RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 C1QL1O75973 258 aa12.67□□□□□ -0.38
SCLT1-209ENST00000511426 IFNA2P01563 188 aa12.67□□□□□ -0.38
SCLT1-209ENST00000511426 GLIPR1P48060 266 aa12.67□□□□□ -0.38
SCLT1-209ENST00000511426 LUMP51884 338 aaPredicted RBP12.67□□□□□ -0.38
SCLT1-209ENST00000511426 SUPT4H1P63272 117 aaKnown RBP12.67□□□□□ -0.38
SCLT1-209ENST00000511426 MEF2CQ06413 473 aaPredicted RBP12.67□□□□□ -0.38
SCLT1-209ENST00000511426 SRSF4Q08170 494 aaKnown RBP12.67□□□□□ -0.38
SCLT1-209ENST00000511426 CLEC18BQ6UXF7 455 aa12.67□□□□□ -0.38
SCLT1-209ENST00000511426 ZNRF1Q8ND25 227 aa12.67□□□□□ -0.38
SCLT1-209ENST00000511426 OR5M8Q8NGP6 311 aa12.67□□□□□ -0.38
SCLT1-209ENST00000511426 RTN4IP1Q8WWV3 396 aaPredicted RBP12.67□□□□□ -0.38
SCLT1-209ENST00000511426 IL1F10Q8WWZ1 152 aa12.67□□□□□ -0.38
SCLT1-209ENST00000511426 NINJ1Q92982 152 aa12.67□□□□□ -0.38
SCLT1-209ENST00000511426 NAA60Q9H7X0 242 aa12.67□□□□□ -0.38
SCLT1-209ENST00000511426 RAB18Q9NP72 206 aa12.67□□□□□ -0.38
SCLT1-209ENST00000511426 JPT1Q9UK76 154 aa12.67□□□□□ -0.38
SCLT1-209ENST00000511426 TANC2Q9HCD6 1990 aa12.67□□□□□ -0.38
SCLT1-209ENST00000511426 TEX13DA0A0J9YY54 714 aaPredicted RBP12.67□□□□□ -0.38
SCLT1-209ENST00000511426 TNFRSF13BO14836 293 aaPredicted RBP12.67□□□□□ -0.38
SCLT1-209ENST00000511426 HBZP02008 142 aa12.67□□□□□ -0.38
SCLT1-209ENST00000511426 RBMXP38159 391 aaKnown RBP12.67□□□□□ -0.38
SCLT1-209ENST00000511426 GZMKP49863 264 aa12.67□□□□□ -0.38
SCLT1-209ENST00000511426 HOXA4Q00056 320 aaPredicted RBP12.67□□□□□ -0.38
SCLT1-209ENST00000511426 FAM201AQ5SY85 155 aa12.67□□□□□ -0.38
SCLT1-209ENST00000511426 ZBTB34Q8NCN2 500 aa12.67□□□□□ -0.38
SCLT1-209ENST00000511426 OR10V1Q8NGI7 309 aa12.67□□□□□ -0.38
SCLT1-209ENST00000511426 CORO2AQ92828 525 aa12.67□□□□□ -0.38
SCLT1-209ENST00000511426 TMPRSS13Q9BYE2 586 aa12.67□□□□□ -0.38
SCLT1-209ENST00000511426 HIVEP3Q5T1R4 2406 aa12.66□□□□□ -0.38
SCLT1-209ENST00000511426 TRGV10A0A0A0MS01 117 aa12.66□□□□□ -0.38
SCLT1-209ENST00000511426 A8MV72 311 aaPredicted RBP12.66□□□□□ -0.38
SCLT1-209ENST00000511426 C19orf84I3L1E1 186 aa12.66□□□□□ -0.38
SCLT1-209ENST00000511426 F2RL2O00254 374 aa12.66□□□□□ -0.38
SCLT1-209ENST00000511426 GOSR2O14653 212 aa12.66□□□□□ -0.38
SCLT1-209ENST00000511426 GPR37O15354 613 aa12.66□□□□□ -0.38
SCLT1-209ENST00000511426 GYPAP02724 150 aa12.66□□□□□ -0.38
SCLT1-209ENST00000511426 GNRHRP30968 328 aa12.66□□□□□ -0.38
SCLT1-209ENST00000511426 CYCSP99999 105 aaKnown RBP12.66□□□□□ -0.38
SCLT1-209ENST00000511426 FGL1Q08830 312 aa12.66□□□□□ -0.38
SCLT1-209ENST00000511426 EDDM3AQ14507 147 aa12.66□□□□□ -0.38
SCLT1-209ENST00000511426 MEX3BQ6ZN04 569 aaKnown RBP12.66□□□□□ -0.38
SCLT1-209ENST00000511426 LDLRAD3Q86YD5 345 aa12.66□□□□□ -0.38
SCLT1-209ENST00000511426 LRTM2Q8N967 370 aa12.66□□□□□ -0.38
SCLT1-209ENST00000511426 BVESQ8NE79 360 aa12.66□□□□□ -0.38
SCLT1-209ENST00000511426 OR13A1Q8NGR1 328 aa12.66□□□□□ -0.38
SCLT1-209ENST00000511426 MRGPRDQ8TDS7 321 aa12.66□□□□□ -0.38
SCLT1-209ENST00000511426 EDARADDQ8WWZ3 215 aa12.66□□□□□ -0.38
SCLT1-209ENST00000511426 SLC5A7Q9GZV3 580 aa12.66□□□□□ -0.38
SCLT1-209ENST00000511426 LINC00574Q9H8X3 128 aa12.66□□□□□ -0.38
SCLT1-209ENST00000511426 RDH8Q9NYR8 311 aa12.66□□□□□ -0.38
SCLT1-209ENST00000511426 CACNA1BQ00975 2339 aa12.65□□□□□ -0.38
SCLT1-209ENST00000511426 hADV38S2A0JD32 116 aa12.65□□□□□ -0.38
SCLT1-209ENST00000511426 C15orf65H3BRN8 121 aa12.65□□□□□ -0.38
SCLT1-209ENST00000511426 ITGB1BP1O14713 200 aa12.65□□□□□ -0.38
SCLT1-209ENST00000511426 TMPRSS2O15393 492 aa12.65□□□□□ -0.38
SCLT1-209ENST00000511426 CD8AP01732 235 aa12.65□□□□□ -0.38
SCLT1-209ENST00000511426 PRB1P04280 392 aa12.65□□□□□ -0.38
SCLT1-209ENST00000511426 PI3P19957 117 aa12.65□□□□□ -0.38
SCLT1-209ENST00000511426 EDDM3BP56851 147 aa12.65□□□□□ -0.38
SCLT1-209ENST00000511426 LRRC10Q5BKY1 277 aa12.65□□□□□ -0.38
SCLT1-209ENST00000511426 LY6G6FQ5SQ64 297 aa12.65□□□□□ -0.38
SCLT1-209ENST00000511426 UXS1Q8NBZ7 420 aa12.65□□□□□ -0.38
SCLT1-209ENST00000511426 DEFB108BQ8NET1 73 aa12.65□□□□□ -0.38
SCLT1-209ENST00000511426 OR10A7Q8NGE5 316 aa12.65□□□□□ -0.38
SCLT1-209ENST00000511426 CASTOR1Q8WTX7 329 aa12.65□□□□□ -0.38
SCLT1-209ENST00000511426 SECTM1Q8WVN6 248 aa12.65□□□□□ -0.38
SCLT1-209ENST00000511426 ARL11Q969Q4 196 aa12.65□□□□□ -0.38
SCLT1-209ENST00000511426 CCL13Q99616 98 aa12.65□□□□□ -0.38
SCLT1-209ENST00000511426 TAS2R3Q9NYW6 316 aa12.65□□□□□ -0.38
SCLT1-209ENST00000511426 UBE2J1Q9Y385 318 aaPredicted RBP12.65□□□□□ -0.38
SCLT1-209ENST00000511426 LINC00312Q9Y6C7 94 aa12.65□□□□□ -0.38
SCLT1-209ENST00000511426 DIDO1Q9BTC0 2240 aaKnown RBP12.65□□□□□ -0.38
SCLT1-209ENST00000511426 ZNF729A6NN14 1252 aaPredicted RBP12.64□□□□□ -0.39
SCLT1-209ENST00000511426 MPPED1O15442 326 aa12.64□□□□□ -0.39
SCLT1-209ENST00000511426 RP2O75695 350 aa12.64□□□□□ -0.39
SCLT1-209ENST00000511426 CGB3P0DN86 165 aa12.64□□□□□ -0.39
SCLT1-209ENST00000511426 CGB7P0DN87 165 aa12.64□□□□□ -0.39
SCLT1-209ENST00000511426 PRR18Q8N4B5 295 aa12.64□□□□□ -0.39
SCLT1-209ENST00000511426 DRAXINQ8NBI3 349 aaPredicted RBP12.64□□□□□ -0.39
SCLT1-209ENST00000511426 PIPOXQ9P0Z9 390 aa12.64□□□□□ -0.39
SCLT1-209ENST00000511426 OR1A1Q9P1Q5 309 aa12.64□□□□□ -0.39
SCLT1-209ENST00000511426 SLC25A10Q9UBX3 287 aaPredicted RBP12.64□□□□□ -0.39
SCLT1-209ENST00000511426 DYSFO75923 2080 aa12.64□□□□□ -0.39
SCLT1-209ENST00000511426 NDUFB3O43676 98 aa12.64□□□□□ -0.39
SCLT1-209ENST00000511426 YPEL1O60688 119 aa12.64□□□□□ -0.39
SCLT1-209ENST00000511426 SOD3P08294 240 aa12.64□□□□□ -0.39
SCLT1-209ENST00000511426 CEACAM6P40199 344 aa12.64□□□□□ -0.39
SCLT1-209ENST00000511426 H2BFSP57053 126 aa12.64□□□□□ -0.39
SCLT1-209ENST00000511426 TLE4Q04727 773 aa12.64□□□□□ -0.39
SCLT1-209ENST00000511426 NLRC3Q7RTR2 1065 aa12.64□□□□□ -0.39
SCLT1-209ENST00000511426 TGIF2LYQ8IUE0 185 aa12.64□□□□□ -0.39
SCLT1-209ENST00000511426 OR52M1Q8NGK5 317 aa12.64□□□□□ -0.39
SCLT1-209ENST00000511426 OR2T35Q8NGX2 323 aa12.64□□□□□ -0.39
SCLT1-209ENST00000511426 OR1L1Q8NH94 360 aa12.64□□□□□ -0.39
SCLT1-209ENST00000511426 TIMD4Q96H15 378 aa12.64□□□□□ -0.39
SCLT1-209ENST00000511426 DMRTB1Q96MA1 342 aa12.64□□□□□ -0.39
SCLT1-209ENST00000511426 YPEL2Q96QA6 119 aa12.64□□□□□ -0.39
SCLT1-209ENST00000511426 DCAF16Q9NXF7 216 aa12.64□□□□□ -0.39
SCLT1-209ENST00000511426 CALYQ9NYX4 217 aa12.64□□□□□ -0.39
SCLT1-209ENST00000511426 IGKV1D-13A0A0B4J2D9 117 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms