RNA–Protein interactions for RNA: ENST00000511628.1

CHD1-207, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-207ENST00000511628 CRB1P82279 1406 aa1.43□□□□□ -2.18
CHD1-207ENST00000511628 SPATA31E1Q6ZUB1 1445 aa1.43□□□□□ -2.18
CHD1-207ENST00000511628 SDHAF1A6NFY7 115 aa1.43□□□□□ -2.18
CHD1-207ENST00000511628 C17orf51A8MQB3 221 aa1.43□□□□□ -2.18
CHD1-207ENST00000511628 C9J4A7 227 aa1.43□□□□□ -2.18
CHD1-207ENST00000511628 SYNGR1O43759 233 aa1.43□□□□□ -2.18
CHD1-207ENST00000511628 RAB36O95755 333 aa1.43□□□□□ -2.18
CHD1-207ENST00000511628 GYPCP04921 128 aa1.43□□□□□ -2.18
CHD1-207ENST00000511628 ATF1P18846 271 aa1.43□□□□□ -2.18
CHD1-207ENST00000511628 PSMB6P28072 239 aa1.43□□□□□ -2.18
CHD1-207ENST00000511628 GRPRP30550 384 aa1.43□□□□□ -2.18
CHD1-207ENST00000511628 DLX6P56179 175 aa1.43□□□□□ -2.18
CHD1-207ENST00000511628 FAM3AP98173 230 aa1.43□□□□□ -2.18
CHD1-207ENST00000511628 APOFQ13790 326 aa1.43□□□□□ -2.18
CHD1-207ENST00000511628 PDGFRLQ15198 375 aa1.43□□□□□ -2.18
CHD1-207ENST00000511628 CENPWQ5EE01 88 aa1.43□□□□□ -2.18
CHD1-207ENST00000511628 SPNS3Q6ZMD2 512 aa1.43□□□□□ -2.18
CHD1-207ENST00000511628 MSRB3Q8IXL7 192 aa1.43□□□□□ -2.18
CHD1-207ENST00000511628 OR4P4Q8NGL7 312 aa1.43□□□□□ -2.18
CHD1-207ENST00000511628 OR10D4PQ8NGN7 298 aa1.43□□□□□ -2.18
CHD1-207ENST00000511628 RAD51AP1Q96B01 352 aa1.43□□□□□ -2.18
CHD1-207ENST00000511628 GPR22Q99680 433 aa1.43□□□□□ -2.18
CHD1-207ENST00000511628 NDEL1Q9GZM8 345 aa1.43□□□□□ -2.18
CHD1-207ENST00000511628 CHST5Q9GZS9 411 aa1.43□□□□□ -2.18
CHD1-207ENST00000511628 C1orf109Q9NX04 203 aa1.43□□□□□ -2.18
CHD1-207ENST00000511628 MMACHCQ9Y4U1 282 aa1.43□□□□□ -2.18
CHD1-207ENST00000511628 NLRC5Q86WI3 1866 aa1.43□□□□□ -2.18
CHD1-207ENST00000511628 PIK3R4Q99570 1358 aa1.43□□□□□ -2.18
CHD1-207ENST00000511628 ZNF407Q9C0G0 2248 aa1.43□□□□□ -2.18
CHD1-207ENST00000511628 CHD2O14647 1828 aaKnown RBP1.43□□□□□ -2.18
CHD1-207ENST00000511628 IGHV3OR15-7A0A075B7D8 119 aa1.42□□□□□ -2.18
CHD1-207ENST00000511628 FABP12A6NFH5 140 aa1.42□□□□□ -2.18
CHD1-207ENST00000511628 F5H5K5 113 aa1.42□□□□□ -2.18
CHD1-207ENST00000511628 F8VZ95 297 aa1.42□□□□□ -2.18
CHD1-207ENST00000511628 C3orf84H3BNL1 204 aa1.42□□□□□ -2.18
CHD1-207ENST00000511628 EEF1E1O43324 174 aaKnown RBP1.42□□□□□ -2.18
CHD1-207ENST00000511628 SYNGR2O43760 224 aa1.42□□□□□ -2.18
CHD1-207ENST00000511628 CALUO43852 315 aaPredicted RBP1.42□□□□□ -2.18
CHD1-207ENST00000511628 UGT2B11O75310 529 aa1.42□□□□□ -2.18
CHD1-207ENST00000511628 OPN1SWP03999 348 aa1.42□□□□□ -2.18
CHD1-207ENST00000511628 GUSBP08236 651 aa1.42□□□□□ -2.18
CHD1-207ENST00000511628 PVALBP20472 110 aaPredicted RBP1.42□□□□□ -2.18
CHD1-207ENST00000511628 ADORA1P30542 326 aa1.42□□□□□ -2.18
CHD1-207ENST00000511628 RCVRNP35243 200 aa1.42□□□□□ -2.18
CHD1-207ENST00000511628 SULT1A2P50226 295 aa1.42□□□□□ -2.18
CHD1-207ENST00000511628 CLDN12P56749 244 aa1.42□□□□□ -2.18
CHD1-207ENST00000511628 KRTAP12-4P60329 112 aa1.42□□□□□ -2.18
CHD1-207ENST00000511628 UBE2G2P60604 165 aa1.42□□□□□ -2.18
CHD1-207ENST00000511628 TNFRSF9Q07011 255 aa1.42□□□□□ -2.18
CHD1-207ENST00000511628 BSPH1Q075Z2 132 aa1.42□□□□□ -2.18
CHD1-207ENST00000511628 C4orf26Q17RF5 130 aa1.42□□□□□ -2.18
CHD1-207ENST00000511628 HENMT1Q5T8I9 393 aaKnown RBP1.42□□□□□ -2.18
CHD1-207ENST00000511628 LYZL2Q7Z4W2 148 aa1.42□□□□□ -2.18
CHD1-207ENST00000511628 MTERF4Q7Z6M4 381 aaKnown RBP1.42□□□□□ -2.18
CHD1-207ENST00000511628 DOLPP1Q86YN1 238 aa1.42□□□□□ -2.18
CHD1-207ENST00000511628 RIBC1Q8N443 379 aaPredicted RBP1.42□□□□□ -2.18
CHD1-207ENST00000511628 OR7G1Q8NGA0 311 aa1.42□□□□□ -2.18
CHD1-207ENST00000511628 OR5AK3PQ8NH89 298 aa1.42□□□□□ -2.18
CHD1-207ENST00000511628 SPPL2BQ8TCT7 592 aa1.42□□□□□ -2.18
CHD1-207ENST00000511628 TAMM41Q96BW9 452 aa1.42□□□□□ -2.18
CHD1-207ENST00000511628 ZNF514Q96K75 400 aaPredicted RBP1.42□□□□□ -2.18
CHD1-207ENST00000511628 TRNT1Q96Q11 434 aaKnown RBP1.42□□□□□ -2.18
CHD1-207ENST00000511628 OR8B2Q96RD0 313 aa1.42□□□□□ -2.18
CHD1-207ENST00000511628 ZNF251Q9BRH9 671 aa1.42□□□□□ -2.18
CHD1-207ENST00000511628 CHMP4BQ9H444 224 aaKnown RBP1.42□□□□□ -2.18
CHD1-207ENST00000511628 COMMD9Q9P000 198 aa1.42□□□□□ -2.18
CHD1-207ENST00000511628 MTCH2Q9Y6C9 303 aa1.42□□□□□ -2.18
CHD1-207ENST00000511628 BRD4O60885 1362 aaPredicted RBP1.42□□□□□ -2.18
CHD1-207ENST00000511628 MYO5BQ9ULV0 1848 aa1.42□□□□□ -2.18
CHD1-207ENST00000511628 DOCK6Q96HP0 2047 aa1.42□□□□□ -2.18
CHD1-207ENST00000511628 CLUHO75153 1309 aa1.41□□□□□ -2.18
CHD1-207ENST00000511628 TRPM3Q9HCF6 1732 aaPredicted RBP1.41□□□□□ -2.18
CHD1-207ENST00000511628 ATAD5Q96QE3 1844 aa1.41□□□□□ -2.18
CHD1-207ENST00000511628 TMEM213A2RRL7 107 aa1.41□□□□□ -2.18
CHD1-207ENST00000511628 E7EQL1 145 aa1.41□□□□□ -2.18
CHD1-207ENST00000511628 GOLGA8RI6L899 631 aa1.41□□□□□ -2.18
CHD1-207ENST00000511628 PHYHO14832 338 aa1.41□□□□□ -2.18
CHD1-207ENST00000511628 TOX3O15405 576 aaPredicted RBP1.41□□□□□ -2.18
CHD1-207ENST00000511628 PLXNB1O43157 2135 aa1.41□□□□□ -2.18
CHD1-207ENST00000511628 OR12D1P0DN82 309 aa1.41□□□□□ -2.18
CHD1-207ENST00000511628 PSKH1P11801 424 aa1.41□□□□□ -2.18
CHD1-207ENST00000511628 CTSEP14091 401 aa1.41□□□□□ -2.18
CHD1-207ENST00000511628 GABRA3P34903 492 aa1.41□□□□□ -2.18
CHD1-207ENST00000511628 SKP1P63208 163 aa1.41□□□□□ -2.18
CHD1-207ENST00000511628 TSPAN31Q12999 210 aa1.41□□□□□ -2.18
CHD1-207ENST00000511628 PAFAH1B3Q15102 231 aaKnown RBP1.41□□□□□ -2.18
CHD1-207ENST00000511628 OR8G1Q15617 311 aa1.41□□□□□ -2.18
CHD1-207ENST00000511628 PDPK2PQ6A1A2 396 aa1.41□□□□□ -2.18
CHD1-207ENST00000511628 FAM45BPQ6NSW5 357 aa1.41□□□□□ -2.18
CHD1-207ENST00000511628 NOXRED1Q6NXP6 359 aa1.41□□□□□ -2.18
CHD1-207ENST00000511628 SMARCD3Q6STE5 483 aa1.41□□□□□ -2.18
CHD1-207ENST00000511628 NIT1Q86X76 327 aa1.41□□□□□ -2.18
CHD1-207ENST00000511628 ZFAND2AQ8N6M9 145 aa1.41□□□□□ -2.18
CHD1-207ENST00000511628 TMEM75Q8N9X5 138 aa1.41□□□□□ -2.18
CHD1-207ENST00000511628 LFNGQ8NES3 379 aa1.41□□□□□ -2.18
CHD1-207ENST00000511628 ATP6V1C2Q8NEY4 427 aa1.41□□□□□ -2.18
CHD1-207ENST00000511628 CMTM2Q8TAZ6 248 aa1.41□□□□□ -2.18
CHD1-207ENST00000511628 DTD1Q8TEA8 209 aa1.41□□□□□ -2.18
CHD1-207ENST00000511628 CCDC12Q8WUD4 166 aaPredicted RBP1.41□□□□□ -2.18
CHD1-207ENST00000511628 HIST1H2BAQ96A08 127 aa1.41□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms