RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 MGMTP16455 207 aa10.86□□□□□ -0.67
TCOF1-215ENST00000515516 FUT3P21217 361 aa10.86□□□□□ -0.67
TCOF1-215ENST00000515516 REG1BP48304 166 aa10.86□□□□□ -0.67
TCOF1-215ENST00000515516 SLC35B1P78383 322 aa10.86□□□□□ -0.67
TCOF1-215ENST00000515516 ZNF816Q0VGE8 651 aaPredicted RBP10.86□□□□□ -0.67
TCOF1-215ENST00000515516 Q3ZCU0 254 aa10.86□□□□□ -0.67
TCOF1-215ENST00000515516 PRR18Q8N4B5 295 aa10.86□□□□□ -0.67
TCOF1-215ENST00000515516 LINC00311Q8N616 119 aa10.86□□□□□ -0.67
TCOF1-215ENST00000515516 C5orf56Q8N8D9 126 aa10.86□□□□□ -0.67
TCOF1-215ENST00000515516 C8orf31Q8N9H6 132 aa10.86□□□□□ -0.67
TCOF1-215ENST00000515516 CHPT1Q8WUD6 406 aa10.86□□□□□ -0.67
TCOF1-215ENST00000515516 FBLIM1Q8WUP2 373 aa10.86□□□□□ -0.67
TCOF1-215ENST00000515516 CST11Q9H112 138 aa10.86□□□□□ -0.67
TCOF1-215ENST00000515516 NECAP2Q9NVZ3 263 aa10.86□□□□□ -0.67
TCOF1-215ENST00000515516 SCN3BQ9NY72 215 aa10.86□□□□□ -0.67
TCOF1-215ENST00000515516 KCNIP1Q9NZI2 227 aa10.86□□□□□ -0.67
TCOF1-215ENST00000515516 RCC2Q9P258 522 aaKnown RBP10.86□□□□□ -0.67
TCOF1-215ENST00000515516 NOTCH1P46531 2555 aa10.86□□□□□ -0.67
TCOF1-215ENST00000515516 PTGES3LE9PB15 166 aa10.85□□□□□ -0.67
TCOF1-215ENST00000515516 PRB2P02812 416 aaPredicted RBP10.85□□□□□ -0.67
TCOF1-215ENST00000515516 CDK1P06493 297 aa10.85□□□□□ -0.67
TCOF1-215ENST00000515516 GABPB1Q06547 395 aaPredicted RBP10.85□□□□□ -0.67
TCOF1-215ENST00000515516 GPR50Q13585 617 aa10.85□□□□□ -0.67
TCOF1-215ENST00000515516 ACSM3Q53FZ2 586 aa10.85□□□□□ -0.67
TCOF1-215ENST00000515516 TCTEX1D4Q5JR98 221 aa10.85□□□□□ -0.67
TCOF1-215ENST00000515516 LAIR2Q6ISS4 152 aa10.85□□□□□ -0.67
TCOF1-215ENST00000515516 SLC35E3Q7Z769 313 aa10.85□□□□□ -0.67
TCOF1-215ENST00000515516 FOXRED2Q8IWF2 684 aa10.85□□□□□ -0.67
TCOF1-215ENST00000515516 WFDC9Q8NEX5 89 aa10.85□□□□□ -0.67
TCOF1-215ENST00000515516 OR51D1Q8NGF3 324 aa10.85□□□□□ -0.67
TCOF1-215ENST00000515516 OR2T10Q8NGZ9 312 aa10.85□□□□□ -0.67
TCOF1-215ENST00000515516 OR4K15Q8NH41 348 aa10.85□□□□□ -0.67
TCOF1-215ENST00000515516 TFAP2CQ92754 450 aa10.85□□□□□ -0.67
TCOF1-215ENST00000515516 DCLRE1BQ9H816 532 aa10.85□□□□□ -0.67
TCOF1-215ENST00000515516 IGHV3-72A0A0B4J1Y9 119 aa10.84□□□□□ -0.67
TCOF1-215ENST00000515516 UBE2QL1A1L167 161 aa10.84□□□□□ -0.67
TCOF1-215ENST00000515516 C12orf77C9JDV5 145 aa10.84□□□□□ -0.67
TCOF1-215ENST00000515516 H0YHG0 523 aa10.84□□□□□ -0.67
TCOF1-215ENST00000515516 PIN1P1O15428 100 aa10.84□□□□□ -0.67
TCOF1-215ENST00000515516 TXNL1O43396 289 aa10.84□□□□□ -0.67
TCOF1-215ENST00000515516 HBZP02008 142 aa10.84□□□□□ -0.67
TCOF1-215ENST00000515516 UBBP0CG47 229 aa10.84□□□□□ -0.67
TCOF1-215ENST00000515516 LOXL3P58215 753 aa10.84□□□□□ -0.67
TCOF1-215ENST00000515516 SLC35A2P78381 396 aa10.84□□□□□ -0.67
TCOF1-215ENST00000515516 RNLSQ5VYX0 342 aa10.84□□□□□ -0.67
TCOF1-215ENST00000515516 GLT8D1Q68CQ7 371 aa10.84□□□□□ -0.67
TCOF1-215ENST00000515516 ZNF329Q86UD4 541 aa10.84□□□□□ -0.67
TCOF1-215ENST00000515516 OR10V1Q8NGI7 309 aa10.84□□□□□ -0.67
TCOF1-215ENST00000515516 MRAPQ8TCY5 172 aa10.84□□□□□ -0.67
TCOF1-215ENST00000515516 FAM46BQ96A09 425 aa10.84□□□□□ -0.67
TCOF1-215ENST00000515516 PHF21AQ96BD5 680 aa10.84□□□□□ -0.67
TCOF1-215ENST00000515516 EAF1Q96JC9 268 aaPredicted RBP10.84□□□□□ -0.67
TCOF1-215ENST00000515516 NEDD4LQ96PU5 975 aa10.84□□□□□ -0.67
TCOF1-215ENST00000515516 TMED9Q9BVK6 235 aa10.84□□□□□ -0.67
TCOF1-215ENST00000515516 FKBP14Q9NWM8 211 aa10.84□□□□□ -0.67
TCOF1-215ENST00000515516 DSCAML1Q8TD84 2053 aa10.84□□□□□ -0.67
TCOF1-215ENST00000515516 ANKRD65E5RJM6 399 aa10.83□□□□□ -0.68
TCOF1-215ENST00000515516 PDCD6O75340 191 aa10.83□□□□□ -0.68
TCOF1-215ENST00000515516 MPIG6BO95866 241 aa10.83□□□□□ -0.68
TCOF1-215ENST00000515516 MOSP00540 346 aa10.83□□□□□ -0.68
TCOF1-215ENST00000515516 IGLL1P15814 213 aa10.83□□□□□ -0.68
TCOF1-215ENST00000515516 CD1BP29016 333 aa10.83□□□□□ -0.68
TCOF1-215ENST00000515516 EBI3Q14213 229 aa10.83□□□□□ -0.68
TCOF1-215ENST00000515516 SPHARQ15513 63 aa10.83□□□□□ -0.68
TCOF1-215ENST00000515516 MED22Q15528 200 aa10.83□□□□□ -0.68
TCOF1-215ENST00000515516 NKAPLQ5M9Q1 402 aa10.83□□□□□ -0.68
TCOF1-215ENST00000515516 RBM48Q5RL73 367 aaKnown RBP10.83□□□□□ -0.68
TCOF1-215ENST00000515516 C6orf141Q5SZD1 244 aa10.83□□□□□ -0.68
TCOF1-215ENST00000515516 C10orf99Q6UWK7 81 aa10.83□□□□□ -0.68
TCOF1-215ENST00000515516 SLC25A48Q6ZT89 311 aaKnown RBP10.83□□□□□ -0.68
TCOF1-215ENST00000515516 TGIF2LXQ8IUE1 241 aa10.83□□□□□ -0.68
TCOF1-215ENST00000515516 IZUMO1Q8IYV9 350 aa10.83□□□□□ -0.68
TCOF1-215ENST00000515516 COMMD1Q8N668 190 aa10.83□□□□□ -0.68
TCOF1-215ENST00000515516 TMEM104Q8NE00 496 aa10.83□□□□□ -0.68
TCOF1-215ENST00000515516 OR1L1Q8NH94 360 aa10.83□□□□□ -0.68
TCOF1-215ENST00000515516 RTN4IP1Q8WWV3 396 aaPredicted RBP10.83□□□□□ -0.68
TCOF1-215ENST00000515516 Q96M66 194 aa10.83□□□□□ -0.68
TCOF1-215ENST00000515516 RASL11BQ9BPW5 248 aa10.83□□□□□ -0.68
TCOF1-215ENST00000515516 GON7Q9BXV9 100 aa10.83□□□□□ -0.68
TCOF1-215ENST00000515516 OR2S2Q9NQN1 319 aa10.83□□□□□ -0.68
TCOF1-215ENST00000515516 NUDT19A8MXV4 375 aa10.82□□□□□ -0.68
TCOF1-215ENST00000515516 SC5DO75845 299 aa10.82□□□□□ -0.68
TCOF1-215ENST00000515516 DUS4LO95620 317 aaKnown RBP10.82□□□□□ -0.68
TCOF1-215ENST00000515516 IGHG2P01859 326 aa10.82□□□□□ -0.68
TCOF1-215ENST00000515516 RCC1P18754 421 aaPredicted RBP10.82□□□□□ -0.68
TCOF1-215ENST00000515516 VHLP40337 213 aa10.82□□□□□ -0.68
TCOF1-215ENST00000515516 HSD17B12Q53GQ0 312 aa10.82□□□□□ -0.68
TCOF1-215ENST00000515516 STEAP3Q658P3 488 aa10.82□□□□□ -0.68
TCOF1-215ENST00000515516 UNQ9370/PRO34162Q6UXP9 181 aa10.82□□□□□ -0.68
TCOF1-215ENST00000515516 CEACAM19Q7Z692 300 aa10.82□□□□□ -0.68
TCOF1-215ENST00000515516 ZNF554Q86TJ5 538 aa10.82□□□□□ -0.68
TCOF1-215ENST00000515516 GAPTQ8N292 157 aa10.82□□□□□ -0.68
TCOF1-215ENST00000515516 OR8H1Q8NGG4 311 aa10.82□□□□□ -0.68
TCOF1-215ENST00000515516 PHYHIPQ92561 330 aa10.82□□□□□ -0.68
TCOF1-215ENST00000515516 UFD1Q92890 307 aa10.82□□□□□ -0.68
TCOF1-215ENST00000515516 RCC1LQ96I51 464 aaKnown RBP10.82□□□□□ -0.68
TCOF1-215ENST00000515516 NOL4LQ96MY1 436 aaPredicted RBP10.82□□□□□ -0.68
TCOF1-215ENST00000515516 TAF9BQ9HBM6 251 aa10.82□□□□□ -0.68
TCOF1-215ENST00000515516 ZFP57Q9NU63 452 aa10.82□□□□□ -0.68
TCOF1-215ENST00000515516 LINC00527Q9UJ94 153 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms