RNA–Protein interactions for RNA: ENST00000520410.2

IGHV3-42-201, Transcript of immunoglobulin heavy variable 3-42 (pseudogene), humanhuman

BASIC

Gene IGHV3-42, Length 361 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-42-201ENST00000520410 FGF16O43320 207 aa12.8□□□□□ -0.36
IGHV3-42-201ENST00000520410 ORC5O43913 435 aa12.8□□□□□ -0.36
IGHV3-42-201ENST00000520410 MT-ND4P03905 459 aa12.8□□□□□ -0.36
IGHV3-42-201ENST00000520410 FAM90A15PP0C7V4 464 aa12.8□□□□□ -0.36
IGHV3-42-201ENST00000520410 FAM90A13PP0C7W8 464 aa12.8□□□□□ -0.36
IGHV3-42-201ENST00000520410 FAM90A14PP0C7W9 464 aa12.8□□□□□ -0.36
IGHV3-42-201ENST00000520410 FAM90A24PP0C7X0 464 aa12.8□□□□□ -0.36
IGHV3-42-201ENST00000520410 VHLP40337 213 aa12.8□□□□□ -0.36
IGHV3-42-201ENST00000520410 RPS11P62280 158 aaKnown RBP eCLIP12.8□□□□□ -0.36
IGHV3-42-201ENST00000520410 PAX5Q02548 391 aa12.8□□□□□ -0.36
IGHV3-42-201ENST00000520410 GABPB1Q06547 395 aaPredicted RBP12.8□□□□□ -0.36
IGHV3-42-201ENST00000520410 ZNF816Q0VGE8 651 aaPredicted RBP12.8□□□□□ -0.36
IGHV3-42-201ENST00000520410 GPR50Q13585 617 aa12.8□□□□□ -0.36
IGHV3-42-201ENST00000520410 DOC2BQ14184 412 aa12.8□□□□□ -0.36
IGHV3-42-201ENST00000520410 RBM48Q5RL73 367 aaKnown RBP12.8□□□□□ -0.36
IGHV3-42-201ENST00000520410 TGIF2LXQ8IUE1 241 aa12.8□□□□□ -0.36
IGHV3-42-201ENST00000520410 NKAIN3Q8N8D7 197 aa12.8□□□□□ -0.36
IGHV3-42-201ENST00000520410 KLHL30-AS1Q8NEE0 82 aa12.8□□□□□ -0.36
IGHV3-42-201ENST00000520410 OR2T10Q8NGZ9 312 aa12.8□□□□□ -0.36
IGHV3-42-201ENST00000520410 THRSPQ92748 146 aa12.8□□□□□ -0.36
IGHV3-42-201ENST00000520410 DERL3Q96Q80 235 aa12.8□□□□□ -0.36
IGHV3-42-201ENST00000520410 RASL11BQ9BPW5 248 aa12.8□□□□□ -0.36
IGHV3-42-201ENST00000520410 LINC00574Q9H8X3 128 aa12.8□□□□□ -0.36
IGHV3-42-201ENST00000520410 KCNIP1Q9NZI2 227 aa12.8□□□□□ -0.36
IGHV3-42-201ENST00000520410 PLXNB1O43157 2135 aa12.79□□□□□ -0.36
IGHV3-42-201ENST00000520410 TRBV5-7A0A0A0MS05 114 aa12.79□□□□□ -0.36
IGHV3-42-201ENST00000520410 C12orf77C9JDV5 145 aa12.79□□□□□ -0.36
IGHV3-42-201ENST00000520410 C15orf65H3BRN8 121 aa12.79□□□□□ -0.36
IGHV3-42-201ENST00000520410 SLC31A2O15432 143 aa12.79□□□□□ -0.36
IGHV3-42-201ENST00000520410 HBZP02008 142 aa12.79□□□□□ -0.36
IGHV3-42-201ENST00000520410 OR52M1Q8NGK5 317 aa12.79□□□□□ -0.36
IGHV3-42-201ENST00000520410 OR1L1Q8NH94 360 aa12.79□□□□□ -0.36
IGHV3-42-201ENST00000520410 MRPS24Q96EL2 167 aaKnown RBP12.79□□□□□ -0.36
IGHV3-42-201ENST00000520410 RCC1LQ96I51 464 aaKnown RBP12.79□□□□□ -0.36
IGHV3-42-201ENST00000520410 EAF1Q96JC9 268 aaPredicted RBP12.79□□□□□ -0.36
IGHV3-42-201ENST00000520410 TMED9Q9BVK6 235 aa12.79□□□□□ -0.36
IGHV3-42-201ENST00000520410 CST11Q9H112 138 aa12.79□□□□□ -0.36
IGHV3-42-201ENST00000520410 PSORS1C1Q9UIG5 152 aa12.79□□□□□ -0.36
IGHV3-42-201ENST00000520410 ANKRD65E5RJM6 399 aa12.78□□□□□ -0.36
IGHV3-42-201ENST00000520410 GPX5O75715 221 aa12.78□□□□□ -0.36
IGHV3-42-201ENST00000520410 RPL23AP62750 156 aaKnown RBP12.78□□□□□ -0.36
IGHV3-42-201ENST00000520410 DEFB121Q5J5C9 76 aa12.78□□□□□ -0.36
IGHV3-42-201ENST00000520410 TRAT1Q6PIZ9 186 aa12.78□□□□□ -0.36
IGHV3-42-201ENST00000520410 C8orf86Q6ZUL3 223 aa12.78□□□□□ -0.36
IGHV3-42-201ENST00000520410 SETD6Q8TBK2 473 aa12.78□□□□□ -0.36
IGHV3-42-201ENST00000520410 RTN4IP1Q8WWV3 396 aaPredicted RBP12.78□□□□□ -0.36
IGHV3-42-201ENST00000520410 MND1Q9BWT6 205 aa12.78□□□□□ -0.36
IGHV3-42-201ENST00000520410 CHMP1AQ9HD42 196 aaPredicted RBP12.78□□□□□ -0.36
IGHV3-42-201ENST00000520410 OR2S2Q9NQN1 319 aa12.78□□□□□ -0.36
IGHV3-42-201ENST00000520410 PTGES3LE9PB15 166 aa12.77□□□□□ -0.37
IGHV3-42-201ENST00000520410 MOSP00540 346 aa12.77□□□□□ -0.37
IGHV3-42-201ENST00000520410 RCC1P18754 421 aaPredicted RBP12.77□□□□□ -0.37
IGHV3-42-201ENST00000520410 FUT3P21217 361 aa12.77□□□□□ -0.37
IGHV3-42-201ENST00000520410 HOXD3P31249 432 aaPredicted RBP12.77□□□□□ -0.37
IGHV3-42-201ENST00000520410 MED22Q15528 200 aa12.77□□□□□ -0.37
IGHV3-42-201ENST00000520410 OGFRL1Q5TC84 451 aaPredicted RBP12.77□□□□□ -0.37
IGHV3-42-201ENST00000520410 IZUMO1Q8IYV9 350 aa12.77□□□□□ -0.37
IGHV3-42-201ENST00000520410 STPG2Q8N412 459 aa12.77□□□□□ -0.37
IGHV3-42-201ENST00000520410 TMEM104Q8NE00 496 aa12.77□□□□□ -0.37
IGHV3-42-201ENST00000520410 NEDD4LQ96PU5 975 aa12.77□□□□□ -0.37
IGHV3-42-201ENST00000520410 TAF9BQ9HBM6 251 aa12.77□□□□□ -0.37
IGHV3-42-201ENST00000520410 RCC2Q9P258 522 aaKnown RBP12.77□□□□□ -0.37
IGHV3-42-201ENST00000520410 NOTCH1P46531 2555 aa12.76□□□□□ -0.37
IGHV3-42-201ENST00000520410 AP4M1O00189 453 aa12.76□□□□□ -0.37
IGHV3-42-201ENST00000520410 TXNL1O43396 289 aa12.76□□□□□ -0.37
IGHV3-42-201ENST00000520410 RRP9O43818 475 aaKnown RBP12.76□□□□□ -0.37
IGHV3-42-201ENST00000520410 DUS4LO95620 317 aaKnown RBP12.76□□□□□ -0.37
IGHV3-42-201ENST00000520410 MYF6P23409 242 aa12.76□□□□□ -0.37
IGHV3-42-201ENST00000520410 INSL4Q14641 139 aa12.76□□□□□ -0.37
IGHV3-42-201ENST00000520410 TMEM30BQ3MIR4 351 aa12.76□□□□□ -0.37
IGHV3-42-201ENST00000520410 ACSM3Q53FZ2 586 aa12.76□□□□□ -0.37
IGHV3-42-201ENST00000520410 GLT8D1Q68CQ7 371 aa12.76□□□□□ -0.37
IGHV3-42-201ENST00000520410 C18orf65Q6ZTR6 163 aa12.76□□□□□ -0.37
IGHV3-42-201ENST00000520410 OR2W3Q7Z3T1 314 aa12.76□□□□□ -0.37
IGHV3-42-201ENST00000520410 LINC00311Q8N616 119 aa12.76□□□□□ -0.37
IGHV3-42-201ENST00000520410 NANOGP1Q8N7R0 232 aa12.76□□□□□ -0.37
IGHV3-42-201ENST00000520410 ZNF485Q8NCK3 441 aa12.76□□□□□ -0.37
IGHV3-42-201ENST00000520410 RBMXL1Q96E39 390 aaKnown RBP12.76□□□□□ -0.37
IGHV3-42-201ENST00000520410 DUX3Q96PT4 197 aa12.76□□□□□ -0.37
IGHV3-42-201ENST00000520410 GON7Q9BXV9 100 aa12.76□□□□□ -0.37
IGHV3-42-201ENST00000520410 GPR61Q9BZJ8 451 aa12.76□□□□□ -0.37
IGHV3-42-201ENST00000520410 LIN7CQ9NUP9 197 aaKnown RBP12.76□□□□□ -0.37
IGHV3-42-201ENST00000520410 SCN3BQ9NY72 215 aa12.76□□□□□ -0.37
IGHV3-42-201ENST00000520410 FAM90A10PA6NDY2 464 aa12.75□□□□□ -0.37
IGHV3-42-201ENST00000520410 FAM90A7PA6NKC0 464 aa12.75□□□□□ -0.37
IGHV3-42-201ENST00000520410 FAM90A23PA8MXZ1 464 aa12.75□□□□□ -0.37
IGHV3-42-201ENST00000520410 ZNF736B4DX44 427 aaPredicted RBP12.75□□□□□ -0.37
IGHV3-42-201ENST00000520410 PDCD6O75340 191 aa12.75□□□□□ -0.37
IGHV3-42-201ENST00000520410 IGHG2P01859 326 aa12.75□□□□□ -0.37
IGHV3-42-201ENST00000520410 VDAC1P21796 283 aa12.75□□□□□ -0.37
IGHV3-42-201ENST00000520410 GPR12P47775 334 aa12.75□□□□□ -0.37
IGHV3-42-201ENST00000520410 GNMTQ14749 295 aa12.75□□□□□ -0.37
IGHV3-42-201ENST00000520410 CXorf66Q5JRM2 361 aaPredicted RBP12.75□□□□□ -0.37
IGHV3-42-201ENST00000520410 SLC25A48Q6ZT89 311 aaKnown RBP12.75□□□□□ -0.37
IGHV3-42-201ENST00000520410 CDH26Q8IXH8 852 aa12.75□□□□□ -0.37
IGHV3-42-201ENST00000520410 WFDC9Q8NEX5 89 aa12.75□□□□□ -0.37
IGHV3-42-201ENST00000520410 OR52L2PQ8NGH6 319 aa12.75□□□□□ -0.37
IGHV3-42-201ENST00000520410 Q96M66 194 aa12.75□□□□□ -0.37
IGHV3-42-201ENST00000520410 UQCC2Q9BRT2 126 aa12.75□□□□□ -0.37
IGHV3-42-201ENST00000520410 PLCXD1Q9NUJ7 323 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms