RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 H3BSA7 217 aa1.8□□□□□ -2.12
SQLE-202ENST00000518604 J3QKU1 62 aa1.8□□□□□ -2.12
SQLE-202ENST00000518604 CTSEP14091 401 aa1.8□□□□□ -2.12
SQLE-202ENST00000518604 COILP38432 576 aaPredicted RBP1.8□□□□□ -2.12
SQLE-202ENST00000518604 AKR1C2P52895 323 aa1.8□□□□□ -2.12
SQLE-202ENST00000518604 ZBTB8OSQ8IWT0 167 aa1.8□□□□□ -2.12
SQLE-202ENST00000518604 ZNF567Q8N184 647 aa1.8□□□□□ -2.12
SQLE-202ENST00000518604 TMIGD2Q96BF3 282 aa1.8□□□□□ -2.12
SQLE-202ENST00000518604 CCDC127Q96BQ5 260 aa1.8□□□□□ -2.12
SQLE-202ENST00000518604 KLF6Q99612 283 aaPredicted RBP1.8□□□□□ -2.12
SQLE-202ENST00000518604 OR52A5Q9H2C5 316 aa1.8□□□□□ -2.12
SQLE-202ENST00000518604 MAP3K19Q56UN5 1328 aa1.8□□□□□ -2.12
SQLE-202ENST00000518604 PTPRKQ15262 1439 aa1.8□□□□□ -2.12
SQLE-202ENST00000518604 NUP153P49790 1475 aaKnown RBP1.8□□□□□ -2.12
SQLE-202ENST00000518604 IGKV1-12A0A0C4DH73 117 aa1.79□□□□□ -2.12
SQLE-202ENST00000518604 SULT1C2O00338 296 aa1.79□□□□□ -2.12
SQLE-202ENST00000518604 GPR171O14626 319 aa1.79□□□□□ -2.12
SQLE-202ENST00000518604 TOR1AO14656 332 aa1.79□□□□□ -2.12
SQLE-202ENST00000518604 TNFAIP8O95379 198 aa1.79□□□□□ -2.12
SQLE-202ENST00000518604 IGKV1D-12P01611 117 aa1.79□□□□□ -2.12
SQLE-202ENST00000518604 LIMS3P0CW19 117 aa1.79□□□□□ -2.12
SQLE-202ENST00000518604 LIMS4P0CW20 117 aa1.79□□□□□ -2.12
SQLE-202ENST00000518604 ACTR1BP42025 376 aa1.79□□□□□ -2.12
SQLE-202ENST00000518604 MAGEA6P43360 314 aa1.79□□□□□ -2.12
SQLE-202ENST00000518604 PSMD8P48556 350 aa1.79□□□□□ -2.12
SQLE-202ENST00000518604 FAM3AP98173 230 aa1.79□□□□□ -2.12
SQLE-202ENST00000518604 TSPAN31Q12999 210 aa1.79□□□□□ -2.12
SQLE-202ENST00000518604 EXOC3L4Q17RC7 722 aa1.79□□□□□ -2.12
SQLE-202ENST00000518604 RBM48Q5RL73 367 aaKnown RBP1.79□□□□□ -2.12
SQLE-202ENST00000518604 HENMT1Q5T8I9 393 aaKnown RBP1.79□□□□□ -2.12
SQLE-202ENST00000518604 HES3Q5TGS1 186 aa1.79□□□□□ -2.12
SQLE-202ENST00000518604 VN1R4Q7Z5H5 301 aa1.79□□□□□ -2.12
SQLE-202ENST00000518604 ZFAND2AQ8N6M9 145 aa1.79□□□□□ -2.12
SQLE-202ENST00000518604 DNAAF3Q8N9W5 541 aa1.79□□□□□ -2.12
SQLE-202ENST00000518604 OR5D18Q8NGL1 313 aa1.79□□□□□ -2.12
SQLE-202ENST00000518604 OR4P4Q8NGL7 312 aa1.79□□□□□ -2.12
SQLE-202ENST00000518604 POTEKPQ9BYX7 375 aa1.79□□□□□ -2.12
SQLE-202ENST00000518604 C11orf49Q9H6J7 331 aa1.79□□□□□ -2.12
SQLE-202ENST00000518604 PSORS1C2Q9UIG4 136 aa1.79□□□□□ -2.12
SQLE-202ENST00000518604 WASHC3Q9Y3C0 194 aa1.79□□□□□ -2.12
SQLE-202ENST00000518604 COL18A1P39060 1754 aa1.78□□□□□ -2.12
SQLE-202ENST00000518604 TRGV4A0A0C4DH28 118 aa1.78□□□□□ -2.12
SQLE-202ENST00000518604 B4DEV8 164 aa1.78□□□□□ -2.12
SQLE-202ENST00000518604 SYNGR1O43759 233 aa1.78□□□□□ -2.12
SQLE-202ENST00000518604 RAB36O95755 333 aa1.78□□□□□ -2.12
SQLE-202ENST00000518604 PSMA1P25786 263 aaKnown RBP1.78□□□□□ -2.12
SQLE-202ENST00000518604 GABRA3P34903 492 aa1.78□□□□□ -2.12
SQLE-202ENST00000518604 OR2B6P58173 313 aa1.78□□□□□ -2.12
SQLE-202ENST00000518604 GTF2BQ00403 316 aa1.78□□□□□ -2.12
SQLE-202ENST00000518604 TMEM176BQ3YBM2 270 aaPredicted RBP1.78□□□□□ -2.12
SQLE-202ENST00000518604 SDIM1Q6ZPB5 146 aa1.78□□□□□ -2.12
SQLE-202ENST00000518604 TCAIMQ8N3R3 496 aa1.78□□□□□ -2.12
SQLE-202ENST00000518604 OR4C16Q8NGL9 310 aa1.78□□□□□ -2.12
SQLE-202ENST00000518604 OR11L1Q8NGX0 322 aa1.78□□□□□ -2.12
SQLE-202ENST00000518604 OR5K1Q8NHB7 308 aa1.78□□□□□ -2.12
SQLE-202ENST00000518604 CCDC12Q8WUD4 166 aaPredicted RBP1.78□□□□□ -2.12
SQLE-202ENST00000518604 EBNA1BP2Q99848 306 aaKnown RBP1.78□□□□□ -2.12
SQLE-202ENST00000518604 AICDAQ9GZX7 198 aa1.78□□□□□ -2.12
SQLE-202ENST00000518604 TAS2R9Q9NYW1 312 aa1.78□□□□□ -2.12
SQLE-202ENST00000518604 TMEM216Q9P0N5 145 aa1.78□□□□□ -2.12
SQLE-202ENST00000518604 SCML1Q9UN30 329 aa1.78□□□□□ -2.12
SQLE-202ENST00000518604 FIS1Q9Y3D6 152 aa1.78□□□□□ -2.12
SQLE-202ENST00000518604 LOC102725191A0A1B0GVB3 256 aa1.77□□□□□ -2.13
SQLE-202ENST00000518604 IGSF23A1L1A6 192 aa1.77□□□□□ -2.13
SQLE-202ENST00000518604 J3QLI3 93 aa1.77□□□□□ -2.13
SQLE-202ENST00000518604 LIN7AO14910 233 aaPredicted RBP1.77□□□□□ -2.13
SQLE-202ENST00000518604 GP1BAP07359 652 aa1.77□□□□□ -2.13
SQLE-202ENST00000518604 OR4A8P0C604 315 aa1.77□□□□□ -2.13
SQLE-202ENST00000518604 GADD45AP24522 165 aa1.77□□□□□ -2.13
SQLE-202ENST00000518604 GABARAPL2P60520 117 aa1.77□□□□□ -2.13
SQLE-202ENST00000518604 MAPK14Q16539 360 aa1.77□□□□□ -2.13
SQLE-202ENST00000518604 EBLN2Q6P2I7 272 aa1.77□□□□□ -2.13
SQLE-202ENST00000518604 TTC33Q6PID6 262 aaPredicted RBP1.77□□□□□ -2.13
SQLE-202ENST00000518604 OR5C1Q8NGR4 320 aa1.77□□□□□ -2.13
SQLE-202ENST00000518604 CHST5Q9GZS9 411 aa1.77□□□□□ -2.13
SQLE-202ENST00000518604 HEY1Q9Y5J3 304 aa1.77□□□□□ -2.13
SQLE-202ENST00000518604 MYO16Q9Y6X6 1858 aa1.76□□□□□ -2.13
SQLE-202ENST00000518604 F5H5K5 113 aa1.76□□□□□ -2.13
SQLE-202ENST00000518604 LY6LH3BQJ8 138 aa1.76□□□□□ -2.13
SQLE-202ENST00000518604 K7EQS6 105 aa1.76□□□□□ -2.13
SQLE-202ENST00000518604 NQO1P15559 274 aaKnown RBP1.76□□□□□ -2.13
SQLE-202ENST00000518604 BLVRBP30043 206 aaPredicted RBP1.76□□□□□ -2.13
SQLE-202ENST00000518604 RAB8AP61006 207 aa1.76□□□□□ -2.13
SQLE-202ENST00000518604 PDK2Q15119 407 aa1.76□□□□□ -2.13
SQLE-202ENST00000518604 CENPWQ5EE01 88 aa1.76□□□□□ -2.13
SQLE-202ENST00000518604 ANGPTL6Q8NI99 470 aa1.76□□□□□ -2.13
SQLE-202ENST00000518604 DYNC2LI1Q8TCX1 351 aa1.76□□□□□ -2.13
SQLE-202ENST00000518604 TAMM41Q96BW9 452 aa1.76□□□□□ -2.13
SQLE-202ENST00000518604 CAPZA3Q96KX2 299 aa1.76□□□□□ -2.13
SQLE-202ENST00000518604 GTSF1LQ9H1H1 148 aa1.76□□□□□ -2.13
SQLE-202ENST00000518604 UBQLN4Q9NRR5 601 aa1.76□□□□□ -2.13
SQLE-202ENST00000518604 CCL26Q9Y258 94 aa1.76□□□□□ -2.13
SQLE-202ENST00000518604 YLPM1P49750 1951 aaKnown RBP1.76□□□□□ -2.13
SQLE-202ENST00000518604 CACNA1GO43497 2377 aa1.76□□□□□ -2.13
SQLE-202ENST00000518604 SHANK3Q9BYB0 1731 aa1.75□□□□□ -2.13
SQLE-202ENST00000518604 PTPRJQ12913 1337 aa1.75□□□□□ -2.13
SQLE-202ENST00000518604 ODF3BA8MYP8 253 aa1.75□□□□□ -2.13
SQLE-202ENST00000518604 M0QYV0 167 aa1.75□□□□□ -2.13
SQLE-202ENST00000518604 IGHV3-30-3P0DP02 117 aa1.75□□□□□ -2.13
SQLE-202ENST00000518604 SLC13A5Q86YT5 568 aaPredicted RBP1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms