RNA–Protein interactions for RNA: ENST00000516956.1

SCARNA16.4-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 187 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.4-201ENST00000516956 GNG10P50151 68 aa4.48□□□□□ -1.69
SCARNA16.4-201ENST00000516956 UBE2E1P51965 193 aa4.48□□□□□ -1.69
SCARNA16.4-201ENST00000516956 TMEM50BP56557 158 aa4.48□□□□□ -1.69
SCARNA16.4-201ENST00000516956 TAS2R46P59540 309 aa4.48□□□□□ -1.69
SCARNA16.4-201ENST00000516956 AP3S2P59780 193 aa4.48□□□□□ -1.69
SCARNA16.4-201ENST00000516956 TSPAN5P62079 268 aa4.48□□□□□ -1.69
SCARNA16.4-201ENST00000516956 HLA-DRB3P79483 266 aa4.48□□□□□ -1.69
SCARNA16.4-201ENST00000516956 PAX5Q02548 391 aa4.48□□□□□ -1.69
SCARNA16.4-201ENST00000516956 MADCAM1Q13477 382 aa4.48□□□□□ -1.69
SCARNA16.4-201ENST00000516956 CNPY1Q3B7I2 92 aa4.48□□□□□ -1.69
SCARNA16.4-201ENST00000516956 ZNF260Q3ZCT1 412 aa4.48□□□□□ -1.69
SCARNA16.4-201ENST00000516956 RNASE12Q5GAN4 147 aaKnown RBP4.48□□□□□ -1.69
SCARNA16.4-201ENST00000516956 PLAC9Q5JTB6 97 aa4.48□□□□□ -1.69
SCARNA16.4-201ENST00000516956 SIGIRRQ6IA17 410 aa4.48□□□□□ -1.69
SCARNA16.4-201ENST00000516956 TMEM17Q86X19 198 aa4.48□□□□□ -1.69
SCARNA16.4-201ENST00000516956 LAX1Q8IWV1 398 aa4.48□□□□□ -1.69
SCARNA16.4-201ENST00000516956 BEST4Q8NFU0 473 aa4.48□□□□□ -1.69
SCARNA16.4-201ENST00000516956 OR2AK2Q8NG84 335 aa4.48□□□□□ -1.69
SCARNA16.4-201ENST00000516956 OR52M1Q8NGK5 317 aa4.48□□□□□ -1.69
SCARNA16.4-201ENST00000516956 OR4A4PQ8NGN8 299 aa4.48□□□□□ -1.69
SCARNA16.4-201ENST00000516956 OR5H2Q8NGV7 314 aa4.48□□□□□ -1.69
SCARNA16.4-201ENST00000516956 OR10X1Q8NGY0 326 aa4.48□□□□□ -1.69
SCARNA16.4-201ENST00000516956 OR1L1Q8NH94 360 aa4.48□□□□□ -1.69
SCARNA16.4-201ENST00000516956 UBALD1Q8TB05 177 aa4.48□□□□□ -1.69
SCARNA16.4-201ENST00000516956 ZNF418Q8TF45 676 aaPredicted RBP4.48□□□□□ -1.69
SCARNA16.4-201ENST00000516956 NUDCD2Q8WVJ2 157 aa4.48□□□□□ -1.69
SCARNA16.4-201ENST00000516956 CAPSLQ8WWF8 208 aa4.48□□□□□ -1.69
SCARNA16.4-201ENST00000516956 GCDHQ92947 438 aaPredicted RBP4.48□□□□□ -1.69
SCARNA16.4-201ENST00000516956 UPRTQ96BW1 309 aa4.48□□□□□ -1.69
SCARNA16.4-201ENST00000516956 JMJD8Q96S16 334 aa4.48□□□□□ -1.69
SCARNA16.4-201ENST00000516956 HDHD3Q9BSH5 251 aaPredicted RBP4.48□□□□□ -1.69
SCARNA16.4-201ENST00000516956 TMPRSS13Q9BYE2 586 aa4.48□□□□□ -1.69
SCARNA16.4-201ENST00000516956 SLIRPQ9GZT3 109 aaKnown RBP4.48□□□□□ -1.69
SCARNA16.4-201ENST00000516956 SIRPDQ9H106 197 aa4.48□□□□□ -1.69
SCARNA16.4-201ENST00000516956 GSX1Q9H4S2 264 aaPredicted RBP4.48□□□□□ -1.69
SCARNA16.4-201ENST00000516956 Q9N2K0 584 aa4.48□□□□□ -1.69
SCARNA16.4-201ENST00000516956 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.48□□□□□ -1.69
SCARNA16.4-201ENST00000516956 ABCB10Q9NRK6 738 aa4.48□□□□□ -1.69
SCARNA16.4-201ENST00000516956 NECAP2Q9NVZ3 263 aa4.48□□□□□ -1.69
SCARNA16.4-201ENST00000516956 TMEM160Q9NX00 188 aa4.48□□□□□ -1.69
SCARNA16.4-201ENST00000516956 TAS2R8Q9NYW2 309 aa4.48□□□□□ -1.69
SCARNA16.4-201ENST00000516956 ZNF581Q9P0T4 197 aa4.48□□□□□ -1.69
SCARNA16.4-201ENST00000516956 ZNF69Q9UC07 566 aa4.48□□□□□ -1.69
SCARNA16.4-201ENST00000516956 SLC23A1Q9UHI7 598 aa4.48□□□□□ -1.69
SCARNA16.4-201ENST00000516956 ZNF221Q9UK13 617 aa4.48□□□□□ -1.69
SCARNA16.4-201ENST00000516956 MYO9AB2RTY4 2548 aa4.47□□□□□ -1.69
SCARNA16.4-201ENST00000516956 TRBV6-6A0A0A6YYG2 114 aa4.47□□□□□ -1.69
SCARNA16.4-201ENST00000516956 IGHV3-43A0A0B4J1X8 118 aa4.47□□□□□ -1.69
SCARNA16.4-201ENST00000516956 IGHV1-69DA0A0B4J2H0 117 aa4.47□□□□□ -1.69
SCARNA16.4-201ENST00000516956 FAM172BPA6NC97 362 aa4.47□□□□□ -1.69
SCARNA16.4-201ENST00000516956 MEIS3P1A6NDR6 274 aa4.47□□□□□ -1.69
SCARNA16.4-201ENST00000516956 LEUTXA8MZ59 168 aa4.47□□□□□ -1.69
SCARNA16.4-201ENST00000516956 ZNF736B4DX44 427 aaPredicted RBP4.47□□□□□ -1.69
SCARNA16.4-201ENST00000516956 INAFM1C9JVW0 142 aa4.47□□□□□ -1.69
SCARNA16.4-201ENST00000516956 GABARAPH6UMI1 98 aa4.47□□□□□ -1.69
SCARNA16.4-201ENST00000516956 NPFFO15130 113 aa4.47□□□□□ -1.69
SCARNA16.4-201ENST00000516956 NAPSAO96009 420 aa4.47□□□□□ -1.69
SCARNA16.4-201ENST00000516956 IGHV1-69P01742 117 aa4.47□□□□□ -1.69
SCARNA16.4-201ENST00000516956 MELTFP08582 738 aa4.47□□□□□ -1.69
SCARNA16.4-201ENST00000516956 FBP1P09467 338 aa4.47□□□□□ -1.69
SCARNA16.4-201ENST00000516956 CSF1P09603 554 aa4.47□□□□□ -1.69
SCARNA16.4-201ENST00000516956 IGHV3-43DP0DP04 118 aa4.47□□□□□ -1.69
SCARNA16.4-201ENST00000516956 PTBP1P26599 531 aaKnown RBP eCLIP4.47□□□□□ -1.69
SCARNA16.4-201ENST00000516956 HTR1DP28221 377 aa4.47□□□□□ -1.69
SCARNA16.4-201ENST00000516956 BRS3P32247 399 aa4.47□□□□□ -1.69
SCARNA16.4-201ENST00000516956 FAUP35544 74 aaKnown RBP4.47□□□□□ -1.69
SCARNA16.4-201ENST00000516956 RAB7AP51149 207 aa4.47□□□□□ -1.69
SCARNA16.4-201ENST00000516956 HERV-K104P61576 105 aa4.47□□□□□ -1.69
SCARNA16.4-201ENST00000516956 HTD2P86397 168 aa4.47□□□□□ -1.69
SCARNA16.4-201ENST00000516956 PAX2Q02962 417 aa4.47□□□□□ -1.69
SCARNA16.4-201ENST00000516956 CBX3Q13185 183 aa4.47□□□□□ -1.69
SCARNA16.4-201ENST00000516956 SRSF7Q16629 238 aaKnown RBP eCLIP4.47□□□□□ -1.69
SCARNA16.4-201ENST00000516956 Q3ZCU0 254 aa4.47□□□□□ -1.69
SCARNA16.4-201ENST00000516956 MIDNQ504T8 468 aa4.47□□□□□ -1.69
SCARNA16.4-201ENST00000516956 ACTBL2Q562R1 376 aa4.47□□□□□ -1.69
SCARNA16.4-201ENST00000516956 TRIQKQ629K1 86 aa4.47□□□□□ -1.69
SCARNA16.4-201ENST00000516956 OLFML2AQ68BL7 652 aa4.47□□□□□ -1.69
SCARNA16.4-201ENST00000516956 CCDC144NLQ6NUI1 221 aa4.47□□□□□ -1.69
SCARNA16.4-201ENST00000516956 IL17RELQ6ZVW7 336 aa4.47□□□□□ -1.69
SCARNA16.4-201ENST00000516956 HOGA1Q86XE5 327 aa4.47□□□□□ -1.69
SCARNA16.4-201ENST00000516956 OR52L2PQ8NGH6 319 aa4.47□□□□□ -1.69
SCARNA16.4-201ENST00000516956 OR10V1Q8NGI7 309 aa4.47□□□□□ -1.69
SCARNA16.4-201ENST00000516956 OR9G1Q8NH87 305 aa4.47□□□□□ -1.69
SCARNA16.4-201ENST00000516956 S100ZQ8WXG8 99 aa4.47□□□□□ -1.69
SCARNA16.4-201ENST00000516956 MAFIPQ8WZ33 124 aa4.47□□□□□ -1.69
SCARNA16.4-201ENST00000516956 TNFRSF14Q92956 283 aa4.47□□□□□ -1.69
SCARNA16.4-201ENST00000516956 BORCS5Q969J3 196 aa4.47□□□□□ -1.69
SCARNA16.4-201ENST00000516956 RPEQ96AT9 228 aa4.47□□□□□ -1.69
SCARNA16.4-201ENST00000516956 KIRREL1Q96J84 757 aa4.47□□□□□ -1.69
SCARNA16.4-201ENST00000516956 TBX15Q96SF7 602 aa4.47□□□□□ -1.69
SCARNA16.4-201ENST00000516956 S1PR3Q99500 378 aa4.47□□□□□ -1.69
SCARNA16.4-201ENST00000516956 MBNL3Q9NUK0 354 aaKnown RBP4.47□□□□□ -1.69
SCARNA16.4-201ENST00000516956 GFOD1Q9NXC2 390 aa4.47□□□□□ -1.69
SCARNA16.4-201ENST00000516956 PTTG2Q9NZH5 202 aa4.47□□□□□ -1.69
SCARNA16.4-201ENST00000516956 ZNF230Q9UIE0 474 aaPredicted RBP4.47□□□□□ -1.69
SCARNA16.4-201ENST00000516956 ANXA10Q9UJ72 324 aa4.47□□□□□ -1.69
SCARNA16.4-201ENST00000516956 JPT1Q9UK76 154 aa4.47□□□□□ -1.69
SCARNA16.4-201ENST00000516956 TBL2Q9Y4P3 447 aaKnown RBP4.47□□□□□ -1.69
SCARNA16.4-201ENST00000516956 FLNAP21333 2647 aaKnown RBP4.46□□□□□ -1.69
SCARNA16.4-201ENST00000516956 IGHV2-26A0A0B4J1V2 119 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms