RNA–Protein interactions for RNA: ENST00000517862.1

CPNE3-204, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 654 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-204ENST00000517862 KRTAP7-1Q8IUC3 87 aa2.21□□□□□ -2.06
CPNE3-204ENST00000517862 TCAIMQ8N3R3 496 aa2.21□□□□□ -2.06
CPNE3-204ENST00000517862 TMEM252Q8N6L7 170 aa2.21□□□□□ -2.06
CPNE3-204ENST00000517862 ZNF283Q8N7M2 679 aa2.21□□□□□ -2.06
CPNE3-204ENST00000517862 C8orf31Q8N9H6 132 aa2.21□□□□□ -2.06
CPNE3-204ENST00000517862 DRAXINQ8NBI3 349 aaPredicted RBP2.21□□□□□ -2.06
CPNE3-204ENST00000517862 OR11H1Q8NG94 326 aa2.21□□□□□ -2.06
CPNE3-204ENST00000517862 OR51L1Q8NGJ5 315 aa2.21□□□□□ -2.06
CPNE3-204ENST00000517862 LKAAEAR1Q8TD35 194 aa2.21□□□□□ -2.06
CPNE3-204ENST00000517862 MITD1Q8WV92 249 aa2.21□□□□□ -2.06
CPNE3-204ENST00000517862 DCUN1D4Q92564 292 aa2.21□□□□□ -2.06
CPNE3-204ENST00000517862 ARPC1AQ92747 370 aa2.21□□□□□ -2.06
CPNE3-204ENST00000517862 OR4C12Q96R67 309 aa2.21□□□□□ -2.06
CPNE3-204ENST00000517862 SH3GL1Q99961 368 aa2.21□□□□□ -2.06
CPNE3-204ENST00000517862 ZNF717Q9BY31 904 aaPredicted RBP2.21□□□□□ -2.06
CPNE3-204ENST00000517862 PRRG3Q9BZD7 231 aa2.21□□□□□ -2.06
CPNE3-204ENST00000517862 NAA50Q9GZZ1 169 aaKnown RBP2.21□□□□□ -2.06
CPNE3-204ENST00000517862 C20orf85Q9H1P6 137 aa2.21□□□□□ -2.06
CPNE3-204ENST00000517862 DHX35Q9H5Z1 703 aaKnown RBP2.21□□□□□ -2.06
CPNE3-204ENST00000517862 EMC3Q9P0I2 261 aa2.21□□□□□ -2.06
CPNE3-204ENST00000517862 COQ4Q9Y3A0 265 aa2.21□□□□□ -2.06
CPNE3-204ENST00000517862 PRSS21Q9Y6M0 314 aa2.21□□□□□ -2.06
CPNE3-204ENST00000517862 CDH10Q9Y6N8 788 aa2.21□□□□□ -2.06
CPNE3-204ENST00000517862 DNAH8Q96JB1 4490 aa2.21□□□□□ -2.06
CPNE3-204ENST00000517862 IGLV8-61A0A075B6I0 122 aa2.2□□□□□ -2.06
CPNE3-204ENST00000517862 IGKV1D-13A0A0B4J2D9 117 aa2.2□□□□□ -2.06
CPNE3-204ENST00000517862 A0A0G2JN53 185 aa2.2□□□□□ -2.06
CPNE3-204ENST00000517862 LOC100506127A0A0U1RQW1 187 aa2.2□□□□□ -2.06
CPNE3-204ENST00000517862 NBDYA0A0U1RRE5 68 aa2.2□□□□□ -2.06
CPNE3-204ENST00000517862 TMEM120BA0PK00 339 aa2.2□□□□□ -2.06
CPNE3-204ENST00000517862 C4orf51C9J302 202 aa2.2□□□□□ -2.06
CPNE3-204ENST00000517862 F8VZ95 297 aa2.2□□□□□ -2.06
CPNE3-204ENST00000517862 NDUFAB1O14561 156 aa2.2□□□□□ -2.06
CPNE3-204ENST00000517862 IGLV1-47P01700 117 aa2.2□□□□□ -2.06
CPNE3-204ENST00000517862 HLA-HP01893 362 aa2.2□□□□□ -2.06
CPNE3-204ENST00000517862 CLPSP04118 112 aa2.2□□□□□ -2.06
CPNE3-204ENST00000517862 UBTFL6P0CB48 400 aaPredicted RBP2.2□□□□□ -2.06
CPNE3-204ENST00000517862 SMIM10L1P0DMW3 83 aa2.2□□□□□ -2.06
CPNE3-204ENST00000517862 IGKV1-13P0DP09 117 aa2.2□□□□□ -2.06
CPNE3-204ENST00000517862 ERGP11308 486 aa2.2□□□□□ -2.06
CPNE3-204ENST00000517862 CBR1P16152 277 aa2.2□□□□□ -2.06
CPNE3-204ENST00000517862 IGFBP3P17936 291 aaPredicted RBP2.2□□□□□ -2.06
CPNE3-204ENST00000517862 TBPP20226 339 aa2.2□□□□□ -2.06
CPNE3-204ENST00000517862 PMCHP20382 165 aa2.2□□□□□ -2.06
CPNE3-204ENST00000517862 LCN1P31025 176 aa2.2□□□□□ -2.06
CPNE3-204ENST00000517862 CCR7P32248 378 aa2.2□□□□□ -2.06
CPNE3-204ENST00000517862 AQP2P41181 271 aa2.2□□□□□ -2.06
CPNE3-204ENST00000517862 ATP6AP1Q15904 470 aa2.2□□□□□ -2.06
CPNE3-204ENST00000517862 PRR4Q16378 134 aa2.2□□□□□ -2.06
CPNE3-204ENST00000517862 TRMT5Q32P41 509 aaKnown RBP2.2□□□□□ -2.06
CPNE3-204ENST00000517862 Q3ZCU0 254 aa2.2□□□□□ -2.06
CPNE3-204ENST00000517862 SPRNQ5BIV9 151 aa2.2□□□□□ -2.06
CPNE3-204ENST00000517862 PAGE2BQ5JRK9 111 aa2.2□□□□□ -2.06
CPNE3-204ENST00000517862 GFI1BQ5VTD9 330 aa2.2□□□□□ -2.06
CPNE3-204ENST00000517862 C1orf146Q5VVC0 180 aa2.2□□□□□ -2.06
CPNE3-204ENST00000517862 LCN12Q6JVE5 192 aa2.2□□□□□ -2.06
CPNE3-204ENST00000517862 TMIGD1Q6UXZ0 262 aa2.2□□□□□ -2.06
CPNE3-204ENST00000517862 ASCL4Q6XD76 172 aa2.2□□□□□ -2.06
CPNE3-204ENST00000517862 MOB1BQ7L9L4 216 aa2.2□□□□□ -2.06
CPNE3-204ENST00000517862 HSD17B13Q7Z5P4 300 aaPredicted RBP2.2□□□□□ -2.06
CPNE3-204ENST00000517862 CMC1Q7Z7K0 106 aa2.2□□□□□ -2.06
CPNE3-204ENST00000517862 ZNF440Q8IYI8 595 aa2.2□□□□□ -2.06
CPNE3-204ENST00000517862 JAGN1Q8N5M9 183 aa2.2□□□□□ -2.06
CPNE3-204ENST00000517862 DEFB125Q8N687 156 aa2.2□□□□□ -2.06
CPNE3-204ENST00000517862 TRIML2Q8N7C3 387 aa2.2□□□□□ -2.06
CPNE3-204ENST00000517862 INO80EQ8NBZ0 244 aaPredicted RBP2.2□□□□□ -2.06
CPNE3-204ENST00000517862 FBXO36Q8NEA4 188 aa2.2□□□□□ -2.06
CPNE3-204ENST00000517862 OR4K2Q8NGD2 314 aa2.2□□□□□ -2.06
CPNE3-204ENST00000517862 JOSD2Q8TAC2 188 aa2.2□□□□□ -2.06
CPNE3-204ENST00000517862 SYNPRQ8TBG9 265 aa2.2□□□□□ -2.06
CPNE3-204ENST00000517862 NT5CQ8TCD5 201 aa2.2□□□□□ -2.06
CPNE3-204ENST00000517862 C10orf82Q8WW14 230 aa2.2□□□□□ -2.06
CPNE3-204ENST00000517862 RASL10AQ92737 203 aa2.2□□□□□ -2.06
CPNE3-204ENST00000517862 FGGYQ96C11 551 aa2.2□□□□□ -2.06
CPNE3-204ENST00000517862 SMIM10Q96HG1 83 aa2.2□□□□□ -2.06
CPNE3-204ENST00000517862 RNF145Q96MT1 663 aa2.2□□□□□ -2.06
CPNE3-204ENST00000517862 FOPNLQ96NB1 174 aa2.2□□□□□ -2.06
CPNE3-204ENST00000517862 ZNF184Q99676 751 aaPredicted RBP2.2□□□□□ -2.06
CPNE3-204ENST00000517862 ECSITQ9BQ95 431 aa2.2□□□□□ -2.06
CPNE3-204ENST00000517862 HINT2Q9BX68 163 aa2.2□□□□□ -2.06
CPNE3-204ENST00000517862 PIGUQ9H490 435 aa2.2□□□□□ -2.06
CPNE3-204ENST00000517862 ISG20L2Q9H9L3 353 aaKnown RBP2.2□□□□□ -2.06
CPNE3-204ENST00000517862 CALYQ9NYX4 217 aa2.2□□□□□ -2.06
CPNE3-204ENST00000517862 SENP1Q9P0U3 644 aa2.2□□□□□ -2.06
CPNE3-204ENST00000517862 IGLV3-9A0A075B6K5 115 aa2.19□□□□□ -2.06
CPNE3-204ENST00000517862 IGHV7-81A0A0B4J1V7 117 aa2.19□□□□□ -2.06
CPNE3-204ENST00000517862 OR6C70A6NIJ9 312 aa2.19□□□□□ -2.06
CPNE3-204ENST00000517862 KRTAP16-1A8MUX0 517 aa2.19□□□□□ -2.06
CPNE3-204ENST00000517862 K7EMT4 169 aa2.19□□□□□ -2.06
CPNE3-204ENST00000517862 PLPP1O14494 284 aa2.19□□□□□ -2.06
CPNE3-204ENST00000517862 DYNC1I1O14576 645 aa2.19□□□□□ -2.06
CPNE3-204ENST00000517862 AGPAT2O15120 278 aa2.19□□□□□ -2.06
CPNE3-204ENST00000517862 ZNF780AO75290 641 aaPredicted RBP2.19□□□□□ -2.06
CPNE3-204ENST00000517862 EIF3GO75821 320 aaKnown RBP eCLIP2.19□□□□□ -2.06
CPNE3-204ENST00000517862 IGHV3-48P01763 117 aa2.19□□□□□ -2.06
CPNE3-204ENST00000517862 OR8U9P0C7N5 309 aa2.19□□□□□ -2.06
CPNE3-204ENST00000517862 OR56A5P0C7T3 313 aa2.19□□□□□ -2.06
CPNE3-204ENST00000517862 HIST1H1TP22492 207 aaPredicted RBP2.19□□□□□ -2.06
CPNE3-204ENST00000517862 FMO3P31513 532 aa2.19□□□□□ -2.06
CPNE3-204ENST00000517862 ARR3P36575 388 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms