RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 CDK16Q00536 496 aa2.32□□□□□ -2.04
TOPBP1-208ENST00000511439 GLO1Q04760 184 aa2.32□□□□□ -2.04
TOPBP1-208ENST00000511439 CKAP4Q07065 602 aaKnown RBP2.32□□□□□ -2.04
TOPBP1-208ENST00000511439 SAMD4BQ5PRF9 694 aaKnown RBP2.32□□□□□ -2.04
TOPBP1-208ENST00000511439 OR52E8Q6IFG1 317 aa2.32□□□□□ -2.04
TOPBP1-208ENST00000511439 C3orf33Q6P1S2 294 aa2.32□□□□□ -2.04
TOPBP1-208ENST00000511439 MBOAT1Q6ZNC8 495 aa2.32□□□□□ -2.04
TOPBP1-208ENST00000511439 LRRC74BQ6ZQY2 392 aa2.32□□□□□ -2.04
TOPBP1-208ENST00000511439 VMO1Q7Z5L0 202 aa2.32□□□□□ -2.04
TOPBP1-208ENST00000511439 MDP1Q86V88 176 aa2.32□□□□□ -2.04
TOPBP1-208ENST00000511439 ZNF695Q8IW36 515 aa2.32□□□□□ -2.04
TOPBP1-208ENST00000511439 OR2L13Q8N349 312 aa2.32□□□□□ -2.04
TOPBP1-208ENST00000511439 ATP6V1C2Q8NEY4 427 aa2.32□□□□□ -2.04
TOPBP1-208ENST00000511439 OR4F6Q8NGB9 312 aa2.32□□□□□ -2.04
TOPBP1-208ENST00000511439 OR6Q1Q8NGQ2 317 aa2.32□□□□□ -2.04
TOPBP1-208ENST00000511439 MARCH1Q8TCQ1 289 aa2.32□□□□□ -2.04
TOPBP1-208ENST00000511439 GEMIN6Q8WXD5 167 aaKnown RBP2.32□□□□□ -2.04
TOPBP1-208ENST00000511439 CHCHD10Q8WYQ3 142 aaPredicted RBP2.32□□□□□ -2.04
TOPBP1-208ENST00000511439 C11orf40Q8WZ69 217 aa2.32□□□□□ -2.04
TOPBP1-208ENST00000511439 MBOAT4Q96T53 435 aa2.32□□□□□ -2.04
TOPBP1-208ENST00000511439 CNN2Q99439 309 aaKnown RBP2.32□□□□□ -2.04
TOPBP1-208ENST00000511439 FMO2Q99518 471 aa2.32□□□□□ -2.04
TOPBP1-208ENST00000511439 SLC19A3Q9BZV2 496 aa2.32□□□□□ -2.04
TOPBP1-208ENST00000511439 TUBA4BQ9H853 241 aa2.32□□□□□ -2.04
TOPBP1-208ENST00000511439 KIF25Q9UIL4 384 aa2.32□□□□□ -2.04
TOPBP1-208ENST00000511439 BTNL2Q9UIR0 455 aa2.32□□□□□ -2.04
TOPBP1-208ENST00000511439 KPTNQ9Y664 436 aa2.32□□□□□ -2.04
TOPBP1-208ENST00000511439 DNAH5Q8TE73 4624 aa2.32□□□□□ -2.04
TOPBP1-208ENST00000511439 TANC2Q9HCD6 1990 aa2.31□□□□□ -2.04
TOPBP1-208ENST00000511439 IGKV1D-8A0A087WSZ0 117 aa2.31□□□□□ -2.04
TOPBP1-208ENST00000511439 A0A1W2PPV4 95 aa2.31□□□□□ -2.04
TOPBP1-208ENST00000511439 A0A1W2PRD5 423 aa2.31□□□□□ -2.04
TOPBP1-208ENST00000511439 A0A1W2PRF3 423 aa2.31□□□□□ -2.04
TOPBP1-208ENST00000511439 A0A1W2PRM7 423 aa2.31□□□□□ -2.04
TOPBP1-208ENST00000511439 PSMB11A5LHX3 300 aa2.31□□□□□ -2.04
TOPBP1-208ENST00000511439 LOC110117498-PIK3R3F6TDL0 507 aa2.31□□□□□ -2.04
TOPBP1-208ENST00000511439 H3BSH0 61 aa2.31□□□□□ -2.04
TOPBP1-208ENST00000511439 DCTN6O00399 190 aa2.31□□□□□ -2.04
TOPBP1-208ENST00000511439 PLPP1O14494 284 aa2.31□□□□□ -2.04
TOPBP1-208ENST00000511439 PFDN6O15212 129 aa2.31□□□□□ -2.04
TOPBP1-208ENST00000511439 ZNF780AO75290 641 aaPredicted RBP2.31□□□□□ -2.04
TOPBP1-208ENST00000511439 E2F6O75461 281 aa2.31□□□□□ -2.04
TOPBP1-208ENST00000511439 ATP5LO75964 103 aa2.31□□□□□ -2.04
TOPBP1-208ENST00000511439 OR2J3O76001 311 aa2.31□□□□□ -2.04
TOPBP1-208ENST00000511439 OXTP01178 125 aa2.31□□□□□ -2.04
TOPBP1-208ENST00000511439 MBP02144 154 aa2.31□□□□□ -2.04
TOPBP1-208ENST00000511439 C8GP07360 202 aa2.31□□□□□ -2.04
TOPBP1-208ENST00000511439 MYL2P10916 166 aa2.31□□□□□ -2.04
TOPBP1-208ENST00000511439 CPMP14384 443 aa2.31□□□□□ -2.04
TOPBP1-208ENST00000511439 CAV2P51636 162 aa2.31□□□□□ -2.04
TOPBP1-208ENST00000511439 CCNG1P51959 295 aa2.31□□□□□ -2.04
TOPBP1-208ENST00000511439 PSMD4P55036 377 aaKnown RBP2.31□□□□□ -2.04
TOPBP1-208ENST00000511439 APOC4P55056 127 aa2.31□□□□□ -2.04
TOPBP1-208ENST00000511439 ARF6P62330 175 aa2.31□□□□□ -2.04
TOPBP1-208ENST00000511439 TNFAIP6P98066 277 aaPredicted RBP2.31□□□□□ -2.04
TOPBP1-208ENST00000511439 ACVR1Q04771 509 aa2.31□□□□□ -2.04
TOPBP1-208ENST00000511439 LIPEQ05469 1076 aa2.31□□□□□ -2.04
TOPBP1-208ENST00000511439 C1orf134Q5TEV5 83 aa2.31□□□□□ -2.04
TOPBP1-208ENST00000511439 C1orf146Q5VVC0 180 aa2.31□□□□□ -2.04
TOPBP1-208ENST00000511439 KHDRBS2Q5VWX1 349 aaKnown RBP2.31□□□□□ -2.04
TOPBP1-208ENST00000511439 STUMQ69YW2 141 aa2.31□□□□□ -2.04
TOPBP1-208ENST00000511439 UQCC3Q6UW78 93 aa2.31□□□□□ -2.04
TOPBP1-208ENST00000511439 SPATA12Q7Z6I5 190 aa2.31□□□□□ -2.04
TOPBP1-208ENST00000511439 SPATA24Q86W54 205 aa2.31□□□□□ -2.04
TOPBP1-208ENST00000511439 NUDCD3Q8IVD9 361 aa2.31□□□□□ -2.04
TOPBP1-208ENST00000511439 FAM71E2Q8N5Q1 922 aa2.31□□□□□ -2.04
TOPBP1-208ENST00000511439 RHEBL1Q8TAI7 183 aa2.31□□□□□ -2.04
TOPBP1-208ENST00000511439 DEFB104AQ8WTQ1 72 aa2.31□□□□□ -2.04
TOPBP1-208ENST00000511439 C10orf82Q8WW14 230 aa2.31□□□□□ -2.04
TOPBP1-208ENST00000511439 RORBQ92753 470 aa2.31□□□□□ -2.04
TOPBP1-208ENST00000511439 NRBF2Q96F24 287 aa2.31□□□□□ -2.04
TOPBP1-208ENST00000511439 DUS3LQ96G46 650 aaKnown RBP2.31□□□□□ -2.04
TOPBP1-208ENST00000511439 SLC35E1Q96K37 410 aa2.31□□□□□ -2.04
TOPBP1-208ENST00000511439 BIRC8Q96P09 236 aa2.31□□□□□ -2.04
TOPBP1-208ENST00000511439 PARVBQ9HBI1 364 aa2.31□□□□□ -2.04
TOPBP1-208ENST00000511439 MAT2BQ9NZL9 334 aa2.31□□□□□ -2.04
TOPBP1-208ENST00000511439 CDH10Q9Y6N8 788 aa2.31□□□□□ -2.04
TOPBP1-208ENST00000511439 KBTBD11-OT1A0A1B0GTJ5 212 aa2.3□□□□□ -2.04
TOPBP1-208ENST00000511439 LGALS9O00182 355 aa2.3□□□□□ -2.04
TOPBP1-208ENST00000511439 DLGAP1O14490 977 aa2.3□□□□□ -2.04
TOPBP1-208ENST00000511439 NDUFAB1O14561 156 aa2.3□□□□□ -2.04
TOPBP1-208ENST00000511439 DYNC1I1O14576 645 aa2.3□□□□□ -2.04
TOPBP1-208ENST00000511439 RGS16O15492 202 aaPredicted RBP2.3□□□□□ -2.04
TOPBP1-208ENST00000511439 PSTPIP1O43586 416 aa2.3□□□□□ -2.04
TOPBP1-208ENST00000511439 SMC2O95347 1197 aa2.3□□□□□ -2.04
TOPBP1-208ENST00000511439 CNIH1O95406 144 aa2.3□□□□□ -2.04
TOPBP1-208ENST00000511439 RAB36O95755 333 aa2.3□□□□□ -2.04
TOPBP1-208ENST00000511439 C1GALT1C1LP0DN25 315 aa2.3□□□□□ -2.04
TOPBP1-208ENST00000511439 ZNF43P17038 809 aa2.3□□□□□ -2.04
TOPBP1-208ENST00000511439 TBPP20226 339 aa2.3□□□□□ -2.04
TOPBP1-208ENST00000511439 STOMP27105 288 aa2.3□□□□□ -2.04
TOPBP1-208ENST00000511439 DDOSTP39656 456 aa2.3□□□□□ -2.04
TOPBP1-208ENST00000511439 VHLP40337 213 aa2.3□□□□□ -2.04
TOPBP1-208ENST00000511439 SLC1A1P43005 524 aa2.3□□□□□ -2.04
TOPBP1-208ENST00000511439 CX3CR1P49238 355 aa2.3□□□□□ -2.04
TOPBP1-208ENST00000511439 MRPL19P49406 292 aaKnown RBP2.3□□□□□ -2.04
TOPBP1-208ENST00000511439 RAB13P51153 203 aa2.3□□□□□ -2.04
TOPBP1-208ENST00000511439 XKP51811 444 aa2.3□□□□□ -2.04
TOPBP1-208ENST00000511439 RAP1GDS1P52306 607 aa2.3□□□□□ -2.04
TOPBP1-208ENST00000511439 AP1S2P56377 157 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms