RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 OR2G2Q8NGZ5 317 aa8.35□□□□□ -1.07
DDX41-216ENST00000513562 OR10AC1Q8NH08 325 aa8.35□□□□□ -1.07
DDX41-216ENST00000513562 UBALD1Q8TB05 177 aa8.35□□□□□ -1.07
DDX41-216ENST00000513562 DNAJC9Q8WXX5 260 aa8.35□□□□□ -1.07
DDX41-216ENST00000513562 ARL11Q969Q4 196 aa8.35□□□□□ -1.07
DDX41-216ENST00000513562 DPCDQ9BVM2 203 aaPredicted RBP8.35□□□□□ -1.07
DDX41-216ENST00000513562 ANKRD60Q9BZ19 345 aa8.35□□□□□ -1.07
DDX41-216ENST00000513562 ARL8BQ9NVJ2 186 aa8.35□□□□□ -1.07
DDX41-216ENST00000513562 FBXO7Q9Y3I1 522 aa8.35□□□□□ -1.07
DDX41-216ENST00000513562 CEPT1Q9Y6K0 416 aa8.35□□□□□ -1.07
DDX41-216ENST00000513562 TMEM30CPA0ZSE6 113 aa8.34□□□□□ -1.07
DDX41-216ENST00000513562 H0Y980 276 aa8.34□□□□□ -1.07
DDX41-216ENST00000513562 NBR2O15453 112 aa8.34□□□□□ -1.07
DDX41-216ENST00000513562 RGS11O94810 467 aa8.34□□□□□ -1.07
DDX41-216ENST00000513562 IGHV3-11P01762 117 aa8.34□□□□□ -1.07
DDX41-216ENST00000513562 ZNF134P52741 427 aa8.34□□□□□ -1.07
DDX41-216ENST00000513562 ZSCAN26Q16670 478 aa8.34□□□□□ -1.07
DDX41-216ENST00000513562 C5orf64Q2M2E5 130 aa8.34□□□□□ -1.07
DDX41-216ENST00000513562 PIGYQ3MUY2 71 aa8.34□□□□□ -1.07
DDX41-216ENST00000513562 PYHIN1Q6K0P9 492 aa8.34□□□□□ -1.07
DDX41-216ENST00000513562 FAHD1Q6P587 224 aa8.34□□□□□ -1.07
DDX41-216ENST00000513562 FAM220AQ7Z4H9 259 aa8.34□□□□□ -1.07
DDX41-216ENST00000513562 ARHGAP24Q8N264 748 aa8.34□□□□□ -1.07
DDX41-216ENST00000513562 SUMF2Q8NBJ7 301 aa8.34□□□□□ -1.07
DDX41-216ENST00000513562 PXT1Q8NFP0 134 aa8.34□□□□□ -1.07
DDX41-216ENST00000513562 OR10H4Q8NGA5 316 aa8.34□□□□□ -1.07
DDX41-216ENST00000513562 OR51A4Q8NGJ6 313 aa8.34□□□□□ -1.07
DDX41-216ENST00000513562 TMEM106AQ96A25 262 aa8.34□□□□□ -1.07
DDX41-216ENST00000513562 RITA1Q96K30 269 aa8.34□□□□□ -1.07
DDX41-216ENST00000513562 RHOVQ96L33 236 aa8.34□□□□□ -1.07
DDX41-216ENST00000513562 NABP2Q9BQ15 211 aa8.34□□□□□ -1.07
DDX41-216ENST00000513562 CST11Q9H112 138 aa8.34□□□□□ -1.07
DDX41-216ENST00000513562 IFT22Q9H7X7 185 aa8.34□□□□□ -1.07
DDX41-216ENST00000513562 FRRS1LQ9P0K9 344 aa8.34□□□□□ -1.07
DDX41-216ENST00000513562 ZNF581Q9P0T4 197 aa8.34□□□□□ -1.07
DDX41-216ENST00000513562 WARS2Q9UGM6 360 aaKnown RBP8.34□□□□□ -1.07
DDX41-216ENST00000513562 GNG8Q9UK08 70 aa8.34□□□□□ -1.07
DDX41-216ENST00000513562 ERGIC3Q9Y282 383 aa8.34□□□□□ -1.07
DDX41-216ENST00000513562 KIAA2026Q5HYC2 2103 aa8.33□□□□□ -1.08
DDX41-216ENST00000513562 SHISA3A0PJX4 238 aa8.33□□□□□ -1.08
DDX41-216ENST00000513562 LANCL1O43813 399 aa8.33□□□□□ -1.08
DDX41-216ENST00000513562 ORC5O43913 435 aa8.33□□□□□ -1.08
DDX41-216ENST00000513562 NDUFA3O95167 84 aa8.33□□□□□ -1.08
DDX41-216ENST00000513562 NANOS3P60323 173 aaKnown RBP8.33□□□□□ -1.08
DDX41-216ENST00000513562 TP53I3Q53FA7 332 aa8.33□□□□□ -1.08
DDX41-216ENST00000513562 CT45A1Q5HYN5 189 aa8.33□□□□□ -1.08
DDX41-216ENST00000513562 ZNF691Q5VV52 312 aa8.33□□□□□ -1.08
DDX41-216ENST00000513562 C12orf73Q69YU5 71 aa8.33□□□□□ -1.08
DDX41-216ENST00000513562 LIN54Q6MZP7 749 aa8.33□□□□□ -1.08
DDX41-216ENST00000513562 IL34Q6ZMJ4 242 aa8.33□□□□□ -1.08
DDX41-216ENST00000513562 NPBQ8NG41 125 aa8.33□□□□□ -1.08
DDX41-216ENST00000513562 OR13C3Q8NGS6 347 aa8.33□□□□□ -1.08
DDX41-216ENST00000513562 CT45A3Q8NHU0 189 aa8.33□□□□□ -1.08
DDX41-216ENST00000513562 CANT1Q8WVQ1 401 aa8.33□□□□□ -1.08
DDX41-216ENST00000513562 IL4I1Q96RQ9 567 aa8.33□□□□□ -1.08
DDX41-216ENST00000513562 ZNF251Q9BRH9 671 aa8.33□□□□□ -1.08
DDX41-216ENST00000513562 SULT1B1O43704 296 aa8.32□□□□□ -1.08
DDX41-216ENST00000513562 BRI3O95415 125 aa8.32□□□□□ -1.08
DDX41-216ENST00000513562 ZP3P21754 424 aa8.32□□□□□ -1.08
DDX41-216ENST00000513562 EPHA2P29317 976 aa8.32□□□□□ -1.08
DDX41-216ENST00000513562 DAPP51397 102 aa8.32□□□□□ -1.08
DDX41-216ENST00000513562 CCR9P51686 369 aa8.32□□□□□ -1.08
DDX41-216ENST00000513562 ZNF85Q03923 595 aa8.32□□□□□ -1.08
DDX41-216ENST00000513562 LRRC36Q1X8D7 754 aa8.32□□□□□ -1.08
DDX41-216ENST00000513562 TMEM30BQ3MIR4 351 aa8.32□□□□□ -1.08
DDX41-216ENST00000513562 STEAP3Q658P3 488 aa8.32□□□□□ -1.08
DDX41-216ENST00000513562 ZNF660Q6AZW8 331 aaPredicted RBP8.32□□□□□ -1.08
DDX41-216ENST00000513562 LCN12Q6JVE5 192 aa8.32□□□□□ -1.08
DDX41-216ENST00000513562 FDX2Q6P4F2 183 aa8.32□□□□□ -1.08
DDX41-216ENST00000513562 CD200R1LQ6Q8B3 271 aa8.32□□□□□ -1.08
DDX41-216ENST00000513562 RPP25LQ8N5L8 163 aaKnown RBP8.32□□□□□ -1.08
DDX41-216ENST00000513562 OR9G4Q8NGQ1 327 aa8.32□□□□□ -1.08
DDX41-216ENST00000513562 GATAD1Q8WUU5 269 aa8.32□□□□□ -1.08
DDX41-216ENST00000513562 ASB9Q96DX5 294 aa8.32□□□□□ -1.08
DDX41-216ENST00000513562 ST6GALNAC5Q9BVH7 336 aa8.32□□□□□ -1.08
DDX41-216ENST00000513562 GNG12Q9UBI6 72 aa8.32□□□□□ -1.08
DDX41-216ENST00000513562 A3GALT2U3KPV4 340 aa8.32□□□□□ -1.08
DDX41-216ENST00000513562 ZAR1LA6NP61 321 aa8.31□□□□□ -1.08
DDX41-216ENST00000513562 GABRPO00591 440 aa8.31□□□□□ -1.08
DDX41-216ENST00000513562 DYNC1I1O14576 645 aa8.31□□□□□ -1.08
DDX41-216ENST00000513562 SNX3O60493 162 aa8.31□□□□□ -1.08
DDX41-216ENST00000513562 OR7C1O76099 320 aaPredicted RBP8.31□□□□□ -1.08
DDX41-216ENST00000513562 CSTBP04080 98 aaKnown RBP8.31□□□□□ -1.08
DDX41-216ENST00000513562 EGR2P11161 476 aaPredicted RBP8.31□□□□□ -1.08
DDX41-216ENST00000513562 HOXB6P17509 224 aaKnown RBP8.31□□□□□ -1.08
DDX41-216ENST00000513562 TPPP2P59282 170 aa8.31□□□□□ -1.08
DDX41-216ENST00000513562 CX3CL1P78423 397 aa8.31□□□□□ -1.08
DDX41-216ENST00000513562 KLF5Q13887 457 aaPredicted RBP8.31□□□□□ -1.08
DDX41-216ENST00000513562 NHLRC3Q5JS37 347 aa8.31□□□□□ -1.08
DDX41-216ENST00000513562 ZNF497Q6ZNH5 498 aa8.31□□□□□ -1.08
DDX41-216ENST00000513562 Q8N402 240 aa8.31□□□□□ -1.08
DDX41-216ENST00000513562 OR10V1Q8NGI7 309 aa8.31□□□□□ -1.08
DDX41-216ENST00000513562 OR10K1Q8NGX5 313 aa8.31□□□□□ -1.08
DDX41-216ENST00000513562 CCDC107Q8WV48 283 aa8.31□□□□□ -1.08
DDX41-216ENST00000513562 TNFAIP8L1Q8WVP5 186 aa8.31□□□□□ -1.08
DDX41-216ENST00000513562 CPNE2Q96FN4 548 aaPredicted RBP8.31□□□□□ -1.08
DDX41-216ENST00000513562 MS4A10Q96PG2 267 aa8.31□□□□□ -1.08
DDX41-216ENST00000513562 MRPL20Q9BYC9 149 aaKnown RBP8.31□□□□□ -1.08
DDX41-216ENST00000513562 SLA2Q9H6Q3 261 aa8.31□□□□□ -1.08
DDX41-216ENST00000513562 PLEKHA3Q9HB20 300 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms