RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 CCL13Q99616 98 aa5.07□□□□□ -1.6
USP38-203ENST00000511739 PRDM7Q9NQW5 492 aa5.07□□□□□ -1.6
USP38-203ENST00000511739 LOC102724200A0A096LPH7 203 aaPredicted RBP5.07□□□□□ -1.6
USP38-203ENST00000511739 A0A0B4J2E0 115 aa5.07□□□□□ -1.6
USP38-203ENST00000511739 A0A1B0GX12 115 aa5.07□□□□□ -1.6
USP38-203ENST00000511739 LEUTXA8MZ59 168 aa5.07□□□□□ -1.6
USP38-203ENST00000511739 AHRRA9YTQ3 701 aa5.07□□□□□ -1.6
USP38-203ENST00000511739 J3QR06 171 aa5.07□□□□□ -1.6
USP38-203ENST00000511739 CST2P09228 141 aa5.07□□□□□ -1.6
USP38-203ENST00000511739 NUBP1P53384 320 aa5.07□□□□□ -1.6
USP38-203ENST00000511739 METAP1P53582 386 aa5.07□□□□□ -1.6
USP38-203ENST00000511739 ATP5G2Q06055 141 aa5.07□□□□□ -1.6
USP38-203ENST00000511739 TWIST1Q15672 202 aa5.07□□□□□ -1.6
USP38-203ENST00000511739 SSX1Q16384 188 aa5.07□□□□□ -1.6
USP38-203ENST00000511739 MIDNQ504T8 468 aa5.07□□□□□ -1.6
USP38-203ENST00000511739 SIGIRRQ6IA17 410 aa5.07□□□□□ -1.6
USP38-203ENST00000511739 CLEC9AQ6UXN8 241 aa5.07□□□□□ -1.6
USP38-203ENST00000511739 MDP1Q86V88 176 aa5.07□□□□□ -1.6
USP38-203ENST00000511739 OR8A1Q8NGG7 326 aa5.07□□□□□ -1.6
USP38-203ENST00000511739 COPS9Q8WXC6 57 aa5.07□□□□□ -1.6
USP38-203ENST00000511739 C10orf90Q96M02 699 aa5.07□□□□□ -1.6
USP38-203ENST00000511739 TTTY12Q9BZ98 90 aa5.07□□□□□ -1.6
USP38-203ENST00000511739 SLC25A37Q9NYZ2 338 aa5.07□□□□□ -1.6
USP38-203ENST00000511739 METTL1Q9UBP6 276 aaKnown RBP5.07□□□□□ -1.6
USP38-203ENST00000511739 RAXQ9Y2V3 346 aa5.07□□□□□ -1.6
USP38-203ENST00000511739 IGHV3-72A0A0B4J1Y9 119 aa5.06□□□□□ -1.6
USP38-203ENST00000511739 H7C2G1 150 aa5.06□□□□□ -1.6
USP38-203ENST00000511739 NUDT3O95989 172 aa5.06□□□□□ -1.6
USP38-203ENST00000511739 FAM157CP0CG43 387 aa5.06□□□□□ -1.6
USP38-203ENST00000511739 CCL3P10147 92 aa5.06□□□□□ -1.6
USP38-203ENST00000511739 GABRB1P18505 474 aa5.06□□□□□ -1.6
USP38-203ENST00000511739 FABP5Q01469 135 aa5.06□□□□□ -1.6
USP38-203ENST00000511739 BAK1Q16611 211 aa5.06□□□□□ -1.6
USP38-203ENST00000511739 OR4A47Q6IF82 309 aa5.06□□□□□ -1.6
USP38-203ENST00000511739 WDR89Q96FK6 387 aaPredicted RBP5.06□□□□□ -1.6
USP38-203ENST00000511739 MS4A10Q96PG2 267 aa5.06□□□□□ -1.6
USP38-203ENST00000511739 TSPAN32Q96QS1 320 aa5.06□□□□□ -1.6
USP38-203ENST00000511739 LPAR5Q9H1C0 372 aa5.06□□□□□ -1.6
USP38-203ENST00000511739 SLC52A3Q9NQ40 469 aa5.06□□□□□ -1.6
USP38-203ENST00000511739 TRAV1-2A0A0B4J238 106 aa5.06□□□□□ -1.6
USP38-203ENST00000511739 A0A1W2PPE3 182 aa5.06□□□□□ -1.6
USP38-203ENST00000511739 OR4C46A6NHA9 309 aa5.06□□□□□ -1.6
USP38-203ENST00000511739 CLDN14O95500 239 aa5.06□□□□□ -1.6
USP38-203ENST00000511739 THY1P04216 161 aa5.06□□□□□ -1.6
USP38-203ENST00000511739 OR5AC1P0C628 307 aa5.06□□□□□ -1.6
USP38-203ENST00000511739 CTSSP25774 331 aa5.06□□□□□ -1.6
USP38-203ENST00000511739 P2RY6Q15077 328 aa5.06□□□□□ -1.6
USP38-203ENST00000511739 RSPO4Q2I0M5 234 aaPredicted RBP5.06□□□□□ -1.6
USP38-203ENST00000511739 KHDC3LQ587J8 217 aa5.06□□□□□ -1.6
USP38-203ENST00000511739 ZNF343Q6P1L6 599 aa5.06□□□□□ -1.6
USP38-203ENST00000511739 OR2C3Q8N628 320 aa5.06□□□□□ -1.6
USP38-203ENST00000511739 ZDHHC22Q8N966 263 aa5.06□□□□□ -1.6
USP38-203ENST00000511739 ZG16BQ96DA0 208 aa5.06□□□□□ -1.6
USP38-203ENST00000511739 ZNF768Q9H5H4 540 aaKnown RBP5.06□□□□□ -1.6
USP38-203ENST00000511739 KLK11Q9UBX7 282 aa5.06□□□□□ -1.6
USP38-203ENST00000511739 MIOXQ9UGB7 285 aa5.06□□□□□ -1.6
USP38-203ENST00000511739 WIPI2Q9Y4P8 454 aa5.06□□□□□ -1.6
USP38-203ENST00000511739 ASB1Q9Y576 335 aa5.06□□□□□ -1.6
USP38-203ENST00000511739 MYO7AQ13402 2215 aa5.06□□□□□ -1.6
USP38-203ENST00000511739 WDR81Q562E7 1941 aa5.06□□□□□ -1.6
USP38-203ENST00000511739 M0R143 59 aa5.06□□□□□ -1.6
USP38-203ENST00000511739 BCL2L11O43521 198 aa5.06□□□□□ -1.6
USP38-203ENST00000511739 HYPMO75409 117 aa5.06□□□□□ -1.6
USP38-203ENST00000511739 S1PR2O95136 353 aa5.06□□□□□ -1.6
USP38-203ENST00000511739 MC5RP33032 325 aa5.06□□□□□ -1.6
USP38-203ENST00000511739 SELENOPP49908 381 aa5.06□□□□□ -1.6
USP38-203ENST00000511739 FGF8P55075 233 aaPredicted RBP5.06□□□□□ -1.6
USP38-203ENST00000511739 ISL1P61371 349 aa5.06□□□□□ -1.6
USP38-203ENST00000511739 B4GALNT1Q00973 533 aa5.06□□□□□ -1.6
USP38-203ENST00000511739 GUK1Q16774 197 aa5.06□□□□□ -1.6
USP38-203ENST00000511739 PRSS41Q7RTY9 318 aa5.06□□□□□ -1.6
USP38-203ENST00000511739 ZNF561Q8N587 486 aa5.06□□□□□ -1.6
USP38-203ENST00000511739 ZBTB44Q8NCP5 570 aa5.06□□□□□ -1.6
USP38-203ENST00000511739 SSC4DQ8WTU2 575 aa5.06□□□□□ -1.6
USP38-203ENST00000511739 GPR35Q9HC97 309 aa5.06□□□□□ -1.6
USP38-203ENST00000511739 PHLDA3Q9Y5J5 127 aa5.06□□□□□ -1.6
USP38-203ENST00000511739 LCTP09848 1927 aa5.06□□□□□ -1.6
USP38-203ENST00000511739 F5P12259 2224 aa5.06□□□□□ -1.6
USP38-203ENST00000511739 LOC105371242A0A075B767 164 aa5.06□□□□□ -1.6
USP38-203ENST00000511739 TMEM238LA0A1B0GVL6 79 aa5.06□□□□□ -1.6
USP38-203ENST00000511739 TMEM218A2RU14 115 aa5.06□□□□□ -1.6
USP38-203ENST00000511739 A6NJY4 79 aa5.06□□□□□ -1.6
USP38-203ENST00000511739 CLDN34H7C241 214 aa5.06□□□□□ -1.6
USP38-203ENST00000511739 NDUFA2O43678 99 aa5.06□□□□□ -1.6
USP38-203ENST00000511739 RPLP1P05386 114 aaKnown RBP5.06□□□□□ -1.6
USP38-203ENST00000511739 BTF3P20290 206 aaKnown RBP5.06□□□□□ -1.6
USP38-203ENST00000511739 TSPAN7P41732 249 aa5.06□□□□□ -1.6
USP38-203ENST00000511739 AESQ08117 197 aa5.06□□□□□ -1.6
USP38-203ENST00000511739 PRICKLE4Q2TBC4 344 aa5.06□□□□□ -1.6
USP38-203ENST00000511739 SLC25A53Q5H9E4 307 aa5.06□□□□□ -1.6
USP38-203ENST00000511739 TMEM88Q6PEY1 159 aa5.06□□□□□ -1.6
USP38-203ENST00000511739 PRSS42Q7Z5A4 293 aa5.06□□□□□ -1.6
USP38-203ENST00000511739 LRP11Q86VZ4 500 aa5.06□□□□□ -1.6
USP38-203ENST00000511739 MRPL30Q8TCC3 161 aaKnown RBP5.06□□□□□ -1.6
USP38-203ENST00000511739 ASB13Q8WXK3 278 aa5.06□□□□□ -1.6
USP38-203ENST00000511739 SCNM1Q9BWG6 230 aa5.06□□□□□ -1.6
USP38-203ENST00000511739 SH3BGRL3Q9H299 93 aa5.06□□□□□ -1.6
USP38-203ENST00000511739 OR51B2Q9Y5P1 312 aa5.06□□□□□ -1.6
USP38-203ENST00000511739 A0A0A6YYJ9 748 aa5.06□□□□□ -1.6
USP38-203ENST00000511739 B4E171 279 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms