RNA–Protein interactions for RNA: ENST00000514572.1

RFC1-216, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-216ENST00000514572 IL3RAP26951 378 aa3.19□□□□□ -1.9
RFC1-216ENST00000514572 PSMB6P28072 239 aa3.19□□□□□ -1.9
RFC1-216ENST00000514572 PRSS3P35030 304 aa3.19□□□□□ -1.9
RFC1-216ENST00000514572 UGT2B10P36537 528 aa3.19□□□□□ -1.9
RFC1-216ENST00000514572 HTR2BP41595 481 aa3.19□□□□□ -1.9
RFC1-216ENST00000514572 STX4Q12846 297 aa3.19□□□□□ -1.9
RFC1-216ENST00000514572 C5orf47Q569G3 176 aa3.19□□□□□ -1.9
RFC1-216ENST00000514572 GUSBP11Q6P575 273 aa3.19□□□□□ -1.9
RFC1-216ENST00000514572 ZFP2Q6ZN57 461 aa3.19□□□□□ -1.9
RFC1-216ENST00000514572 MDP1Q86V88 176 aa3.19□□□□□ -1.9
RFC1-216ENST00000514572 KRTAP11-1Q8IUC1 163 aa3.19□□□□□ -1.9
RFC1-216ENST00000514572 DEFB119Q8N690 84 aa3.19□□□□□ -1.9
RFC1-216ENST00000514572 SNF8Q96H20 258 aa3.19□□□□□ -1.9
RFC1-216ENST00000514572 CYYR1Q96J86 154 aa3.19□□□□□ -1.9
RFC1-216ENST00000514572 ZNF396Q96N95 335 aaPredicted RBP3.19□□□□□ -1.9
RFC1-216ENST00000514572 RILPQ96NA2 401 aa3.19□□□□□ -1.9
RFC1-216ENST00000514572 CATSPER2Q96P56 530 aa3.19□□□□□ -1.9
RFC1-216ENST00000514572 VAT1Q99536 393 aa3.19□□□□□ -1.9
RFC1-216ENST00000514572 METTL8Q9H825 291 aaKnown RBP3.19□□□□□ -1.9
RFC1-216ENST00000514572 ZNF430Q9H8G1 570 aaPredicted RBP3.19□□□□□ -1.9
RFC1-216ENST00000514572 NLE1Q9NVX2 485 aaPredicted RBP3.19□□□□□ -1.9
RFC1-216ENST00000514572 URGCP-MRPS24S4R325 110 aa3.19□□□□□ -1.9
RFC1-216ENST00000514572 MUC22E2RYF6 1773 aaPredicted RBP3.19□□□□□ -1.9
RFC1-216ENST00000514572 RP1P56715 2156 aa3.19□□□□□ -1.9
RFC1-216ENST00000514572 CELSR2Q9HCU4 2923 aa3.19□□□□□ -1.9
RFC1-216ENST00000514572 ZFHX3Q15911 3703 aa3.18□□□□□ -1.9
RFC1-216ENST00000514572 DYSFO75923 2080 aa3.18□□□□□ -1.9
RFC1-216ENST00000514572 M0QXV9 152 aa3.18□□□□□ -1.9
RFC1-216ENST00000514572 OR56A5P0C7T3 313 aa3.18□□□□□ -1.9
RFC1-216ENST00000514572 ZNF688P0C7X2 276 aa3.18□□□□□ -1.9
RFC1-216ENST00000514572 GIMD1P0DJR0 217 aa3.18□□□□□ -1.9
RFC1-216ENST00000514572 OPRK1P41145 380 aa3.18□□□□□ -1.9
RFC1-216ENST00000514572 CRATP43155 626 aa3.18□□□□□ -1.9
RFC1-216ENST00000514572 RAB38P57729 211 aa3.18□□□□□ -1.9
RFC1-216ENST00000514572 OR10A3P58181 314 aa3.18□□□□□ -1.9
RFC1-216ENST00000514572 KRTAP10-3P60369 221 aa3.18□□□□□ -1.9
RFC1-216ENST00000514572 CD164Q04900 197 aa3.18□□□□□ -1.9
RFC1-216ENST00000514572 SYCP1Q15431 976 aa3.18□□□□□ -1.9
RFC1-216ENST00000514572 TEX30Q5JUR7 227 aa3.18□□□□□ -1.9
RFC1-216ENST00000514572 IDNKQ5T6J7 187 aa3.18□□□□□ -1.9
RFC1-216ENST00000514572 THOC7Q6I9Y2 204 aaKnown RBP3.18□□□□□ -1.9
RFC1-216ENST00000514572 Q6ZSR6 202 aa3.18□□□□□ -1.9
RFC1-216ENST00000514572 BHLHA15Q7RTS1 189 aaPredicted RBP3.18□□□□□ -1.9
RFC1-216ENST00000514572 MRPL52Q86TS9 123 aaKnown RBP3.18□□□□□ -1.9
RFC1-216ENST00000514572 Q8N9L7 120 aa3.18□□□□□ -1.9
RFC1-216ENST00000514572 ZNF738Q8NE65 137 aa3.18□□□□□ -1.9
RFC1-216ENST00000514572 OR2M7Q8NG81 312 aa3.18□□□□□ -1.9
RFC1-216ENST00000514572 OR4K2Q8NGD2 314 aa3.18□□□□□ -1.9
RFC1-216ENST00000514572 OR2AE1Q8NHA4 323 aa3.18□□□□□ -1.9
RFC1-216ENST00000514572 HGDQ93099 445 aa3.18□□□□□ -1.9
RFC1-216ENST00000514572 NDFIP1Q9BT67 221 aa3.18□□□□□ -1.9
RFC1-216ENST00000514572 NUDT9Q9BW91 350 aa3.18□□□□□ -1.9
RFC1-216ENST00000514572 PARVGQ9HBI0 331 aa3.18□□□□□ -1.9
RFC1-216ENST00000514572 EXOSC4Q9NPD3 245 aaKnown RBP3.18□□□□□ -1.9
RFC1-216ENST00000514572 SIRT7Q9NRC8 400 aa3.18□□□□□ -1.9
RFC1-216ENST00000514572 ZNF223Q9UK11 482 aaPredicted RBP3.18□□□□□ -1.9
RFC1-216ENST00000514572 C15orf41Q9Y2V0 281 aa3.18□□□□□ -1.9
RFC1-216ENST00000514572 LRRC42Q9Y546 428 aa3.18□□□□□ -1.9
RFC1-216ENST00000514572 USH1CQ9Y6N9 552 aa3.18□□□□□ -1.9
RFC1-216ENST00000514572 COL5A1P20908 1838 aaPredicted RBP3.18□□□□□ -1.9
RFC1-216ENST00000514572 BSNQ9UPA5 3926 aa3.17□□□□□ -1.9
RFC1-216ENST00000514572 PCM1Q15154 2024 aa3.17□□□□□ -1.9
RFC1-216ENST00000514572 CCDC168Q8NDH2 2452 aa3.17□□□□□ -1.9
RFC1-216ENST00000514572 SPENQ96T58 3664 aaKnown RBP3.17□□□□□ -1.9
RFC1-216ENST00000514572 HIVEP3Q5T1R4 2406 aa3.17□□□□□ -1.9
RFC1-216ENST00000514572 SPG11Q96JI7 2443 aa3.17□□□□□ -1.9
RFC1-216ENST00000514572 TMEM213A2RRL7 107 aa3.17□□□□□ -1.9
RFC1-216ENST00000514572 EIF1BO60739 113 aaKnown RBP3.17□□□□□ -1.9
RFC1-216ENST00000514572 RCBTB2O95199 551 aa3.17□□□□□ -1.9
RFC1-216ENST00000514572 IGLV3-19P01714 112 aa3.17□□□□□ -1.9
RFC1-216ENST00000514572 CISD3P0C7P0 127 aa3.17□□□□□ -1.9
RFC1-216ENST00000514572 HLA-GP17693 338 aa3.17□□□□□ -1.9
RFC1-216ENST00000514572 ME2P23368 584 aa3.17□□□□□ -1.9
RFC1-216ENST00000514572 KDELR2P33947 212 aa3.17□□□□□ -1.9
RFC1-216ENST00000514572 EIF1P41567 113 aaKnown RBP3.17□□□□□ -1.9
RFC1-216ENST00000514572 ACOT2P49753 483 aa3.17□□□□□ -1.9
RFC1-216ENST00000514572 AQP5P55064 265 aa3.17□□□□□ -1.9
RFC1-216ENST00000514572 TFAMQ00059 246 aaKnown RBP3.17□□□□□ -1.9
RFC1-216ENST00000514572 ZNF684Q5T5D7 378 aa3.17□□□□□ -1.9
RFC1-216ENST00000514572 SDHAF4Q5VUM1 108 aa3.17□□□□□ -1.9
RFC1-216ENST00000514572 HBMQ6B0K9 141 aa3.17□□□□□ -1.9
RFC1-216ENST00000514572 CLEC19AQ6UXS0 136 aa3.17□□□□□ -1.9
RFC1-216ENST00000514572 BBS7Q8IWZ6 715 aa3.17□□□□□ -1.9
RFC1-216ENST00000514572 TMEM256Q8N2U0 113 aa3.17□□□□□ -1.9
RFC1-216ENST00000514572 TTLQ8NG68 377 aa3.17□□□□□ -1.9
RFC1-216ENST00000514572 OR4K17Q8NGC6 315 aa3.17□□□□□ -1.9
RFC1-216ENST00000514572 LINC01560Q8TB33 94 aa3.17□□□□□ -1.9
RFC1-216ENST00000514572 PHF10Q8WUB8 498 aaKnown RBP3.17□□□□□ -1.9
RFC1-216ENST00000514572 TNFRSF14Q92956 283 aa3.17□□□□□ -1.9
RFC1-216ENST00000514572 TMEM159Q96B96 161 aa3.17□□□□□ -1.9
RFC1-216ENST00000514572 MRPL48Q96GC5 212 aaKnown RBP3.17□□□□□ -1.9
RFC1-216ENST00000514572 C8orf76Q96K31 380 aa3.17□□□□□ -1.9
RFC1-216ENST00000514572 BIRC8Q96P09 236 aa3.17□□□□□ -1.9
RFC1-216ENST00000514572 HBEGFQ99075 208 aa3.17□□□□□ -1.9
RFC1-216ENST00000514572 CHCHD7Q9BUK0 85 aa3.17□□□□□ -1.9
RFC1-216ENST00000514572 NXF2Q9GZY0 626 aaKnown RBP3.17□□□□□ -1.9
RFC1-216ENST00000514572 IFT46Q9NQC8 304 aa3.17□□□□□ -1.9
RFC1-216ENST00000514572 FARSAQ9Y285 508 aaKnown RBP3.17□□□□□ -1.9
RFC1-216ENST00000514572 YTHDF2Q9Y5A9 579 aaKnown RBP3.17□□□□□ -1.9
RFC1-216ENST00000514572 ESPL1Q14674 2120 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms