RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 OR10G4Q8NGN3 311 aa7.81□□□□□ -1.16
VCAN-208ENST00000512590 OR10G9Q8NGN4 311 aa7.81□□□□□ -1.16
VCAN-208ENST00000512590 OR10G7Q8NGN6 311 aa7.81□□□□□ -1.16
VCAN-208ENST00000512590 OR13F1Q8NGS4 319 aa7.81□□□□□ -1.16
VCAN-208ENST00000512590 WNT2BQ93097 391 aa7.81□□□□□ -1.16
VCAN-208ENST00000512590 C2orf50Q96LR7 162 aa7.81□□□□□ -1.16
VCAN-208ENST00000512590 SF3B5Q9BWJ5 86 aaKnown RBP7.81□□□□□ -1.16
VCAN-208ENST00000512590 AUNIPQ9H7T9 357 aa7.81□□□□□ -1.16
VCAN-208ENST00000512590 SEMA5BQ9P283 1151 aa7.81□□□□□ -1.16
VCAN-208ENST00000512590 LOC107984156A0A0G2JMH3 177 aa7.81□□□□□ -1.16
VCAN-208ENST00000512590 SYNGR3O43761 229 aa7.81□□□□□ -1.16
VCAN-208ENST00000512590 FAM157CP0CG43 387 aa7.81□□□□□ -1.16
VCAN-208ENST00000512590 CLDN20P56880 219 aa7.81□□□□□ -1.16
VCAN-208ENST00000512590 HCP5Q6MZN7 132 aa7.81□□□□□ -1.16
VCAN-208ENST00000512590 ARL17AQ8IVW1 177 aa7.81□□□□□ -1.16
VCAN-208ENST00000512590 TMEM256Q8N2U0 113 aa7.81□□□□□ -1.16
VCAN-208ENST00000512590 ABHD17AQ96GS6 310 aa7.81□□□□□ -1.16
VCAN-208ENST00000512590 SLC39A13Q96H72 371 aa7.81□□□□□ -1.16
VCAN-208ENST00000512590 BEX4Q9NWD9 120 aaPredicted RBP7.81□□□□□ -1.16
VCAN-208ENST00000512590 MROH1Q8NDA8 1641 aa7.81□□□□□ -1.16
VCAN-208ENST00000512590 FMODQ06828 376 aa7.8□□□□□ -1.16
VCAN-208ENST00000512590 FXYD3Q14802 87 aa7.8□□□□□ -1.16
VCAN-208ENST00000512590 MMD2Q8IY49 270 aa7.8□□□□□ -1.16
VCAN-208ENST00000512590 TMEM167AQ8TBQ9 72 aa7.8□□□□□ -1.16
VCAN-208ENST00000512590 TP53RKQ96S44 253 aa7.8□□□□□ -1.16
VCAN-208ENST00000512590 ZNF107Q9UII5 783 aaPredicted RBP7.8□□□□□ -1.16
VCAN-208ENST00000512590 GP1BAP07359 652 aa7.8□□□□□ -1.16
VCAN-208ENST00000512590 HIST3H3Q16695 136 aa7.8□□□□□ -1.16
VCAN-208ENST00000512590 DNM1P46Q6ZS02 220 aa7.8□□□□□ -1.16
VCAN-208ENST00000512590 SIAH3Q8IW03 269 aa7.8□□□□□ -1.16
VCAN-208ENST00000512590 ABHD12Q8N2K0 398 aa7.8□□□□□ -1.16
VCAN-208ENST00000512590 WFDC5Q8TCV5 224 aa7.8□□□□□ -1.16
VCAN-208ENST00000512590 SSMEM1Q8WWF3 244 aa7.8□□□□□ -1.16
VCAN-208ENST00000512590 RMI2Q96E14 147 aa7.8□□□□□ -1.16
VCAN-208ENST00000512590 SOSTQ9BQB4 213 aa7.8□□□□□ -1.16
VCAN-208ENST00000512590 C3orf85A0A1B0GTC6 90 aa7.8□□□□□ -1.16
VCAN-208ENST00000512590 ZNF737O75373 536 aa7.8□□□□□ -1.16
VCAN-208ENST00000512590 TCL1AP56279 114 aa7.8□□□□□ -1.16
VCAN-208ENST00000512590 ING1Q9UK53 422 aaPredicted RBP7.8□□□□□ -1.16
VCAN-208ENST00000512590 MROH2AA6NES4 1674 aa7.8□□□□□ -1.16
VCAN-208ENST00000512590 EIF3GO75821 320 aaKnown RBP eCLIP7.8□□□□□ -1.16
VCAN-208ENST00000512590 SIX6O95475 246 aa7.8□□□□□ -1.16
VCAN-208ENST00000512590 GNLYP22749 145 aa7.8□□□□□ -1.16
VCAN-208ENST00000512590 SELENOPP49908 381 aa7.8□□□□□ -1.16
VCAN-208ENST00000512590 SNRPNP63162 240 aaKnown RBP7.8□□□□□ -1.16
VCAN-208ENST00000512590 B4GALNT1Q00973 533 aa7.8□□□□□ -1.16
VCAN-208ENST00000512590 ZNF117Q03924 483 aa7.8□□□□□ -1.16
VCAN-208ENST00000512590 OR5H6Q8NGV6 325 aa7.8□□□□□ -1.16
VCAN-208ENST00000512590 TMEM74BQ9NUR3 256 aa7.8□□□□□ -1.16
VCAN-208ENST00000512590 IGHV3-66A0A0C4DH42 116 aa7.8□□□□□ -1.16
VCAN-208ENST00000512590 RER1O15258 196 aa7.8□□□□□ -1.16
VCAN-208ENST00000512590 SAA1P0DJI8 122 aaPredicted RBP7.8□□□□□ -1.16
VCAN-208ENST00000512590 TCTAP57738 103 aa7.8□□□□□ -1.16
VCAN-208ENST00000512590 CKS1BP61024 79 aa7.8□□□□□ -1.16
VCAN-208ENST00000512590 TGIF1Q15583 401 aa7.8□□□□□ -1.16
VCAN-208ENST00000512590 COX20Q5RI15 118 aa7.8□□□□□ -1.16
VCAN-208ENST00000512590 Q6ZSR9 355 aa7.8□□□□□ -1.16
VCAN-208ENST00000512590 TCTEX1D1Q8N7M0 179 aa7.8□□□□□ -1.16
VCAN-208ENST00000512590 OR10AC1Q8NH08 325 aa7.8□□□□□ -1.16
VCAN-208ENST00000512590 MARC2Q969Z3 335 aa7.8□□□□□ -1.16
VCAN-208ENST00000512590 ARHGAP5-AS1Q96IT6 56 aa7.8□□□□□ -1.16
VCAN-208ENST00000512590 WNT5BQ9H1J7 359 aa7.8□□□□□ -1.16
VCAN-208ENST00000512590 TNFSF18Q9UNG2 199 aa7.8□□□□□ -1.16
VCAN-208ENST00000512590 TRAV8-6A0A0B4J262 113 aa7.79□□□□□ -1.16
VCAN-208ENST00000512590 TEX48A0A1B0GUV7 120 aa7.79□□□□□ -1.16
VCAN-208ENST00000512590 IGHV3-11P01762 117 aa7.79□□□□□ -1.16
VCAN-208ENST00000512590 RPS27P42677 84 aaKnown RBP7.79□□□□□ -1.16
VCAN-208ENST00000512590 CD81P60033 236 aa7.79□□□□□ -1.16
VCAN-208ENST00000512590 RNF165Q6ZSG1 346 aa7.79□□□□□ -1.16
VCAN-208ENST00000512590 GCSAMQ8N6F7 178 aa7.79□□□□□ -1.16
VCAN-208ENST00000512590 NPAP1Q9NZP6 1156 aa7.79□□□□□ -1.16
VCAN-208ENST00000512590 TRAV8-7A0A075B6U6 113 aa7.79□□□□□ -1.16
VCAN-208ENST00000512590 IGHV3-23P01764 117 aa7.79□□□□□ -1.16
VCAN-208ENST00000512590 PFN3P60673 137 aa7.79□□□□□ -1.16
VCAN-208ENST00000512590 EMX1Q04741 257 aaPredicted RBP7.79□□□□□ -1.16
VCAN-208ENST00000512590 ASAH1Q13510 395 aa7.79□□□□□ -1.16
VCAN-208ENST00000512590 DMRTA1Q5VZB9 504 aa7.79□□□□□ -1.16
VCAN-208ENST00000512590 OR1K1Q8NGR3 316 aa7.79□□□□□ -1.16
VCAN-208ENST00000512590 RNF166Q96A37 237 aaPredicted RBP7.79□□□□□ -1.16
VCAN-208ENST00000512590 ZNF703Q9H7S9 590 aaPredicted RBP7.79□□□□□ -1.16
VCAN-208ENST00000512590 BAZ2BQ9UIF8 2168 aaKnown RBP7.79□□□□□ -1.16
VCAN-208ENST00000512590 TBL2Q9Y4P3 447 aaKnown RBP7.79□□□□□ -1.16
VCAN-208ENST00000512590 CAMTA1Q9Y6Y1 1673 aa7.79□□□□□ -1.16
VCAN-208ENST00000512590 IGKV3D-20A0A0C4DH25 116 aa7.79□□□□□ -1.16
VCAN-208ENST00000512590 ARRDC5A6NEK1 342 aa7.79□□□□□ -1.16
VCAN-208ENST00000512590 M0QZK8 103 aa7.79□□□□□ -1.16
VCAN-208ENST00000512590 NME4O00746 187 aa7.79□□□□□ -1.16
VCAN-208ENST00000512590 LEPP41159 167 aa7.79□□□□□ -1.16
VCAN-208ENST00000512590 SNAI3Q3KNW1 292 aa7.79□□□□□ -1.16
VCAN-208ENST00000512590 PRSS42Q7Z5A4 293 aa7.79□□□□□ -1.16
VCAN-208ENST00000512590 DTX1Q86Y01 620 aa7.79□□□□□ -1.16
VCAN-208ENST00000512590 OR5AN1Q8NGI8 311 aa7.79□□□□□ -1.16
VCAN-208ENST00000512590 FAM210AQ96ND0 272 aa7.79□□□□□ -1.16
VCAN-208ENST00000512590 RASL10BQ96S79 203 aa7.79□□□□□ -1.16
VCAN-208ENST00000512590 CD74P04233 296 aa7.79□□□□□ -1.16
VCAN-208ENST00000512590 ZNF818PQ6ZRF7 136 aa7.79□□□□□ -1.16
VCAN-208ENST00000512590 SMRP1Q8NCR6 262 aa7.79□□□□□ -1.16
VCAN-208ENST00000512590 OR8B12Q8NGG6 310 aa7.79□□□□□ -1.16
VCAN-208ENST00000512590 OR52I1Q8NGK6 324 aa7.79□□□□□ -1.16
VCAN-208ENST00000512590 PRSS27Q9BQR3 290 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms