RNA–Protein interactions for RNA: ENST00000515736.2

SFXN1-211, Transcript of sideroflexin 1, humanhuman

TSL 3

Gene SFXN1, Length 453 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-211ENST00000515736 CNTRLQ7Z7A1 2325 aa6.96□□□□□ -1.29
SFXN1-211ENST00000515736 ZNF407Q9C0G0 2248 aa6.96□□□□□ -1.29
SFXN1-211ENST00000515736 IGKV1-27A0A075B6S5 117 aa6.96□□□□□ -1.3
SFXN1-211ENST00000515736 LOC100509620A0A075B734 347 aa6.96□□□□□ -1.3
SFXN1-211ENST00000515736 FXYD6-FXYD2A0A087WZ82 144 aa6.96□□□□□ -1.3
SFXN1-211ENST00000515736 KANTRA0A1W2PQU2 76 aa6.96□□□□□ -1.3
SFXN1-211ENST00000515736 C5orf49A4QMS7 147 aa6.96□□□□□ -1.3
SFXN1-211ENST00000515736 ANKRD30BLA7E2S9 258 aa6.96□□□□□ -1.3
SFXN1-211ENST00000515736 ARPC5O15511 151 aa6.96□□□□□ -1.3
SFXN1-211ENST00000515736 PAX4O43316 350 aa6.96□□□□□ -1.3
SFXN1-211ENST00000515736 SLC25A17O43808 307 aa6.96□□□□□ -1.3
SFXN1-211ENST00000515736 MPC2O95563 127 aa6.96□□□□□ -1.3
SFXN1-211ENST00000515736 F10P00742 488 aa6.96□□□□□ -1.3
SFXN1-211ENST00000515736 CSN2P05814 226 aa6.96□□□□□ -1.3
SFXN1-211ENST00000515736 FCGR3AP08637 254 aa6.96□□□□□ -1.3
SFXN1-211ENST00000515736 CTXN2P0C2S0 81 aa6.96□□□□□ -1.3
SFXN1-211ENST00000515736 CD79AP11912 226 aa6.96□□□□□ -1.3
SFXN1-211ENST00000515736 ANOS1P23352 680 aa6.96□□□□□ -1.3
SFXN1-211ENST00000515736 GABRR1P24046 479 aa6.96□□□□□ -1.3
SFXN1-211ENST00000515736 GLP1RP43220 463 aa6.96□□□□□ -1.3
SFXN1-211ENST00000515736 FGF12P61328 243 aa6.96□□□□□ -1.3
SFXN1-211ENST00000515736 GNG3P63215 75 aa6.96□□□□□ -1.3
SFXN1-211ENST00000515736 SRPXP78539 464 aa6.96□□□□□ -1.3
SFXN1-211ENST00000515736 SNTB1Q13884 538 aaKnown RBP6.96□□□□□ -1.3
SFXN1-211ENST00000515736 GUSBP1Q15486 140 aa6.96□□□□□ -1.3
SFXN1-211ENST00000515736 ADIPOQQ15848 244 aa6.96□□□□□ -1.3
SFXN1-211ENST00000515736 AADACL3Q5VUY0 350 aa6.96□□□□□ -1.3
SFXN1-211ENST00000515736 DCAF12L2Q5VW00 463 aa6.96□□□□□ -1.3
SFXN1-211ENST00000515736 DHRS11Q6UWP2 260 aa6.96□□□□□ -1.3
SFXN1-211ENST00000515736 IGFL3Q6UXB1 125 aa6.96□□□□□ -1.3
SFXN1-211ENST00000515736 FBXW12Q6X9E4 464 aa6.96□□□□□ -1.3
SFXN1-211ENST00000515736 ACOT7LQ6ZUV0 252 aa6.96□□□□□ -1.3
SFXN1-211ENST00000515736 ZNF546Q86UE3 836 aa6.96□□□□□ -1.3
SFXN1-211ENST00000515736 SGPP2Q8IWX5 399 aa6.96□□□□□ -1.3
SFXN1-211ENST00000515736 Q8IYB0 196 aa6.96□□□□□ -1.3
SFXN1-211ENST00000515736 C17orf78Q8N4C9 275 aa6.96□□□□□ -1.3
SFXN1-211ENST00000515736 ZNF611Q8N823 705 aa6.96□□□□□ -1.3
SFXN1-211ENST00000515736 INO80EQ8NBZ0 244 aaPredicted RBP6.96□□□□□ -1.3
SFXN1-211ENST00000515736 OR56B2PQ8NGI1 322 aa6.96□□□□□ -1.3
SFXN1-211ENST00000515736 FGFBP3Q8TAT2 258 aa6.96□□□□□ -1.3
SFXN1-211ENST00000515736 PIGCQ92535 297 aa6.96□□□□□ -1.3
SFXN1-211ENST00000515736 BCL2L2Q92843 193 aaPredicted RBP6.96□□□□□ -1.3
SFXN1-211ENST00000515736 PAPOLGQ9BWT3 736 aaKnown RBP6.96□□□□□ -1.3
SFXN1-211ENST00000515736 TM2D2Q9BX73 214 aa6.96□□□□□ -1.3
SFXN1-211ENST00000515736 ARL6Q9H0F7 186 aa6.96□□□□□ -1.3
SFXN1-211ENST00000515736 FXYD6Q9H0Q3 95 aa6.96□□□□□ -1.3
SFXN1-211ENST00000515736 C5orf66Q9H5L9 145 aa6.96□□□□□ -1.3
SFXN1-211ENST00000515736 ZNF701Q9NV72 531 aaPredicted RBP6.96□□□□□ -1.3
SFXN1-211ENST00000515736 C1orf123Q9NWV4 160 aa6.96□□□□□ -1.3
SFXN1-211ENST00000515736 TNFSF18Q9UNG2 199 aa6.96□□□□□ -1.3
SFXN1-211ENST00000515736 ST3GAL6Q9Y274 331 aa6.96□□□□□ -1.3
SFXN1-211ENST00000515736 TRBV6-6A0A0A6YYG2 114 aa6.95□□□□□ -1.3
SFXN1-211ENST00000515736 KIR2DS1A0A191URI9 304 aa6.95□□□□□ -1.3
SFXN1-211ENST00000515736 RPS10-NUDT3A0A1W2PQS6 291 aa6.95□□□□□ -1.3
SFXN1-211ENST00000515736 CD300LBA8K4G0 201 aa6.95□□□□□ -1.3
SFXN1-211ENST00000515736 TRAPPC2LH3BP13 241 aa6.95□□□□□ -1.3
SFXN1-211ENST00000515736 BCL2L11O43521 198 aa6.95□□□□□ -1.3
SFXN1-211ENST00000515736 DIRAS3O95661 229 aa6.95□□□□□ -1.3
SFXN1-211ENST00000515736 IFNA2P01563 188 aa6.95□□□□□ -1.3
SFXN1-211ENST00000515736 HLA-HP01893 362 aa6.95□□□□□ -1.3
SFXN1-211ENST00000515736 CRHP06850 196 aa6.95□□□□□ -1.3
SFXN1-211ENST00000515736 OR5H8P0DN80 308 aa6.95□□□□□ -1.3
SFXN1-211ENST00000515736 RRASP10301 218 aa6.95□□□□□ -1.3
SFXN1-211ENST00000515736 AKR1C4P17516 323 aa6.95□□□□□ -1.3
SFXN1-211ENST00000515736 PSMB6P28072 239 aa6.95□□□□□ -1.3
SFXN1-211ENST00000515736 PTGER4P35408 488 aa6.95□□□□□ -1.3
SFXN1-211ENST00000515736 NUP62P37198 522 aaPredicted RBP6.95□□□□□ -1.3
SFXN1-211ENST00000515736 RBMXP38159 391 aaKnown RBP6.95□□□□□ -1.3
SFXN1-211ENST00000515736 RFC3P40938 356 aa6.95□□□□□ -1.3
SFXN1-211ENST00000515736 KIR2DS4P43632 304 aa6.95□□□□□ -1.3
SFXN1-211ENST00000515736 EIF5AP63241 154 aaKnown RBP6.95□□□□□ -1.3
SFXN1-211ENST00000515736 SORDQ00796 357 aa6.95□□□□□ -1.3
SFXN1-211ENST00000515736 IL24Q13007 206 aa6.95□□□□□ -1.3
SFXN1-211ENST00000515736 PRDX4Q13162 271 aa6.95□□□□□ -1.3
SFXN1-211ENST00000515736 RBM39Q14498 530 aaKnown RBP6.95□□□□□ -1.3
SFXN1-211ENST00000515736 KIR2DS1Q14954 304 aa6.95□□□□□ -1.3
SFXN1-211ENST00000515736 GABRA6Q16445 453 aa6.95□□□□□ -1.3
SFXN1-211ENST00000515736 ZNF660Q6AZW8 331 aaPredicted RBP6.95□□□□□ -1.3
SFXN1-211ENST00000515736 SIGIRRQ6IA17 410 aa6.95□□□□□ -1.3
SFXN1-211ENST00000515736 TFAP2EQ6VUC0 442 aa6.95□□□□□ -1.3
SFXN1-211ENST00000515736 Q6ZT83 130 aa6.95□□□□□ -1.3
SFXN1-211ENST00000515736 C6orf201Q7Z4U5 140 aa6.95□□□□□ -1.3
SFXN1-211ENST00000515736 SLC38A6Q8IZM9 456 aa6.95□□□□□ -1.3
SFXN1-211ENST00000515736 FBXL14Q8N1E6 418 aa6.95□□□□□ -1.3
SFXN1-211ENST00000515736 CCDC71LQ8N9Z2 235 aa6.95□□□□□ -1.3
SFXN1-211ENST00000515736 ST6GALNAC3Q8NDV1 305 aa6.95□□□□□ -1.3
SFXN1-211ENST00000515736 SLC30A7Q8NEW0 376 aa6.95□□□□□ -1.3
SFXN1-211ENST00000515736 OR10AD1Q8NGE0 317 aa6.95□□□□□ -1.3
SFXN1-211ENST00000515736 OR10K1Q8NGX5 313 aa6.95□□□□□ -1.3
SFXN1-211ENST00000515736 OR13G1Q8NGZ3 307 aa6.95□□□□□ -1.3
SFXN1-211ENST00000515736 WIPF2Q8TF74 440 aaPredicted RBP6.95□□□□□ -1.3
SFXN1-211ENST00000515736 PPP1R1CQ8WVI7 109 aa6.95□□□□□ -1.3
SFXN1-211ENST00000515736 GALNT14Q96FL9 552 aa6.95□□□□□ -1.3
SFXN1-211ENST00000515736 SLX1AQ9BQ83 275 aa6.95□□□□□ -1.3
SFXN1-211ENST00000515736 ST6GALNAC5Q9BVH7 336 aa6.95□□□□□ -1.3
SFXN1-211ENST00000515736 SUCNR1Q9BXA5 334 aa6.95□□□□□ -1.3
SFXN1-211ENST00000515736 CHMP1AQ9HD42 196 aaPredicted RBP6.95□□□□□ -1.3
SFXN1-211ENST00000515736 TREM2Q9NZC2 230 aa6.95□□□□□ -1.3
SFXN1-211ENST00000515736 RCC2Q9P258 522 aaKnown RBP6.95□□□□□ -1.3
SFXN1-211ENST00000515736 SPRR3Q9UBC9 169 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms