RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 WNT6Q9Y6F9 365 aa11.64□□□□□ -0.55
PABPC1-208ENST00000519004 NPIPB7O75200 414 aa11.64□□□□□ -0.55
PABPC1-208ENST00000519004 UTS2O95399 124 aa11.64□□□□□ -0.55
PABPC1-208ENST00000519004 IGKV1D-33P01593 117 aa11.64□□□□□ -0.55
PABPC1-208ENST00000519004 IGKV1-33P01594 117 aa11.64□□□□□ -0.55
PABPC1-208ENST00000519004 SERPINA7P05543 415 aa11.64□□□□□ -0.55
PABPC1-208ENST00000519004 CISD3P0C7P0 127 aa11.64□□□□□ -0.55
PABPC1-208ENST00000519004 ACRP10323 421 aa11.64□□□□□ -0.55
PABPC1-208ENST00000519004 IL11P20809 199 aa11.64□□□□□ -0.55
PABPC1-208ENST00000519004 ARR3P36575 388 aa11.64□□□□□ -0.55
PABPC1-208ENST00000519004 RIPPLY3P57055 190 aa11.64□□□□□ -0.55
PABPC1-208ENST00000519004 ZNF121P58317 390 aaPredicted RBP11.64□□□□□ -0.55
PABPC1-208ENST00000519004 SERF2P84101 59 aa11.64□□□□□ -0.55
PABPC1-208ENST00000519004 PLPPR5Q32ZL2 321 aa11.64□□□□□ -0.55
PABPC1-208ENST00000519004 BAGE3Q86Y29 109 aa11.64□□□□□ -0.55
PABPC1-208ENST00000519004 BAGE2Q86Y30 109 aa11.64□□□□□ -0.55
PABPC1-208ENST00000519004 ZNF525Q8N782 197 aa11.64□□□□□ -0.55
PABPC1-208ENST00000519004 OR2M7Q8NG81 312 aa11.64□□□□□ -0.55
PABPC1-208ENST00000519004 ABHD3Q8WU67 409 aa11.64□□□□□ -0.55
PABPC1-208ENST00000519004 NAT6Q93015 286 aa11.64□□□□□ -0.55
PABPC1-208ENST00000519004 KCNK17Q96T54 332 aa11.64□□□□□ -0.55
PABPC1-208ENST00000519004 FBRSQ9HAH7 460 aa11.64□□□□□ -0.55
PABPC1-208ENST00000519004 UBE2J1Q9Y385 318 aaPredicted RBP11.64□□□□□ -0.55
PABPC1-208ENST00000519004 K7ERU9 68 aa11.63□□□□□ -0.55
PABPC1-208ENST00000519004 IL33O95760 270 aa11.63□□□□□ -0.55
PABPC1-208ENST00000519004 CBLN1P23435 193 aa11.63□□□□□ -0.55
PABPC1-208ENST00000519004 NPPCP23582 126 aa11.63□□□□□ -0.55
PABPC1-208ENST00000519004 Q0VG73 95 aa11.63□□□□□ -0.55
PABPC1-208ENST00000519004 ZNF468Q5VIY5 522 aaPredicted RBP11.63□□□□□ -0.55
PABPC1-208ENST00000519004 PRR27Q6MZM9 219 aa11.63□□□□□ -0.55
PABPC1-208ENST00000519004 RPP25LQ8N5L8 163 aaKnown RBP11.63□□□□□ -0.55
PABPC1-208ENST00000519004 KLHDC1Q8N7A1 406 aa11.63□□□□□ -0.55
PABPC1-208ENST00000519004 SGMS2Q8NHU3 365 aa11.63□□□□□ -0.55
PABPC1-208ENST00000519004 ZFYVE21Q9BQ24 234 aa11.63□□□□□ -0.55
PABPC1-208ENST00000519004 SLC39A9Q9NUM3 307 aa11.63□□□□□ -0.55
PABPC1-208ENST00000519004 TAAR3PQ9P1P4 343 aa11.63□□□□□ -0.55
PABPC1-208ENST00000519004 C1QTNF9BB2RNN3 333 aa11.62□□□□□ -0.55
PABPC1-208ENST00000519004 EML2O95834 649 aa11.62□□□□□ -0.55
PABPC1-208ENST00000519004 POU3F1Q03052 451 aaPredicted RBP11.62□□□□□ -0.55
PABPC1-208ENST00000519004 ARL16Q0P5N6 197 aa11.62□□□□□ -0.55
PABPC1-208ENST00000519004 TCTEX1D1Q8N7M0 179 aa11.62□□□□□ -0.55
PABPC1-208ENST00000519004 OR2M3Q8NG83 312 aa11.62□□□□□ -0.55
PABPC1-208ENST00000519004 OR4F17Q8NGA8 305 aa11.62□□□□□ -0.55
PABPC1-208ENST00000519004 LIN37Q96GY3 246 aaPredicted RBP11.62□□□□□ -0.55
PABPC1-208ENST00000519004 MEGF9Q9H1U4 602 aa11.62□□□□□ -0.55
PABPC1-208ENST00000519004 STARD5Q9NSY2 213 aa11.62□□□□□ -0.55
PABPC1-208ENST00000519004 TBL2Q9Y4P3 447 aaKnown RBP11.62□□□□□ -0.55
PABPC1-208ENST00000519004 HMGB3O15347 200 aaKnown RBP11.62□□□□□ -0.55
PABPC1-208ENST00000519004 CEACAM5P06731 702 aa11.62□□□□□ -0.55
PABPC1-208ENST00000519004 UCP1P25874 307 aa11.62□□□□□ -0.55
PABPC1-208ENST00000519004 CAPZBP47756 277 aa11.62□□□□□ -0.55
PABPC1-208ENST00000519004 ARG2P78540 354 aa11.62□□□□□ -0.55
PABPC1-208ENST00000519004 LRRC75BQ2VPJ9 315 aa11.62□□□□□ -0.55
PABPC1-208ENST00000519004 HNRNPA1L2Q32P51 320 aaKnown RBP11.62□□□□□ -0.55
PABPC1-208ENST00000519004 DOK3Q7L591 496 aa11.62□□□□□ -0.55
PABPC1-208ENST00000519004 TBC1D26Q86UD7 250 aa11.62□□□□□ -0.55
PABPC1-208ENST00000519004 FGF14Q92915 247 aa11.62□□□□□ -0.55
PABPC1-208ENST00000519004 RERGQ96A58 199 aaPredicted RBP11.62□□□□□ -0.55
PABPC1-208ENST00000519004 PINX1Q96BK5 328 aaKnown RBP11.62□□□□□ -0.55
PABPC1-208ENST00000519004 LRRC3BQ96PB8 259 aa11.62□□□□□ -0.55
PABPC1-208ENST00000519004 SF3B5Q9BWJ5 86 aaKnown RBP11.62□□□□□ -0.55
PABPC1-208ENST00000519004 MRPL18Q9H0U6 180 aaKnown RBP11.62□□□□□ -0.55
PABPC1-208ENST00000519004 NRN1Q9NPD7 142 aa11.62□□□□□ -0.55
PABPC1-208ENST00000519004 ZNF891A8MT65 544 aaPredicted RBP11.61□□□□□ -0.55
PABPC1-208ENST00000519004 ZNF253O75346 499 aa11.61□□□□□ -0.55
PABPC1-208ENST00000519004 NRASP01111 189 aa11.61□□□□□ -0.55
PABPC1-208ENST00000519004 KRASP01116 189 aa11.61□□□□□ -0.55
PABPC1-208ENST00000519004 CLPSP04118 112 aa11.61□□□□□ -0.55
PABPC1-208ENST00000519004 CTXN2P0C2S0 81 aa11.61□□□□□ -0.55
PABPC1-208ENST00000519004 C1QTNF9P0C862 333 aa11.61□□□□□ -0.55
PABPC1-208ENST00000519004 CTSEP14091 401 aa11.61□□□□□ -0.55
PABPC1-208ENST00000519004 HERV-K104P61576 105 aa11.61□□□□□ -0.55
PABPC1-208ENST00000519004 ELAVL3Q14576 367 aaKnown RBP11.61□□□□□ -0.55
PABPC1-208ENST00000519004 ASCL4Q6XD76 172 aa11.61□□□□□ -0.55
PABPC1-208ENST00000519004 PNKDQ8N490 385 aa11.61□□□□□ -0.55
PABPC1-208ENST00000519004 OR5B3Q8NH48 314 aa11.61□□□□□ -0.55
PABPC1-208ENST00000519004 NEIL1Q96FI4 390 aaPredicted RBP11.61□□□□□ -0.55
PABPC1-208ENST00000519004 LHFPL6Q9Y693 200 aa11.61□□□□□ -0.55
PABPC1-208ENST00000519004 C5orf63A6NC05 138 aa11.61□□□□□ -0.55
PABPC1-208ENST00000519004 E9PLN8 166 aa11.61□□□□□ -0.55
PABPC1-208ENST00000519004 FCGR2AP12318 317 aa11.61□□□□□ -0.55
PABPC1-208ENST00000519004 TLE3Q04726 772 aa11.61□□□□□ -0.55
PABPC1-208ENST00000519004 EIF3IQ13347 325 aaKnown RBP11.61□□□□□ -0.55
PABPC1-208ENST00000519004 LRRC10Q5BKY1 277 aa11.61□□□□□ -0.55
PABPC1-208ENST00000519004 HAPLN4Q86UW8 402 aa11.61□□□□□ -0.55
PABPC1-208ENST00000519004 MUC15Q8N387 334 aa11.61□□□□□ -0.55
PABPC1-208ENST00000519004 ZNF596Q8TC21 504 aa11.61□□□□□ -0.55
PABPC1-208ENST00000519004 ELSPBP1Q96BH3 223 aa11.61□□□□□ -0.55
PABPC1-208ENST00000519004 SGIP1Q9BQI5 828 aa11.61□□□□□ -0.55
PABPC1-208ENST00000519004 WNT10AQ9GZT5 417 aa11.61□□□□□ -0.55
PABPC1-208ENST00000519004 SHANK1Q9Y566 2161 aa11.61□□□□□ -0.55
PABPC1-208ENST00000519004 XIRP2A4UGR9 3374 aa11.61□□□□□ -0.55
PABPC1-208ENST00000519004 EDDM13A0A1B0GTR0 161 aa11.6□□□□□ -0.55
PABPC1-208ENST00000519004 ODAMA1E959 279 aa11.6□□□□□ -0.55
PABPC1-208ENST00000519004 B4DGG1 531 aa11.6□□□□□ -0.55
PABPC1-208ENST00000519004 PRRT4C9JH25 899 aa11.6□□□□□ -0.55
PABPC1-208ENST00000519004 MS4A18H0YCH9 400 aa11.6□□□□□ -0.55
PABPC1-208ENST00000519004 J3QW42 95 aa11.6□□□□□ -0.55
PABPC1-208ENST00000519004 TAX1BP3O14907 124 aa11.6□□□□□ -0.55
PABPC1-208ENST00000519004 PPYP01298 95 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms