RNA–Protein interactions for RNA: ENST00000514493.5

SSBP2-218, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene SSBP2, Length 1,790 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-218ENST00000514493 EIF2B2P49770 351 aaKnown RBP16.4■□□□□ 0.22
SSBP2-218ENST00000514493 EFNA4P52798 201 aa16.4■□□□□ 0.22
SSBP2-218ENST00000514493 EDDM3AQ14507 147 aa16.4■□□□□ 0.22
SSBP2-218ENST00000514493 TMEM128Q5BJH2 165 aa16.4■□□□□ 0.22
SSBP2-218ENST00000514493 ZNF787Q6DD87 383 aa16.4■□□□□ 0.22
SSBP2-218ENST00000514493 LYG2Q86SG7 212 aa16.4■□□□□ 0.22
SSBP2-218ENST00000514493 SPICQ8N5J4 248 aa16.4■□□□□ 0.22
SSBP2-218ENST00000514493 MOB3AQ96BX8 217 aa16.4■□□□□ 0.22
SSBP2-218ENST00000514493 C14orf79Q96F83 325 aa16.4■□□□□ 0.22
SSBP2-218ENST00000514493 TMEM246Q9BRR3 403 aa16.4■□□□□ 0.22
SSBP2-218ENST00000514493 RTBDNQ9BSG5 229 aaPredicted RBP16.4■□□□□ 0.22
SSBP2-218ENST00000514493 CHODLQ9H9P2 273 aa16.4■□□□□ 0.22
SSBP2-218ENST00000514493 C14orf166Q9Y224 244 aaKnown RBP16.4■□□□□ 0.22
SSBP2-218ENST00000514493 ARID1AO14497 2285 aa16.4■□□□□ 0.22
SSBP2-218ENST00000514493 MEIKINA0A087WXM9 373 aa16.39■□□□□ 0.21
SSBP2-218ENST00000514493 IGKV1-6A0A0C4DH72 117 aa16.39■□□□□ 0.21
SSBP2-218ENST00000514493 BET1O15155 118 aa16.39■□□□□ 0.21
SSBP2-218ENST00000514493 NDUFA2O43678 99 aa16.39■□□□□ 0.21
SSBP2-218ENST00000514493 F12P00748 615 aaPredicted RBP16.39■□□□□ 0.21
SSBP2-218ENST00000514493 ANXA3P12429 323 aa16.39■□□□□ 0.21
SSBP2-218ENST00000514493 GLIPR1P48060 266 aa16.39■□□□□ 0.21
SSBP2-218ENST00000514493 P2RX3P56373 397 aa16.39■□□□□ 0.21
SSBP2-218ENST00000514493 SEC61A1P61619 476 aaKnown RBP16.39■□□□□ 0.21
SSBP2-218ENST00000514493 KAAG1Q9UBP8 84 aa16.39■□□□□ 0.21
SSBP2-218ENST00000514493 PCDHB10Q9UN67 800 aa16.39■□□□□ 0.21
SSBP2-218ENST00000514493 C9orf170A2RU37 121 aa16.38■□□□□ 0.21
SSBP2-218ENST00000514493 NDUFS7O75251 213 aa16.38■□□□□ 0.21
SSBP2-218ENST00000514493 PPYP01298 95 aa16.38■□□□□ 0.21
SSBP2-218ENST00000514493 CTSDP07339 412 aaPredicted RBP16.38■□□□□ 0.21
SSBP2-218ENST00000514493 PI3P19957 117 aa16.38■□□□□ 0.21
SSBP2-218ENST00000514493 NFYAP23511 347 aaPredicted RBP16.38■□□□□ 0.21
SSBP2-218ENST00000514493 HERV-K104P61576 105 aa16.38■□□□□ 0.21
SSBP2-218ENST00000514493 DHODHQ02127 395 aa16.38■□□□□ 0.21
SSBP2-218ENST00000514493 HMGN3Q15651 99 aa16.38■□□□□ 0.21
SSBP2-218ENST00000514493 C5orf24Q7Z6I8 188 aa16.38■□□□□ 0.21
SSBP2-218ENST00000514493 TPRX1Q8N7U7 411 aa16.38■□□□□ 0.21
SSBP2-218ENST00000514493 ZFAND1Q8TCF1 268 aa16.38■□□□□ 0.21
SSBP2-218ENST00000514493 TOMM40LQ969M1 308 aa16.38■□□□□ 0.21
SSBP2-218ENST00000514493 TMEM230Q96A57 120 aa16.38■□□□□ 0.21
SSBP2-218ENST00000514493 DMRTB1Q96MA1 342 aa16.38■□□□□ 0.21
SSBP2-218ENST00000514493 MGAT4CQ9UBM8 478 aa16.38■□□□□ 0.21
SSBP2-218ENST00000514493 SLC23A1Q9UHI7 598 aa16.38■□□□□ 0.21
SSBP2-218ENST00000514493 TRAV39A0A0B4J263 110 aa16.38■□□□□ 0.21
SSBP2-218ENST00000514493 ODAMA1E959 279 aa16.38■□□□□ 0.21
SSBP2-218ENST00000514493 ADAM20O43506 726 aa16.38■□□□□ 0.21
SSBP2-218ENST00000514493 DIRAS3O95661 229 aa16.38■□□□□ 0.21
SSBP2-218ENST00000514493 ZNF728P0DKX0 622 aa16.38■□□□□ 0.21
SSBP2-218ENST00000514493 AADACP22760 399 aa16.38■□□□□ 0.21
SSBP2-218ENST00000514493 VAMP1P23763 118 aa16.38■□□□□ 0.21
SSBP2-218ENST00000514493 ERP29P30040 261 aaKnown RBP16.38■□□□□ 0.21
SSBP2-218ENST00000514493 UCP3P55916 312 aa16.38■□□□□ 0.21
SSBP2-218ENST00000514493 FXYD4P59646 89 aa16.38■□□□□ 0.21
SSBP2-218ENST00000514493 ZFP69Q49AA0 526 aa16.38■□□□□ 0.21
SSBP2-218ENST00000514493 C12orf45Q8N5I9 185 aaPredicted RBP16.38■□□□□ 0.21
SSBP2-218ENST00000514493 OR2AK2Q8NG84 335 aa16.38■□□□□ 0.21
SSBP2-218ENST00000514493 TIMD4Q96H15 378 aa16.38■□□□□ 0.21
SSBP2-218ENST00000514493 NCOR1P1Q9H4R4 102 aa16.38■□□□□ 0.21
SSBP2-218ENST00000514493 CENPEQ02224 2701 aa16.37■□□□□ 0.21
SSBP2-218ENST00000514493 NPIPB11E5RHQ5 1161 aa16.37■□□□□ 0.21
SSBP2-218ENST00000514493 C6orf183Q5T699 404 aa16.37■□□□□ 0.21
SSBP2-218ENST00000514493 LYPD2Q6UXB3 125 aa16.37■□□□□ 0.21
SSBP2-218ENST00000514493 KIRREL1Q96J84 757 aa16.37■□□□□ 0.21
SSBP2-218ENST00000514493 CTSZQ9UBR2 303 aa16.37■□□□□ 0.21
SSBP2-218ENST00000514493 SLC25A10Q9UBX3 287 aaPredicted RBP16.37■□□□□ 0.21
SSBP2-218ENST00000514493 TRBV6-7A0A0A0MS04 114 aa16.36■□□□□ 0.21
SSBP2-218ENST00000514493 TUSC2O75896 110 aa16.36■□□□□ 0.21
SSBP2-218ENST00000514493 EDDM3BP56851 147 aa16.36■□□□□ 0.21
SSBP2-218ENST00000514493 AVPI1Q5T686 147 aa16.36■□□□□ 0.21
SSBP2-218ENST00000514493 TRAT1Q6PIZ9 186 aa16.36■□□□□ 0.21
SSBP2-218ENST00000514493 OR10J5Q8NHC4 309 aa16.36■□□□□ 0.21
SSBP2-218ENST00000514493 MITD1Q8WV92 249 aa16.36■□□□□ 0.21
SSBP2-218ENST00000514493 RAB1CQ92928 201 aa16.36■□□□□ 0.21
SSBP2-218ENST00000514493 ZNF436Q9C0F3 470 aaPredicted RBP16.36■□□□□ 0.21
SSBP2-218ENST00000514493 TAF9BQ9HBM6 251 aa16.36■□□□□ 0.21
SSBP2-218ENST00000514493 KCNIP1Q9NZI2 227 aa16.36■□□□□ 0.21
SSBP2-218ENST00000514493 ASH1LQ9NR48 2969 aaKnown RBP16.36■□□□□ 0.21
SSBP2-218ENST00000514493 FAM172BPA6NC97 362 aa16.36■□□□□ 0.21
SSBP2-218ENST00000514493 PPIHO43447 177 aaKnown RBP16.36■□□□□ 0.21
SSBP2-218ENST00000514493 DUS4LO95620 317 aaKnown RBP16.36■□□□□ 0.21
SSBP2-218ENST00000514493 CD34P28906 385 aa16.36■□□□□ 0.21
SSBP2-218ENST00000514493 TMEM33P57088 247 aa16.36■□□□□ 0.21
SSBP2-218ENST00000514493 SLC38A6Q8IZM9 456 aa16.36■□□□□ 0.21
SSBP2-218ENST00000514493 UXS1Q8NBZ7 420 aa16.36■□□□□ 0.21
SSBP2-218ENST00000514493 OR13A1Q8NGR1 328 aa16.36■□□□□ 0.21
SSBP2-218ENST00000514493 MRGPRDQ8TDS7 321 aa16.36■□□□□ 0.21
SSBP2-218ENST00000514493 FBN2P35556 2912 aa16.35■□□□□ 0.21
SSBP2-218ENST00000514493 FCN3O75636 299 aa16.35■□□□□ 0.21
SSBP2-218ENST00000514493 TMEM155Q4W5P6 130 aa16.35■□□□□ 0.21
SSBP2-218ENST00000514493 PRR18Q8N4B5 295 aa16.35■□□□□ 0.21
SSBP2-218ENST00000514493 IL1F10Q8WWZ1 152 aa16.35■□□□□ 0.21
SSBP2-218ENST00000514493 PHB2Q99623 299 aa16.35■□□□□ 0.21
SSBP2-218ENST00000514493 TACC2O95359 2948 aa16.35■□□□□ 0.21
SSBP2-218ENST00000514493 C12orf77C9JDV5 145 aa16.34■□□□□ 0.21
SSBP2-218ENST00000514493 SFT2D2O95562 160 aa16.34■□□□□ 0.21
SSBP2-218ENST00000514493 IGHV4-39P01824 125 aa16.34■□□□□ 0.21
SSBP2-218ENST00000514493 SUPT4H1P63272 117 aaKnown RBP16.34■□□□□ 0.21
SSBP2-218ENST00000514493 CR1LQ2VPA4 569 aa16.34■□□□□ 0.21
SSBP2-218ENST00000514493 LRRC10Q5BKY1 277 aa16.34■□□□□ 0.21
SSBP2-218ENST00000514493 H1FOOQ8IZA3 346 aaPredicted RBP16.34■□□□□ 0.21
SSBP2-218ENST00000514493 FGFRL1Q8N441 504 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms