254 aa2.45□□□□□ -2.02
SQLE-204ENST00000520493 IFNA6P05013 189 aa2.45□□□□□ -2.02
SQLE-204ENST00000520493 IFNA16P05015 189 aa2.45□□□□□ -2.02
SQLE-204ENST00000520493 MLNP12872 115 aa2.45□□□□□ -2.02
SQLE-204ENST00000520493 RPS12P25398 132 aaKnown RBP2.45□□□□□ -2.02
SQLE-204ENST00000520493 IDH2P48735 452 aaKnown RBP2.45□□□□□ -2.02
SQLE-204ENST00000520493 CXCR4P61073 352 aa2.45□□□□□ -2.02
SQLE-204ENST00000520493 CCL7P80098 99 aa2.45□□□□□ -2.02
SQLE-204ENST00000520493 BASP1P80723 227 aaKnown RBP2.45□□□□□ -2.02
SQLE-204ENST00000520493 REEP5Q00765 189 aa2.45□□□□□ -2.02
SQLE-204ENST00000520493 ZNF816Q0VGE8 651 aaPredicted RBP2.45□□□□□ -2.02
SQLE-204ENST00000520493 CDC20Q12834 499 aa2.45□□□□□ -2.02
SQLE-204ENST00000520493 EBPQ15125 230 aaKnown RBP2.45□□□□□ -2.02
SQLE-204ENST00000520493 FAM19A3Q7Z5A8 133 aa2.45□□□□□ -2.02
SQLE-204ENST00000520493 DPPA2Q7Z7J5 298 aa2.45□□□□□ -2.02
SQLE-204ENST00000520493 TMBIM1Q969X1 311 aa2.45□□□□□ -2.02
SQLE-204ENST00000520493 TLCD1Q96CP7 247 aa2.45□□□□□ -2.02
SQLE-204ENST00000520493 OTUB2Q96DC9 234 aa2.45□□□□□ -2.02
SQLE-204ENST00000520493 PEBP4Q96S96 227 aa2.45□□□□□ -2.02
SQLE-204ENST00000520493 SPIN2AQ99865 258 aa2.45□□□□□ -2.02
SQLE-204ENST00000520493 SPIN2BQ9BPZ2 258 aa2.45□□□□□ -2.02
SQLE-204ENST00000520493 TIPINQ9BVW5 301 aa2.45□□□□□ -2.02
SQLE-204ENST00000520493 FAM60AQ9NP50 221 aa2.45□□□□□ -2.02
SQLE-204ENST00000520493 TMEM38BQ9NVV0 291 aa2.45□□□□□ -2.02
SQLE-204ENST00000520493 RWDD2AQ9UIY3 292 aa2.45□□□□□ -2.02
SQLE-204ENST00000520493 BTRCQ9Y297 605 aa2.45□□□□□ -2.02
SQLE-204ENST00000520493 POLR1DQ9Y2S0 133 aa2.45□□□□□ -2.02
SQLE-204ENST00000520493 COL27A1Q8IZC6 1860 aaPredicted RBP2.45□□□□□ -2.02
SQLE-204ENST00000520493 YLPM1P49750 1951 aaKnown RBP2.45□□□□□ -2.02
SQLE-204ENST00000520493 UNC13AQ9UPW8 1703 aa2.45□□□□□ -2.02
SQLE-204ENST00000520493 PCNTO95613 3336 aa2.45□□□□□ -2.02
SQLE-204ENST00000520493 MYO5BQ9ULV0 1848 aa2.45□□□□□ -2.02
SQLE-204ENST00000520493 SCN1AP35498 2009 aa2.44□□□□□ -2.02
SQLE-204ENST00000520493 IGKV2D-24A0A075B6R9 120 aa2.44□□□□□ -2.02
SQLE-204ENST00000520493 IZUMO1RA6ND01 250 aa2.44□□□□□ -2.02
SQLE-204ENST00000520493 ARGFXA6NJG6 315 aa2.44□□□□□ -2.02
SQLE-204ENST00000520493 H3BSA7 217 aa2.44□□□□□ -2.02
SQLE-204ENST00000520493 MFNGO00587 321 aa2.44□□□□□ -2.02
SQLE-204ENST00000520493 COPEO14579 308 aa2.44□□□□□ -2.02
SQLE-204ENST00000520493 ZNF324O75467 553 aaPredicted RBP2.44□□□□□ -2.02
SQLE-204ENST00000520493 LYPLA2O95372 231 aa2.44□□□□□ -2.02
SQLE-204ENST00000520493 LHBP01229 141 aa2.44□□□□□ -2.02
SQLE-204ENST00000520493 HBZP02008 142 aa2.44□□□□□ -2.02
SQLE-204ENST00000520493 CRYBA1P05813 215 aa2.44□□□□□ -2.02
SQLE-204ENST00000520493 IL3P08700 152 aa2.44□□□□□ -2.02
SQLE-204ENST00000520493 RPS17P08708 135 aaKnown RBP2.44□□□□□ -2.02
SQLE-204ENST00000520493 OR5AC1P0C628 307 aa2.44□□□□□ -2.02
SQLE-204ENST00000520493 HIST1H1EP10412 219 aaKnown RBP2.44□□□□□ -2.02
SQLE-204ENST00000520493 PTHLHP12272 177 aa2.44□□□□□ -2.02
SQLE-204ENST00000520493 DDTP30046 118 aa2.44□□□□□ -2.02
SQLE-204ENST00000520493 MPV17P39210 176 aa2.44□□□□□ -2.02
SQLE-204ENST00000520493 IDH3GP51553 393 aaPredicted RBP2.44□□□□□ -2.02
SQLE-204ENST00000520493 RAB2AP61019 212 aa2.44□□□□□ -2.02
SQLE-204ENST00000520493 PPP1R1AQ13522 171 aa2.44□□□□□ -2.02
SQLE-204ENST00000520493 MMDQ15546 238 aa2.44□□□□□ -2.02
SQLE-204ENST00000520493 HIST3H3Q16695 136 aa2.44□□□□□ -2.02
SQLE-204ENST00000520493 TMEM241Q24JQ0 296 aa2.44□□□□□ -2.02
SQLE-204ENST00000520493 CLVS2Q5SYC1 327 aa2.44□□□□□ -2.02
SQLE-204ENST00000520493 SPATA31B1PQ5VZV4 182 aa2.44□□□□□ -2.02
SQLE-204ENST00000520493 UNQ9165/PRO28630Q6UXU0 137 aa2.44□□□□□ -2.02
SQLE-204ENST00000520493 PP632Q6XCG6 107 aa2.44□□□□□ -2.02
SQLE-204ENST00000520493 MARCH3Q86UD3 253 aa2.44□□□□□ -2.02
SQLE-204ENST00000520493 NATD1Q8N6N6 113 aa2.44□□□□□ -2.02
SQLE-204ENST00000520493 CDC26Q8NHZ8 85 aa2.44□□□□□ -2.02
SQLE-204ENST00000520493 FRZBQ92765 325 aa2.44□□□□□ -2.02
SQLE-204ENST00000520493 YIPF5Q969M3 257 aa2.44□□□□□ -2.02
SQLE-204ENST00000520493 GALMQ96C23 342 aa2.44□□□□□ -2.02
SQLE-204ENST00000520493 IP6K3Q96PC2 410 aa2.44□□□□□ -2.02
SQLE-204ENST00000520493 OR7D2Q96RA2 312 aa2.44□□□□□ -2.02
SQLE-204ENST00000520493 RTBDNQ9BSG5 229 aaPredicted RBP2.44□□□□□ -2.02
SQLE-204ENST00000520493 BCL2L14Q9BZR8 327 aa2.44□□□□□ -2.02
SQLE-204ENST00000520493 EVC2Q86UK5 1308 aa2.43□□□□□ -2.02
SQLE-204ENST00000520493 NPATQ14207 1427 aa2.43□□□□□ -2.02
SQLE-204ENST00000520493 USP9XQ93008 2570 aaPredicted RBP2.43□□□□□ -2.02
SQLE-204ENST00000520493 PLXNB3Q9ULL4 1909 aa2.43□□□□□ -2.02
SQLE-204ENST00000520493 IGHV3-43A0A0B4J1X8 118 aa2.43□□□□□ -2.02
SQLE-204ENST00000520493 BTNL10A8MVZ5 291 aa2.43□□□□□ -2.02
SQLE-204ENST00000520493 F5H5P2 479 aa2.43□□□□□ -2.02
SQLE-204ENST00000520493 IL6P05231 212 aa2.43□□□□□ -2.02
SQLE-204ENST00000520493 ATP5G1P05496 136 aa2.43□□□□□ -2.02
SQLE-204ENST00000520493 CD28P10747 220 aa2.43□□□□□ -2.02
SQLE-204ENST00000520493 GABRA1P14867 456 aa2.43□□□□□ -2.02
SQLE-204ENST00000520493 MUC1P15941 1255 aaPredicted RBP2.43□□□□□ -2.02
SQLE-204ENST00000520493 OMPP47874 163 aa2.43□□□□□ -2.02
SQLE-204ENST00000520493 ERVS71-1P61550 626 aa2.43□□□□□ -2.02
SQLE-204ENST00000520493 LSM6P62312 80 aaKnown RBP2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms