RNA–Protein interactions for RNA: ENST00000511604.5

CPNE4-208, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 2,503 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-208ENST00000511604 ST6GALNAC5Q9BVH7 336 aa6.31□□□□□ -1.4
CPNE4-208ENST00000511604 C11orf1Q9H5F2 150 aa6.31□□□□□ -1.4
CPNE4-208ENST00000511604 PLEKHF2Q9H8W4 249 aa6.31□□□□□ -1.4
CPNE4-208ENST00000511604 PLEKHJ1Q9NW61 149 aa6.31□□□□□ -1.4
CPNE4-208ENST00000511604 THYN1Q9P016 225 aa6.31□□□□□ -1.4
CPNE4-208ENST00000511604 CACNA1IQ9P0X4 2223 aa6.31□□□□□ -1.4
CPNE4-208ENST00000511604 GTF3C1Q12789 2109 aa6.3□□□□□ -1.4
CPNE4-208ENST00000511604 TNRC18O15417 2968 aaPredicted RBP6.3□□□□□ -1.4
CPNE4-208ENST00000511604 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.3□□□□□ -1.4
CPNE4-208ENST00000511604 C17orf51A8MQB3 221 aa6.3□□□□□ -1.4
CPNE4-208ENST00000511604 TMEM250H0YL14 139 aa6.3□□□□□ -1.4
CPNE4-208ENST00000511604 SOCS1O15524 211 aa6.3□□□□□ -1.4
CPNE4-208ENST00000511604 CST7O76096 145 aa6.3□□□□□ -1.4
CPNE4-208ENST00000511604 TTRP02766 147 aa6.3□□□□□ -1.4
CPNE4-208ENST00000511604 ERGP11308 486 aa6.3□□□□□ -1.4
CPNE4-208ENST00000511604 CEBPBP17676 345 aa6.3□□□□□ -1.4
CPNE4-208ENST00000511604 OPRM1P35372 400 aa6.3□□□□□ -1.4
CPNE4-208ENST00000511604 TIMP3P35625 211 aa6.3□□□□□ -1.4
CPNE4-208ENST00000511604 DYNLT3P51808 116 aa6.3□□□□□ -1.4
CPNE4-208ENST00000511604 ZNF133P52736 654 aaPredicted RBP6.3□□□□□ -1.4
CPNE4-208ENST00000511604 FOXL1Q12952 345 aa6.3□□□□□ -1.4
CPNE4-208ENST00000511604 ZNF154Q13106 437 aa6.3□□□□□ -1.4
CPNE4-208ENST00000511604 TMEM187Q14656 261 aa6.3□□□□□ -1.4
CPNE4-208ENST00000511604 PDGFRLQ15198 375 aa6.3□□□□□ -1.4
CPNE4-208ENST00000511604 ZNF726P1Q15940 193 aa6.3□□□□□ -1.4
CPNE4-208ENST00000511604 PMCHL1Q16048 86 aa6.3□□□□□ -1.4
CPNE4-208ENST00000511604 STUMQ69YW2 141 aa6.3□□□□□ -1.4
CPNE4-208ENST00000511604 ZNF467Q7Z7K2 595 aaPredicted RBP6.3□□□□□ -1.4
CPNE4-208ENST00000511604 TMEM52Q8NDY8 209 aa6.3□□□□□ -1.4
CPNE4-208ENST00000511604 CACNG8Q8WXS5 425 aa6.3□□□□□ -1.4
CPNE4-208ENST00000511604 LIN37Q96GY3 246 aaPredicted RBP6.3□□□□□ -1.4
CPNE4-208ENST00000511604 EAF1Q96JC9 268 aaPredicted RBP6.3□□□□□ -1.4
CPNE4-208ENST00000511604 NKX2-4Q9H2Z4 354 aa6.3□□□□□ -1.4
CPNE4-208ENST00000511604 NPVFQ9HCQ7 196 aa6.3□□□□□ -1.4
CPNE4-208ENST00000511604 TRAV9-2A0A087WT02 112 aa6.3□□□□□ -1.4
CPNE4-208ENST00000511604 C17orf112F2Z3M2 114 aa6.3□□□□□ -1.4
CPNE4-208ENST00000511604 K7EQM0 130 aa6.3□□□□□ -1.4
CPNE4-208ENST00000511604 TLX3O43711 291 aaPredicted RBP6.3□□□□□ -1.4
CPNE4-208ENST00000511604 CD5LO43866 347 aa6.3□□□□□ -1.4
CPNE4-208ENST00000511604 ZNF737O75373 536 aa6.3□□□□□ -1.4
CPNE4-208ENST00000511604 VENTXO95231 258 aa6.3□□□□□ -1.4
CPNE4-208ENST00000511604 TSPAN13O95857 204 aa6.3□□□□□ -1.4
CPNE4-208ENST00000511604 LIPFP07098 398 aa6.3□□□□□ -1.4
CPNE4-208ENST00000511604 CD1BP29016 333 aa6.3□□□□□ -1.4
CPNE4-208ENST00000511604 ECI1P42126 302 aa6.3□□□□□ -1.4
CPNE4-208ENST00000511604 NKX2-1P43699 371 aaPredicted RBP6.3□□□□□ -1.4
CPNE4-208ENST00000511604 RELBQ01201 579 aa6.3□□□□□ -1.4
CPNE4-208ENST00000511604 ZP4Q12836 540 aa6.3□□□□□ -1.4
CPNE4-208ENST00000511604 ARFRP1Q13795 201 aa6.3□□□□□ -1.4
CPNE4-208ENST00000511604 ZIC1Q15915 447 aa6.3□□□□□ -1.4
CPNE4-208ENST00000511604 NNATQ16517 81 aa6.3□□□□□ -1.4
CPNE4-208ENST00000511604 HNRNPA1L2Q32P51 320 aaKnown RBP6.3□□□□□ -1.4
CPNE4-208ENST00000511604 TMEM177Q53S58 311 aa6.3□□□□□ -1.4
CPNE4-208ENST00000511604 GTF2H5Q6ZYL4 71 aa6.3□□□□□ -1.4
CPNE4-208ENST00000511604 CPEB2Q7Z5Q1 589 aaKnown RBP6.3□□□□□ -1.4
CPNE4-208ENST00000511604 TMEM25Q86YD3 366 aa6.3□□□□□ -1.4
CPNE4-208ENST00000511604 OR2A1Q8NGT9 310 aa6.3□□□□□ -1.4
CPNE4-208ENST00000511604 NEUROG1Q92886 237 aa6.3□□□□□ -1.4
CPNE4-208ENST00000511604 IGKV1D-42A0A075B6H8 117 aa6.29□□□□□ -1.4
CPNE4-208ENST00000511604 SPAARA0A1B0GVQ0 90 aa6.29□□□□□ -1.4
CPNE4-208ENST00000511604 TMEM14DPA8MWL7 114 aa6.29□□□□□ -1.4
CPNE4-208ENST00000511604 S1PR2O95136 353 aa6.29□□□□□ -1.4
CPNE4-208ENST00000511604 NRASP01111 189 aa6.29□□□□□ -1.4
CPNE4-208ENST00000511604 KRASP01116 189 aa6.29□□□□□ -1.4
CPNE4-208ENST00000511604 C1QTNF9P0C862 333 aa6.29□□□□□ -1.4
CPNE4-208ENST00000511604 IGLL1P15814 213 aa6.29□□□□□ -1.4
CPNE4-208ENST00000511604 EN2P19622 333 aaPredicted RBP6.29□□□□□ -1.4
CPNE4-208ENST00000511604 CBLN1P23435 193 aa6.29□□□□□ -1.4
CPNE4-208ENST00000511604 CTXN1P60606 82 aa6.29□□□□□ -1.4
CPNE4-208ENST00000511604 HERV-K104P63124 156 aa6.29□□□□□ -1.4
CPNE4-208ENST00000511604 FMODQ06828 376 aa6.29□□□□□ -1.4
CPNE4-208ENST00000511604 SLC18B1Q6NT16 456 aa6.29□□□□□ -1.4
CPNE4-208ENST00000511604 CCDC144NLQ6NUI1 221 aa6.29□□□□□ -1.4
CPNE4-208ENST00000511604 LINC00114Q6XXX2 140 aa6.29□□□□□ -1.4
CPNE4-208ENST00000511604 ARHGEF39Q8N4T4 335 aa6.29□□□□□ -1.4
CPNE4-208ENST00000511604 LRTM2Q8N967 370 aa6.29□□□□□ -1.4
CPNE4-208ENST00000511604 GATSQ8NAP1 163 aa6.29□□□□□ -1.4
CPNE4-208ENST00000511604 OR10P1Q8NGE3 313 aa6.29□□□□□ -1.4
CPNE4-208ENST00000511604 OR2AE1Q8NHA4 323 aa6.29□□□□□ -1.4
CPNE4-208ENST00000511604 OTOSQ8NHW6 89 aa6.29□□□□□ -1.4
CPNE4-208ENST00000511604 SLC25A40Q8TBP6 338 aa6.29□□□□□ -1.4
CPNE4-208ENST00000511604 MRPL30Q8TCC3 161 aaKnown RBP6.29□□□□□ -1.4
CPNE4-208ENST00000511604 C18orf12Q96KH6 178 aa6.29□□□□□ -1.4
CPNE4-208ENST00000511604 SIGLEC12Q96PQ1 595 aa6.29□□□□□ -1.4
CPNE4-208ENST00000511604 CHRDL1Q9BU40 450 aa6.29□□□□□ -1.4
CPNE4-208ENST00000511604 GEMIN7Q9H840 131 aaKnown RBP6.29□□□□□ -1.4
CPNE4-208ENST00000511604 PELI2Q9HAT8 420 aa6.29□□□□□ -1.4
CPNE4-208ENST00000511604 DNAJB12Q9NXW2 375 aaKnown RBP6.29□□□□□ -1.4
CPNE4-208ENST00000511604 HHLA2Q9UM44 414 aa6.29□□□□□ -1.4
CPNE4-208ENST00000511604 HS3ST2Q9Y278 367 aa6.29□□□□□ -1.4
CPNE4-208ENST00000511604 IGKV1D-8A0A087WSZ0 117 aa6.29□□□□□ -1.4
CPNE4-208ENST00000511604 C2orf72A6NCS6 295 aa6.29□□□□□ -1.4
CPNE4-208ENST00000511604 KLRC4-KLRK1H3BQV0 150 aa6.29□□□□□ -1.4
CPNE4-208ENST00000511604 SIRPB1O00241 398 aa6.29□□□□□ -1.4
CPNE4-208ENST00000511604 SLC33A1O00400 549 aaPredicted RBP6.29□□□□□ -1.4
CPNE4-208ENST00000511604 CLEC3BP05452 202 aa6.29□□□□□ -1.4
CPNE4-208ENST00000511604 CELA3BP08861 270 aa6.29□□□□□ -1.4
CPNE4-208ENST00000511604 ATXN8OSP0DMR3 200 aa6.29□□□□□ -1.4
CPNE4-208ENST00000511604 PMCHP20382 165 aa6.29□□□□□ -1.4
CPNE4-208ENST00000511604 GUCA1AP43080 201 aaPredicted RBP6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms